RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 JDP2Q8WYK2 163 aa5.2□□□□□ -1.58
PCDH9-203ENST00000456367 ITPKCQ96DU7 683 aa5.2□□□□□ -1.58
PCDH9-203ENST00000456367 ZNF333Q96JL9 665 aa5.2□□□□□ -1.58
PCDH9-203ENST00000456367 QKIQ96PU8 341 aaKnown RBP eCLIP5.2□□□□□ -1.582e-6■■■■■ 38
PCDH9-203ENST00000456367 THAP2Q9H0W7 228 aa5.2□□□□□ -1.58
PCDH9-203ENST00000456367 RAB6BQ9NRW1 208 aa5.2□□□□□ -1.58
PCDH9-203ENST00000456367 FBXO28Q9NVF7 368 aa5.2□□□□□ -1.58
PCDH9-203ENST00000456367 KLHL8Q9P2G9 620 aaPredicted RBP5.2□□□□□ -1.58
PCDH9-203ENST00000456367 STOML2Q9UJZ1 356 aa5.2□□□□□ -1.58
PCDH9-203ENST00000456367 PNMA3Q9UL41 463 aa5.2□□□□□ -1.58
PCDH9-203ENST00000456367 PSMD13Q9UNM6 376 aa5.2□□□□□ -1.58
PCDH9-203ENST00000456367 DNAJC16Q9Y2G8 782 aa5.2□□□□□ -1.58
PCDH9-203ENST00000456367 SIK3Q9Y2K2 1263 aa5.2□□□□□ -1.58
PCDH9-203ENST00000456367 USP20Q9Y2K6 914 aa5.2□□□□□ -1.58
PCDH9-203ENST00000456367 TPRKBQ9Y3C4 175 aa5.2□□□□□ -1.58
PCDH9-203ENST00000456367 CNTNAP5Q8WYK1 1306 aa5.2□□□□□ -1.58
PCDH9-203ENST00000456367 PI4K2BG5E9Z4 385 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 BGNP21810 368 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 SDC4P31431 198 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 DYNLL1P63167 89 aaKnown RBP5.19□□□□□ -1.58
PCDH9-203ENST00000456367 CERKLQ49MI3 558 aaPredicted RBP5.19□□□□□ -1.58
PCDH9-203ENST00000456367 WDR59Q6PJI9 974 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 USP17L2Q6R6M4 530 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 PADI6Q6TGC4 694 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 PRR23BQ6ZRT6 265 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 ATG9AQ7Z3C6 839 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 RASGEF1CQ8N431 466 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 SFRP1Q8N474 314 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 FEZF2Q8TBJ5 459 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 TBC1D16Q8TBP0 767 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 SUN5Q8TC36 379 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 TCP10LQ8TDR4 215 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 FAXDC2Q96IV6 333 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 GCNAQ96QF7 691 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 SEMA6BQ9H3T3 888 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 COG4Q9H9E3 785 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 SELENONQ9NZV5 590 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 LNPEPQ9UIQ6 1025 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 FLT1P17948 1338 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 USP31Q70CQ4 1352 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 CDC42BPGQ6DT37 1551 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 C15orf38-AP3S2A0A0A6YYH1 394 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 LRRIQ4A6NIV6 560 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 CENPXA8MT69 81 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 TIMM44O43615 452 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 TM7SF2O76062 418 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 ADAMTS2O95450 1211 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 SERPINA6P08185 405 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 RALBP11234 206 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 CD58P19256 250 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 FDFT1P37268 417 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 GALK1P51570 392 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 RAB25P57735 213 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 CHRNB3Q05901 458 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 TRAF2Q12933 501 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 EPHA7Q15375 998 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 NTRK3Q16288 839 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 FASTKD1Q53R41 847 aaKnown RBP5.19□□□□□ -1.58
PCDH9-203ENST00000456367 ZNF667Q5HYK9 610 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 ARMC4Q5T2S8 1044 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 BROXQ5VW32 411 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 CIAPIN1Q6FI81 312 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 TUBA3EQ6PEY2 450 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 TMEM270Q6UE05 265 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 ARPINQ7Z6K5 226 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 KRT73Q86Y46 540 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 SNX31Q8N9S9 440 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 NEDD1Q8NHV4 660 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 DCUN1D5Q9BTE7 237 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 TMEM117Q9H0C3 514 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 NOL6Q9H6R4 1146 aaKnown RBP5.19□□□□□ -1.58
PCDH9-203ENST00000456367 TFCP2L1Q9NZI6 479 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 MBD2Q9UBB5 411 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 STK39Q9UEW8 545 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 SLC12A6Q9UHW9 1150 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 ZNF180Q9UJW8 692 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 AP3M1Q9Y2T2 418 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 FADS3Q9Y5Q0 445 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 TAF6LQ9Y6J9 622 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 NCANO14594 1321 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 ZMYM2Q9UBW7 1377 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 ARAP3Q8WWN8 1544 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 SAGE2PA6NJ88 616 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 LZTS3O60299 673 aaPredicted RBP5.19□□□□□ -1.58
PCDH9-203ENST00000456367 P4HBP07237 508 aaKnown RBP5.19□□□□□ -1.58
PCDH9-203ENST00000456367 GTF2H1P32780 548 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 RAP1GAPP47736 663 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 ERFP50548 548 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 KCNK10P57789 538 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 WASHC5Q12768 1159 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 PRKAA1Q13131 559 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 SPANXN2Q5MJ10 180 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 ABRAXAS1Q6UWZ7 409 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 CDH24Q86UP0 819 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 ERI1Q8IV48 349 aaKnown RBP5.19□□□□□ -1.58
PCDH9-203ENST00000456367 NUP93Q8N1F7 819 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 PDCD6IPQ8WUM4 868 aaKnown RBP5.19□□□□□ -1.58
PCDH9-203ENST00000456367 CAPSLQ8WWF8 208 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 PLEKHG4BQ96PX9 1271 aa5.19□□□□□ -1.58
PCDH9-203ENST00000456367 DUSP9Q99956 384 aaKnown RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms