RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 TWF1Q12792 350 aa10.7□□□□□ -0.7
ATG4A-206ENST00000457035 ORC1Q13415 861 aa10.7□□□□□ -0.7
ATG4A-206ENST00000457035 CBX2Q14781 532 aaPredicted RBP10.7□□□□□ -0.7
ATG4A-206ENST00000457035 MDH1BQ5I0G3 518 aa10.7□□□□□ -0.7
ATG4A-206ENST00000457035 LRSAM1Q6UWE0 723 aa10.7□□□□□ -0.7
ATG4A-206ENST00000457035 C4orf50Q6ZRC1 276 aa10.7□□□□□ -0.7
ATG4A-206ENST00000457035 RRAGAQ7L523 313 aa10.7□□□□□ -0.7
ATG4A-206ENST00000457035 GJD3Q8N144 294 aa10.7□□□□□ -0.7
ATG4A-206ENST00000457035 PPM1KQ8N3J5 372 aa10.7□□□□□ -0.7
ATG4A-206ENST00000457035 TTC39CQ8N584 583 aa10.7□□□□□ -0.7
ATG4A-206ENST00000457035 C12orf29Q8N999 325 aa10.7□□□□□ -0.7
ATG4A-206ENST00000457035 MYLPFQ96A32 169 aa10.7□□□□□ -0.7
ATG4A-206ENST00000457035 TNIP3Q96KP6 325 aa10.7□□□□□ -0.7
ATG4A-206ENST00000457035 RIPOR3Q96MK2 946 aa10.7□□□□□ -0.7
ATG4A-206ENST00000457035 KREMEN1Q96MU8 473 aa10.7□□□□□ -0.7
ATG4A-206ENST00000457035 NECTIN4Q96NY8 510 aa10.7□□□□□ -0.7
ATG4A-206ENST00000457035 NT5C1AQ9BXI3 368 aa10.7□□□□□ -0.7
ATG4A-206ENST00000457035 B3GNT5Q9BYG0 378 aa10.7□□□□□ -0.7
ATG4A-206ENST00000457035 POMKQ9H5K3 350 aa10.7□□□□□ -0.7
ATG4A-206ENST00000457035 WDR6Q9NNW5 1121 aaKnown RBP10.7□□□□□ -0.7
ATG4A-206ENST00000457035 SIX2Q9NPC8 291 aa10.7□□□□□ -0.7
ATG4A-206ENST00000457035 C11orf16Q9NQ32 467 aa10.7□□□□□ -0.7
ATG4A-206ENST00000457035 HCFC1R1Q9NWW0 138 aa10.7□□□□□ -0.7
ATG4A-206ENST00000457035 GCNT4Q9P109 453 aa10.7□□□□□ -0.7
ATG4A-206ENST00000457035 YIPF1Q9Y548 306 aa10.7□□□□□ -0.7
ATG4A-206ENST00000457035 BECN2A8MW95 431 aa10.69□□□□□ -0.7
ATG4A-206ENST00000457035 RNF225M0QZC1 329 aaPredicted RBP10.69□□□□□ -0.7
ATG4A-206ENST00000457035 CLDN5O00501 218 aa10.69□□□□□ -0.7
ATG4A-206ENST00000457035 XYLBO75191 536 aa10.69□□□□□ -0.7
ATG4A-206ENST00000457035 LRG1P02750 347 aa10.69□□□□□ -0.7
ATG4A-206ENST00000457035 PTPN2P17706 415 aa10.69□□□□□ -0.7
ATG4A-206ENST00000457035 ATF6P18850 670 aa10.69□□□□□ -0.7
ATG4A-206ENST00000457035 BDNFP23560 247 aa10.69□□□□□ -0.7
ATG4A-206ENST00000457035 ALDH1A3P47895 512 aa10.69□□□□□ -0.7
ATG4A-206ENST00000457035 GPR15P49685 360 aa10.69□□□□□ -0.7
ATG4A-206ENST00000457035 NTHL1P78549 312 aa10.69□□□□□ -0.7
ATG4A-206ENST00000457035 CYP27A1Q02318 531 aa10.69□□□□□ -0.7
ATG4A-206ENST00000457035 DDR2Q16832 855 aa10.69□□□□□ -0.7
ATG4A-206ENST00000457035 MGAT5BQ3V5L5 792 aa10.69□□□□□ -0.7
ATG4A-206ENST00000457035 ZNF394Q53GI3 561 aa10.69□□□□□ -0.7
ATG4A-206ENST00000457035 GJB7Q6PEY0 223 aa10.69□□□□□ -0.7
ATG4A-206ENST00000457035 VSTM1Q6UX27 236 aa10.69□□□□□ -0.7
ATG4A-206ENST00000457035 GRASPQ7Z6J2 395 aaPredicted RBP10.69□□□□□ -0.7
ATG4A-206ENST00000457035 DNAJB7Q7Z6W7 309 aaPredicted RBP10.69□□□□□ -0.7
ATG4A-206ENST00000457035 LUZP1Q86V48 1076 aa10.69□□□□□ -0.7
ATG4A-206ENST00000457035 SPATA2LQ8IUW3 424 aaPredicted RBP10.69□□□□□ -0.7
ATG4A-206ENST00000457035 FUKQ8N0W3 1084 aa10.69□□□□□ -0.7
ATG4A-206ENST00000457035 SLC4A11Q8NBS3 891 aa10.69□□□□□ -0.7
ATG4A-206ENST00000457035 JAKMIP2Q96AA8 810 aa10.69□□□□□ -0.7
ATG4A-206ENST00000457035 TMEM176AQ96HP8 235 aa10.69□□□□□ -0.7
ATG4A-206ENST00000457035 ZNF512Q96ME7 567 aaPredicted RBP10.69□□□□□ -0.7
ATG4A-206ENST00000457035 SEPT5Q99719 369 aaPredicted RBP10.69□□□□□ -0.7
ATG4A-206ENST00000457035 PHF7Q9BWX1 381 aaPredicted RBP10.69□□□□□ -0.7
ATG4A-206ENST00000457035 LRRC3Q9BY71 257 aa10.69□□□□□ -0.7
ATG4A-206ENST00000457035 PIDD1Q9HB75 910 aa10.69□□□□□ -0.7
ATG4A-206ENST00000457035 UBE2TQ9NPD8 197 aaPredicted RBP10.69□□□□□ -0.7
ATG4A-206ENST00000457035 AVENQ9NQS1 362 aaPredicted RBP10.69□□□□□ -0.7
ATG4A-206ENST00000457035 TMEM30AQ9NV96 361 aa10.69□□□□□ -0.7
ATG4A-206ENST00000457035 CNTN6Q9UQ52 1028 aa10.69□□□□□ -0.7
ATG4A-206ENST00000457035 FAM50BQ9Y247 325 aa10.69□□□□□ -0.7
ATG4A-206ENST00000457035 ASB3Q9Y575 518 aa10.69□□□□□ -0.7
ATG4A-206ENST00000457035 OBSL1O75147 1896 aa10.68□□□□□ -0.7
ATG4A-206ENST00000457035 PI4K2BG5E9Z4 385 aa10.68□□□□□ -0.7
ATG4A-206ENST00000457035 PES1O00541 588 aaKnown RBP10.68□□□□□ -0.7
ATG4A-206ENST00000457035 GPR37L1O60883 481 aa10.68□□□□□ -0.7
ATG4A-206ENST00000457035 HMGA1P17096 107 aaKnown RBP10.68□□□□□ -0.7
ATG4A-206ENST00000457035 CACNA2D1P54289 1103 aa10.68□□□□□ -0.7
ATG4A-206ENST00000457035 EPHB3P54753 998 aa10.68□□□□□ -0.7
ATG4A-206ENST00000457035 EPHA5P54756 1037 aa10.68□□□□□ -0.7
ATG4A-206ENST00000457035 ZNF445P59923 1031 aa10.68□□□□□ -0.7
ATG4A-206ENST00000457035 YWHAEP62258 255 aaKnown RBP10.68□□□□□ -0.7
ATG4A-206ENST00000457035 PLD1Q13393 1074 aa10.68□□□□□ -0.7
ATG4A-206ENST00000457035 SDHAF4Q5VUM1 108 aa10.68□□□□□ -0.7
ATG4A-206ENST00000457035 TMEM270Q6UE05 265 aa10.68□□□□□ -0.7
ATG4A-206ENST00000457035 ANKRD20A12PQ8NF67 263 aa10.68□□□□□ -0.7
ATG4A-206ENST00000457035 FAM200AQ8TCP9 573 aa10.68□□□□□ -0.7
ATG4A-206ENST00000457035 GPR152Q8TDT2 470 aa10.68□□□□□ -0.7
ATG4A-206ENST00000457035 PSMG2Q969U7 264 aa10.68□□□□□ -0.7
ATG4A-206ENST00000457035 CYFIP2Q96F07 1278 aa10.68□□□□□ -0.7
ATG4A-206ENST00000457035 HEXIM2Q96MH2 286 aaKnown RBP10.68□□□□□ -0.7
ATG4A-206ENST00000457035 HNRNPABQ99729 332 aaKnown RBP10.68□□□□□ -0.7
ATG4A-206ENST00000457035 ZNF518BQ9C0D4 1074 aa10.68□□□□□ -0.7
ATG4A-206ENST00000457035 APEX2Q9UBZ4 518 aa10.68□□□□□ -0.7
ATG4A-206ENST00000457035 PRKAG3Q9UGI9 489 aa10.68□□□□□ -0.7
ATG4A-206ENST00000457035 PCDHB4Q9Y5E5 795 aa10.68□□□□□ -0.7
ATG4A-206ENST00000457035 TRIOO75962 3097 aa10.68□□□□□ -0.7
ATG4A-206ENST00000457035 LGALS16A8MUM7 142 aa10.67□□□□□ -0.7
ATG4A-206ENST00000457035 NRG2O14511 850 aaPredicted RBP10.67□□□□□ -0.7
ATG4A-206ENST00000457035 TEX33O43247 280 aa10.67□□□□□ -0.7
ATG4A-206ENST00000457035 MOSPD3O75425 235 aa10.67□□□□□ -0.7
ATG4A-206ENST00000457035 BEST1O76090 585 aa10.67□□□□□ -0.7
ATG4A-206ENST00000457035 NOL4O94818 638 aa10.67□□□□□ -0.7
ATG4A-206ENST00000457035 RHOP08100 348 aa10.67□□□□□ -0.7
ATG4A-206ENST00000457035 CCDC130P13994 396 aa10.67□□□□□ -0.7
ATG4A-206ENST00000457035 GRIK1P39086 918 aa10.67□□□□□ -0.7
ATG4A-206ENST00000457035 CCR2P41597 374 aa10.67□□□□□ -0.7
ATG4A-206ENST00000457035 ZNF132P52740 706 aa10.67□□□□□ -0.7
ATG4A-206ENST00000457035 MFAP3P55082 362 aa10.67□□□□□ -0.7
ATG4A-206ENST00000457035 RPL10AP62906 217 aaKnown RBP10.67□□□□□ -0.7
ATG4A-206ENST00000457035 SLC5A9Q2M3M2 681 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms