RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 GPR65Q8IYL9 337 aa7.2□□□□□ -1.26
ECHDC1-210ENST00000454859 GOLGA6L1Q8N7Z2 621 aa7.2□□□□□ -1.26
ECHDC1-210ENST00000454859 B3GALNT2Q8NCR0 500 aa7.2□□□□□ -1.26
ECHDC1-210ENST00000454859 OR6B3Q8NGW1 331 aa7.2□□□□□ -1.26
ECHDC1-210ENST00000454859 SUSD3Q96L08 255 aa7.2□□□□□ -1.26
ECHDC1-210ENST00000454859 AGO3Q9H9G7 860 aaKnown RBP7.2□□□□□ -1.26
ECHDC1-210ENST00000454859 RBM12Q9NTZ6 932 aaKnown RBP7.2□□□□□ -1.26
ECHDC1-210ENST00000454859 WBP1LQ9NX94 342 aa7.2□□□□□ -1.26
ECHDC1-210ENST00000454859 FAM53CQ9NYF3 392 aa7.2□□□□□ -1.26
ECHDC1-210ENST00000454859 PCDHB8Q9UN66 801 aa7.2□□□□□ -1.26
ECHDC1-210ENST00000454859 L1RE1Q9UN81 338 aa7.2□□□□□ -1.26
ECHDC1-210ENST00000454859 DRG1Q9Y295 367 aaKnown RBP7.2□□□□□ -1.26
ECHDC1-210ENST00000454859 UTP11Q9Y3A2 253 aaKnown RBP7.2□□□□□ -1.26
ECHDC1-210ENST00000454859 MAP2K7O14733 419 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 PTPN1P18031 435 aaKnown RBP7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 IRX5P78411 483 aaPredicted RBP7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 CAP1Q01518 475 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 DSC1Q08554 894 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 GOLGA7BQ2TAP0 167 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 ODF2Q5BJF6 829 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 BEND6Q5SZJ8 279 aaPredicted RBP7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 ALS2CLQ60I27 953 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 C4orf22Q6V702 233 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 STRADAQ7RTN6 431 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 ALG3Q92685 438 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 SENP8Q96LD8 212 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 SLC9A7Q96T83 725 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 GAD1Q99259 594 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 MRPL45Q9BRJ2 306 aaKnown RBP7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 ACP6Q9NPH0 428 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 OGFRQ9NZT2 677 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 RCOR3Q9P2K3 495 aaPredicted RBP7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 C2CD4BA6NLJ0 364 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 DCDC2CA8MYV0 355 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 MDM4O15151 490 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 HSF2BPO75031 334 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 GAS8O95995 478 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 PFKMP08237 780 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 GHRP10912 638 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 NPR3P17342 541 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 GPD1P21695 349 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 CXCR5P32302 372 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 MLH1P40692 756 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 RAP1GAPP47736 663 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 MTMR3Q13615 1198 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 TFDP3Q5H9I0 405 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 NOMO2Q5JPE7 1267 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 DCAF12L1Q5VU92 463 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 FAM171BQ6P995 826 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 DSTYKQ6XUX3 929 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 LRRN4CLQ8ND94 238 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 CMASQ8NFW8 434 aaPredicted RBP7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 MYCBPAPQ8TBZ2 947 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 FAM71BQ8TC56 605 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 AENQ8WTP8 325 aaKnown RBP7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 C2orf15Q8WU43 125 aaKnown RBP7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 CENPIQ92674 756 aaPredicted RBP7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 WNT8BQ93098 351 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 ARMC5Q96C12 935 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 LRRC45Q96CN5 670 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 FUBP3Q96I24 572 aaKnown RBP eCLIP7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 TWNKQ96RR1 684 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 CPXM1Q96SM3 734 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 PHACTR1Q9C0D0 580 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 CSNK1G1Q9HCP0 422 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 MED4Q9NPJ6 270 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 CNGB3Q9NQW8 809 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.19□□□□□ -1.262e-6■■■■■ 96.1
ECHDC1-210ENST00000454859 TRMT13Q9NUP7 481 aaKnown RBP7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 MAFFQ9ULX9 164 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 HES2Q9Y543 173 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 TTC3P53804 2025 aa7.19□□□□□ -1.26
ECHDC1-210ENST00000454859 ENDOD1O94919 500 aa7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 OAZ2O95190 189 aa7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 RHOXF2BP0C7M4 288 aa7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 FAM200BP0CF97 657 aa7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 ZFXP17010 805 aaPredicted RBP7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 PSMA2P25787 234 aa7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 HTR7P34969 479 aa7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 SOX4Q06945 474 aaPredicted RBP7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 C2orf54Q08AI8 447 aa7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 CBLBQ13191 982 aa7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 KLF1Q13351 362 aaPredicted RBP7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 TFDP2Q14188 446 aa7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 ZNF394Q53GI3 561 aa7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 PPP1R26Q5T8A7 1209 aaPredicted RBP7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 FBXO46Q6PJ61 603 aaPredicted RBP7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 C4orf50Q6ZRC1 276 aa7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 ACOT1Q86TX2 421 aa7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 NPAS4Q8IUM7 802 aa7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 PASD1Q8IV76 773 aa7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 ATL2Q8NHH9 583 aa7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 SMARCD1Q96GM5 515 aa7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 MCEEQ96PE7 176 aa7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 RHOXF2Q9BQY4 288 aa7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 LRRC1Q9BTT6 524 aa7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 COLEC11Q9BWP8 271 aa7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 APOL6Q9BWW8 343 aa7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 HSFX1Q9UBD0 423 aa7.18□□□□□ -1.26
ECHDC1-210ENST00000454859 LTBP2Q14767 1821 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms