RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 ZNF518BQ9C0D4 1074 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 CRISPLD1Q9H336 500 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 CSNK1G1Q9HCP0 422 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 NLRC4Q9NPP4 1024 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 FAM49BQ9NUQ9 324 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 HESX1Q9UBX0 185 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 CD207Q9UJ71 328 aa15.17■□□□□ 0.02
HMGXB4-204ENST00000455359 CCDC195A0A1B0GUA6 201 aa15.16■□□□□ 0.02
HMGXB4-204ENST00000455359 CYP26A1O43174 497 aa15.16■□□□□ 0.02
HMGXB4-204ENST00000455359 AP1G2O75843 785 aa15.16■□□□□ 0.02
HMGXB4-204ENST00000455359 FGF19O95750 216 aa15.16■□□□□ 0.02
HMGXB4-204ENST00000455359 TPM1P09493 284 aa15.16■□□□□ 0.02
HMGXB4-204ENST00000455359 SETSIPP0DME0 302 aa15.16■□□□□ 0.02
HMGXB4-204ENST00000455359 CCDC130P13994 396 aa15.16■□□□□ 0.02
HMGXB4-204ENST00000455359 FERP16591 822 aa15.16■□□□□ 0.02
HMGXB4-204ENST00000455359 NPR3P17342 541 aa15.16■□□□□ 0.02
HMGXB4-204ENST00000455359 ANXA13P27216 316 aa15.16■□□□□ 0.02
HMGXB4-204ENST00000455359 CLCN1P35523 988 aa15.16■□□□□ 0.02
HMGXB4-204ENST00000455359 GRIK1P39086 918 aa15.16■□□□□ 0.02
HMGXB4-204ENST00000455359 ZNF75DP51815 510 aa15.16■□□□□ 0.02
HMGXB4-204ENST00000455359 RBM10P98175 930 aaKnown RBP15.16■□□□□ 0.02
HMGXB4-204ENST00000455359 TWF1Q12792 350 aa15.16■□□□□ 0.02
HMGXB4-204ENST00000455359 ATAT1Q5SQI0 421 aa15.16■□□□□ 0.02
HMGXB4-204ENST00000455359 PPP1R26Q5T8A7 1209 aaPredicted RBP15.16■□□□□ 0.02
HMGXB4-204ENST00000455359 ZNF677Q86XU0 584 aa15.16■□□□□ 0.02
HMGXB4-204ENST00000455359 SMRP1Q8NCR6 262 aa15.16■□□□□ 0.02
HMGXB4-204ENST00000455359 ZNF606Q8WXB4 792 aa15.16■□□□□ 0.02
HMGXB4-204ENST00000455359 PPM1EQ8WY54 764 aa15.16■□□□□ 0.02
HMGXB4-204ENST00000455359 SYN2Q92777 582 aaPredicted RBP15.16■□□□□ 0.02
HMGXB4-204ENST00000455359 PSMG2Q969U7 264 aa15.16■□□□□ 0.02
HMGXB4-204ENST00000455359 ZNF707Q96C28 371 aaPredicted RBP15.16■□□□□ 0.02
HMGXB4-204ENST00000455359 ZNF512Q96ME7 567 aaPredicted RBP15.16■□□□□ 0.02
HMGXB4-204ENST00000455359 RIPOR3Q96MK2 946 aa15.16■□□□□ 0.02
HMGXB4-204ENST00000455359 LPIN3Q9BQK8 851 aa15.16■□□□□ 0.02
HMGXB4-204ENST00000455359 S1PR5Q9H228 398 aa15.16■□□□□ 0.02
HMGXB4-204ENST00000455359 AVENQ9NQS1 362 aaPredicted RBP15.16■□□□□ 0.02
HMGXB4-204ENST00000455359 KRT82Q9NSB4 513 aa15.16■□□□□ 0.02
HMGXB4-204ENST00000455359 COMMD8Q9NX08 183 aa15.16■□□□□ 0.02
HMGXB4-204ENST00000455359 CAPN11Q9UMQ6 739 aa15.16■□□□□ 0.02
HMGXB4-204ENST00000455359 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.16■□□□□ 0.02
HMGXB4-204ENST00000455359 TSC2P49815 1807 aa15.15■□□□□ 0.02
HMGXB4-204ENST00000455359 RFPL2O75678 378 aa15.15■□□□□ 0.02
HMGXB4-204ENST00000455359 CSH1P0DML2 217 aa15.15■□□□□ 0.02
HMGXB4-204ENST00000455359 CSH2P0DML3 217 aa15.15■□□□□ 0.02
HMGXB4-204ENST00000455359 CYP11B1P15538 503 aa15.15■□□□□ 0.02
HMGXB4-204ENST00000455359 MTHFRP42898 656 aa15.15■□□□□ 0.02
HMGXB4-204ENST00000455359 PDE6CP51160 858 aa15.15■□□□□ 0.02
HMGXB4-204ENST00000455359 BCAT1P54687 386 aa15.15■□□□□ 0.02
HMGXB4-204ENST00000455359 ZBED6P86452 979 aa15.15■□□□□ 0.02
HMGXB4-204ENST00000455359 DLX2Q07687 328 aaPredicted RBP15.15■□□□□ 0.02
HMGXB4-204ENST00000455359 CCDC142Q17RM4 750 aa15.15■□□□□ 0.02
HMGXB4-204ENST00000455359 LEXMQ3ZCV2 418 aa15.15■□□□□ 0.02
HMGXB4-204ENST00000455359 EP400NLQ6ZTU2 488 aa15.15■□□□□ 0.02
HMGXB4-204ENST00000455359 STK32AQ8WU08 396 aa15.15■□□□□ 0.02
HMGXB4-204ENST00000455359 TFAP2BQ92481 460 aa15.15■□□□□ 0.02
HMGXB4-204ENST00000455359 SMG7Q92540 1137 aaKnown RBP15.15■□□□□ 0.02
HMGXB4-204ENST00000455359 AIPL1Q9NZN9 384 aa15.15■□□□□ 0.02
HMGXB4-204ENST00000455359 TSPAN16Q9UKR8 245 aa15.15■□□□□ 0.02
HMGXB4-204ENST00000455359 PCDHGC3Q9UN70 934 aa15.15■□□□□ 0.02
HMGXB4-204ENST00000455359 LUC7L2Q9Y383 392 aaKnown RBP15.15■□□□□ 0.02
HMGXB4-204ENST00000455359 F8VP50 259 aa15.14■□□□□ 0.01
HMGXB4-204ENST00000455359 CLDN5O00501 218 aa15.14■□□□□ 0.01
HMGXB4-204ENST00000455359 AP5Z1O43299 807 aa15.14■□□□□ 0.01
HMGXB4-204ENST00000455359 THAP12O43422 761 aa15.14■□□□□ 0.01
HMGXB4-204ENST00000455359 MICAL2O94851 1124 aa15.14■□□□□ 0.01
HMGXB4-204ENST00000455359 PTPN2P17706 415 aa15.14■□□□□ 0.01
HMGXB4-204ENST00000455359 ATF6P18850 670 aa15.14■□□□□ 0.01
HMGXB4-204ENST00000455359 KCNA5P22460 613 aa15.14■□□□□ 0.01
HMGXB4-204ENST00000455359 ADORA2BP29275 332 aa15.14■□□□□ 0.01
HMGXB4-204ENST00000455359 EPHA5P54756 1037 aa15.14■□□□□ 0.01
HMGXB4-204ENST00000455359 BST2Q10589 180 aaKnown RBP15.14■□□□□ 0.01
HMGXB4-204ENST00000455359 SMAD4Q13485 552 aaKnown RBP15.14■□□□□ 0.01
HMGXB4-204ENST00000455359 DDR2Q16832 855 aa15.14■□□□□ 0.01
HMGXB4-204ENST00000455359 AAK1Q2M2I8 961 aa15.14■□□□□ 0.01
HMGXB4-204ENST00000455359 GOLGA7BQ2TAP0 167 aa15.14■□□□□ 0.01
HMGXB4-204ENST00000455359 PKDCCQ504Y2 493 aa15.14■□□□□ 0.01
HMGXB4-204ENST00000455359 RARS2Q5T160 578 aaKnown RBP15.14■□□□□ 0.01
HMGXB4-204ENST00000455359 TMC5Q6UXY8 1006 aa15.14■□□□□ 0.01
HMGXB4-204ENST00000455359 CLEC20AQ6ZU45 233 aa15.14■□□□□ 0.01
HMGXB4-204ENST00000455359 DNAJB7Q7Z6W7 309 aaPredicted RBP15.14■□□□□ 0.01
HMGXB4-204ENST00000455359 SLC47A2Q86VL8 602 aa15.14■□□□□ 0.01
HMGXB4-204ENST00000455359 SCN4BQ8IWT1 228 aa15.14■□□□□ 0.01
HMGXB4-204ENST00000455359 TTC9BQ8N6N2 239 aa15.14■□□□□ 0.01
HMGXB4-204ENST00000455359 TRMT2BQ96GJ1 504 aaKnown RBP15.14■□□□□ 0.01
HMGXB4-204ENST00000455359 MYRFLQ96LU7 910 aa15.14■□□□□ 0.01
HMGXB4-204ENST00000455359 SMOQ99835 787 aa15.14■□□□□ 0.01
HMGXB4-204ENST00000455359 ZSWIM1Q9BR11 485 aa15.14■□□□□ 0.01
HMGXB4-204ENST00000455359 LHX5Q9H2C1 402 aa15.14■□□□□ 0.01
HMGXB4-204ENST00000455359 PIDD1Q9HB75 910 aa15.14■□□□□ 0.01
HMGXB4-204ENST00000455359 FAM50BQ9Y247 325 aa15.14■□□□□ 0.01
HMGXB4-204ENST00000455359 BRWD1Q9NSI6 2320 aa15.13■□□□□ 0.01
HMGXB4-204ENST00000455359 GOLGA6L3A6NEY3 463 aa15.13■□□□□ 0.01
HMGXB4-204ENST00000455359 ZNF197O14709 1029 aa15.13■□□□□ 0.01
HMGXB4-204ENST00000455359 XPO1O14980 1071 aaKnown RBP15.13■□□□□ 0.01
HMGXB4-204ENST00000455359 CCL16O15467 120 aa15.13■□□□□ 0.01
HMGXB4-204ENST00000455359 GFPT2O94808 682 aa15.13■□□□□ 0.01
HMGXB4-204ENST00000455359 RTN3O95197 1032 aaPredicted RBP15.13■□□□□ 0.01
HMGXB4-204ENST00000455359 GYPCP04921 128 aa15.13■□□□□ 0.01
HMGXB4-204ENST00000455359 BRD2P25440 801 aaKnown RBP15.13■□□□□ 0.01
HMGXB4-204ENST00000455359 KRT9P35527 623 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms