RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 CMASQ8NFW8 434 aaPredicted RBP17.52■□□□□ 0.4
CCDC43-202ENST00000457422 UBA3Q8TBC4 463 aa17.52■□□□□ 0.4
CCDC43-202ENST00000457422 TTC25Q96NG3 672 aa17.52■□□□□ 0.4
CCDC43-202ENST00000457422 TINF2Q9BSI4 451 aa17.52■□□□□ 0.4
CCDC43-202ENST00000457422 MIS12Q9H081 205 aa17.52■□□□□ 0.4
CCDC43-202ENST00000457422 EURLQ9NYK6 297 aa17.52■□□□□ 0.4
CCDC43-202ENST00000457422 SHOC2Q9UQ13 582 aa17.52■□□□□ 0.4
CCDC43-202ENST00000457422 RRN3P2A6NIE6 340 aa17.52■□□□□ 0.39
CCDC43-202ENST00000457422 CDH16O75309 829 aa17.52■□□□□ 0.39
CCDC43-202ENST00000457422 PSMC4P43686 418 aa17.52■□□□□ 0.39
CCDC43-202ENST00000457422 MYO1EQ12965 1108 aa17.52■□□□□ 0.39
CCDC43-202ENST00000457422 KIZQ2M2Z5 673 aa17.52■□□□□ 0.39
CCDC43-202ENST00000457422 KCNT1Q5JUK3 1230 aa17.52■□□□□ 0.39
CCDC43-202ENST00000457422 RNASEH2BQ5TBB1 312 aaKnown RBP17.52■□□□□ 0.39
CCDC43-202ENST00000457422 APBB1IPQ7Z5R6 666 aaPredicted RBP17.52■□□□□ 0.39
CCDC43-202ENST00000457422 RIBC1Q8N443 379 aaPredicted RBP17.52■□□□□ 0.39
CCDC43-202ENST00000457422 SEC16BQ96JE7 1060 aa17.52■□□□□ 0.39
CCDC43-202ENST00000457422 CCDC77Q9BR77 488 aa17.52■□□□□ 0.39
CCDC43-202ENST00000457422 NT5C1AQ9BXI3 368 aa17.52■□□□□ 0.39
CCDC43-202ENST00000457422 ASNSD1Q9NWL6 643 aa17.52■□□□□ 0.39
CCDC43-202ENST00000457422 RNF8O76064 485 aa17.51■□□□□ 0.39
CCDC43-202ENST00000457422 NPTXRO95502 500 aa17.51■□□□□ 0.39
CCDC43-202ENST00000457422 ZNF143P52747 638 aaPredicted RBP17.51■□□□□ 0.39
CCDC43-202ENST00000457422 DYNLT1P63172 113 aa17.51■□□□□ 0.39
CCDC43-202ENST00000457422 FKBP1BP68106 108 aa17.51■□□□□ 0.39
CCDC43-202ENST00000457422 CDC42EP1Q00587 391 aa17.51■□□□□ 0.39
CCDC43-202ENST00000457422 OTUD4Q01804 1114 aaKnown RBP17.51■□□□□ 0.39
CCDC43-202ENST00000457422 FAM110CQ1W6H9 321 aa17.51■□□□□ 0.39
CCDC43-202ENST00000457422 GKAP1Q5VSY0 366 aaPredicted RBP17.51■□□□□ 0.39
CCDC43-202ENST00000457422 CPLX4Q7Z7G2 160 aa17.51■□□□□ 0.39
CCDC43-202ENST00000457422 ACTL9Q8TC94 416 aa17.51■□□□□ 0.39
CCDC43-202ENST00000457422 C9orf72Q96LT7 481 aa17.51■□□□□ 0.39
CCDC43-202ENST00000457422 CFAP57Q96MR6 1250 aa17.51■□□□□ 0.39
CCDC43-202ENST00000457422 TMEM121Q9BTD3 319 aa17.51■□□□□ 0.39
CCDC43-202ENST00000457422 PHACTR1Q9C0D0 580 aa17.51■□□□□ 0.39
CCDC43-202ENST00000457422 CXCL16Q9H2A7 254 aa17.51■□□□□ 0.39
CCDC43-202ENST00000457422 ADAMTS10Q9H324 1103 aa17.51■□□□□ 0.39
CCDC43-202ENST00000457422 SETD4Q9NVD3 440 aa17.51■□□□□ 0.39
CCDC43-202ENST00000457422 CTNNAL1Q9UBT7 734 aa17.51■□□□□ 0.39
CCDC43-202ENST00000457422 SCN1AP35498 2009 aa17.51■□□□□ 0.39
CCDC43-202ENST00000457422 PDCD11Q14690 1871 aaKnown RBP17.51■□□□□ 0.39
CCDC43-202ENST00000457422 CST8O60676 142 aa17.51■□□□□ 0.39
CCDC43-202ENST00000457422 TRUB2O95900 331 aaKnown RBP17.51■□□□□ 0.39
CCDC43-202ENST00000457422 PECAM1P16284 738 aaPredicted RBP17.51■□□□□ 0.39
CCDC43-202ENST00000457422 MIPP30301 263 aa17.51■□□□□ 0.39
CCDC43-202ENST00000457422 TMEM62Q0P6H9 643 aa17.51■□□□□ 0.39
CCDC43-202ENST00000457422 PCBP1Q15365 356 aaKnown RBP eCLIP17.51■□□□□ 0.39
CCDC43-202ENST00000457422 FAM102AQ5T9C2 384 aaPredicted RBP17.51■□□□□ 0.39
CCDC43-202ENST00000457422 VSTM1Q6UX27 236 aa17.51■□□□□ 0.39
CCDC43-202ENST00000457422 PLEKHH3Q7Z736 793 aa17.51■□□□□ 0.39
CCDC43-202ENST00000457422 PCGF5Q86SE9 256 aa17.51■□□□□ 0.39
CCDC43-202ENST00000457422 CACNA2D3Q8IZS8 1091 aa17.51■□□□□ 0.39
CCDC43-202ENST00000457422 OTUD6BQ8N6M0 293 aa17.51■□□□□ 0.39
CCDC43-202ENST00000457422 NPLOC4Q8TAT6 608 aa17.51■□□□□ 0.39
CCDC43-202ENST00000457422 PARK7Q99497 189 aaKnown RBP17.51■□□□□ 0.39
CCDC43-202ENST00000457422 FAM49AQ9H0Q0 323 aaPredicted RBP17.51■□□□□ 0.39
CCDC43-202ENST00000457422 TSPAN16Q9UKR8 245 aa17.51■□□□□ 0.39
CCDC43-202ENST00000457422 USP18Q9UMW8 372 aa17.51■□□□□ 0.39
CCDC43-202ENST00000457422 ACTL7BQ9Y614 415 aa17.51■□□□□ 0.39
CCDC43-202ENST00000457422 SGK1O00141 431 aa17.5■□□□□ 0.39
CCDC43-202ENST00000457422 ENDOD1O94919 500 aa17.5■□□□□ 0.39
CCDC43-202ENST00000457422 HOXA11P31270 313 aaPredicted RBP17.5■□□□□ 0.39
CCDC43-202ENST00000457422 PPP1R13LQ8WUF5 828 aa17.5■□□□□ 0.39
CCDC43-202ENST00000457422 SNX27Q96L92 541 aa17.5■□□□□ 0.39
CCDC43-202ENST00000457422 CNPY3Q9BT09 278 aa17.5■□□□□ 0.39
CCDC43-202ENST00000457422 SAYSD1Q9NPB0 183 aa17.5■□□□□ 0.39
CCDC43-202ENST00000457422 PCSK1NQ9UHG2 260 aa17.5■□□□□ 0.39
CCDC43-202ENST00000457422 GINS2Q9Y248 185 aa17.5■□□□□ 0.39
CCDC43-202ENST00000457422 FARP1Q9Y4F1 1045 aaPredicted RBP17.5■□□□□ 0.39
CCDC43-202ENST00000457422 C2CD4BA6NLJ0 364 aa17.49■□□□□ 0.39
CCDC43-202ENST00000457422 APOC4-APOC2K7ER74 178 aa17.49■□□□□ 0.39
CCDC43-202ENST00000457422 APOC2P02655 101 aa17.49■□□□□ 0.39
CCDC43-202ENST00000457422 PFKMP08237 780 aa17.49■□□□□ 0.39
CCDC43-202ENST00000457422 CD48P09326 243 aa17.49■□□□□ 0.39
CCDC43-202ENST00000457422 GPD1P21695 349 aa17.49■□□□□ 0.39
CCDC43-202ENST00000457422 PLCB3Q01970 1234 aa17.49■□□□□ 0.39
CCDC43-202ENST00000457422 IFT88Q13099 833 aa17.49■□□□□ 0.39
CCDC43-202ENST00000457422 IRF5Q13568 498 aa17.49■□□□□ 0.39
CCDC43-202ENST00000457422 SLC27A1Q6PCB7 646 aa17.49■□□□□ 0.39
CCDC43-202ENST00000457422 PRCCQ92733 491 aaPredicted RBP17.49■□□□□ 0.39
CCDC43-202ENST00000457422 PRMT1Q99873 361 aaKnown RBP17.49■□□□□ 0.39
CCDC43-202ENST00000457422 GCOM2Q9BZD3 368 aaPredicted RBP17.49■□□□□ 0.39
CCDC43-202ENST00000457422 SNTG2Q9NY99 539 aa17.49■□□□□ 0.39
CCDC43-202ENST00000457422 SAE1Q9UBE0 346 aaPredicted RBP17.49■□□□□ 0.39
CCDC43-202ENST00000457422 PIK3R2O00459 728 aa17.49■□□□□ 0.39
CCDC43-202ENST00000457422 PPEF2O14830 753 aa17.49■□□□□ 0.39
CCDC43-202ENST00000457422 ALOX15BO15296 676 aa17.49■□□□□ 0.39
CCDC43-202ENST00000457422 GPR32O75388 356 aa17.49■□□□□ 0.39
CCDC43-202ENST00000457422 PDE4CQ08493 712 aa17.49■□□□□ 0.39
CCDC43-202ENST00000457422 TAF5Q15542 800 aa17.49■□□□□ 0.39
CCDC43-202ENST00000457422 ZBTB6Q15916 424 aa17.49■□□□□ 0.39
CCDC43-202ENST00000457422 GOLGA7BQ2TAP0 167 aa17.49■□□□□ 0.39
CCDC43-202ENST00000457422 PKDCCQ504Y2 493 aa17.49■□□□□ 0.39
CCDC43-202ENST00000457422 TDRPQ86YL5 185 aa17.49■□□□□ 0.39
CCDC43-202ENST00000457422 KCTD6Q8NC69 237 aa17.49■□□□□ 0.39
CCDC43-202ENST00000457422 CABS1Q96KC9 395 aa17.49■□□□□ 0.39
CCDC43-202ENST00000457422 PTPN18Q99952 460 aa17.49■□□□□ 0.39
CCDC43-202ENST00000457422 RSAD1Q9HA92 442 aa17.49■□□□□ 0.39
CCDC43-202ENST00000457422 GBA2Q9HCG7 927 aaPredicted RBP17.49■□□□□ 0.39
CCDC43-202ENST00000457422 NAALADL1Q9UQQ1 740 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms