RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 PAPLNO95428 1278 aa11.91□□□□□ -0.5
TRAF4-206ENST00000454852 CALCAP01258 141 aa11.91□□□□□ -0.5
TRAF4-206ENST00000454852 PTMAP06454 111 aaKnown RBP11.91□□□□□ -0.5
TRAF4-206ENST00000454852 CFHP08603 1231 aa11.91□□□□□ -0.5
TRAF4-206ENST00000454852 OR4Q2P0C623 313 aa11.91□□□□□ -0.5
TRAF4-206ENST00000454852 FAM228BP0C875 321 aa11.91□□□□□ -0.5
TRAF4-206ENST00000454852 FAM200BP0CF97 657 aa11.91□□□□□ -0.5
TRAF4-206ENST00000454852 CPB1P15086 417 aa11.91□□□□□ -0.5
TRAF4-206ENST00000454852 NPR3P17342 541 aa11.91□□□□□ -0.5
TRAF4-206ENST00000454852 POU3F3P20264 500 aaPredicted RBP11.91□□□□□ -0.5
TRAF4-206ENST00000454852 IRS1P35568 1242 aa11.91□□□□□ -0.5
TRAF4-206ENST00000454852 CYLC1P35663 651 aaPredicted RBP11.91□□□□□ -0.5
TRAF4-206ENST00000454852 PLA2G4AP47712 749 aa11.91□□□□□ -0.5
TRAF4-206ENST00000454852 PTPROQ16827 1216 aa11.91□□□□□ -0.5
TRAF4-206ENST00000454852 CCDC142Q17RM4 750 aa11.91□□□□□ -0.5
TRAF4-206ENST00000454852 GOLGA7BQ2TAP0 167 aa11.91□□□□□ -0.5
TRAF4-206ENST00000454852 TAF3Q5VWG9 929 aa11.91□□□□□ -0.5
TRAF4-206ENST00000454852 GPR153Q6NV75 609 aa11.91□□□□□ -0.5
TRAF4-206ENST00000454852 DENND1BQ6P3S1 775 aa11.91□□□□□ -0.5
TRAF4-206ENST00000454852 RAD9BQ6WBX8 426 aa11.91□□□□□ -0.5
TRAF4-206ENST00000454852 PALB2Q86YC2 1186 aa11.91□□□□□ -0.5
TRAF4-206ENST00000454852 PHF13Q86YI8 300 aaPredicted RBP11.91□□□□□ -0.5
TRAF4-206ENST00000454852 SPATA2LQ8IUW3 424 aaPredicted RBP11.91□□□□□ -0.5
TRAF4-206ENST00000454852 GLYCTKQ8IVS8 523 aa11.91□□□□□ -0.5
TRAF4-206ENST00000454852 TCEAL8Q8IYN2 117 aa11.91□□□□□ -0.5
TRAF4-206ENST00000454852 HDAC7Q8WUI4 952 aa11.91□□□□□ -0.5
TRAF4-206ENST00000454852 AUTS2Q8WXX7 1259 aa11.91□□□□□ -0.5
TRAF4-206ENST00000454852 ARNTL2Q8WYA1 636 aa11.91□□□□□ -0.5
TRAF4-206ENST00000454852 KCTD13Q8WZ19 329 aa11.91□□□□□ -0.5
TRAF4-206ENST00000454852 MRPL38Q96DV4 380 aaKnown RBP11.91□□□□□ -0.5
TRAF4-206ENST00000454852 VCPIP1Q96JH7 1222 aa11.91□□□□□ -0.5
TRAF4-206ENST00000454852 HSFY1Q96LI6 401 aa11.91□□□□□ -0.5
TRAF4-206ENST00000454852 C8orf48Q96LL4 319 aa11.91□□□□□ -0.5
TRAF4-206ENST00000454852 SLC4A5Q9BY07 1137 aa11.91□□□□□ -0.5
TRAF4-206ENST00000454852 CEP83Q9Y592 693 aa11.91□□□□□ -0.5
TRAF4-206ENST00000454852 SOWAHDA6NJG2 315 aa11.9□□□□□ -0.5
TRAF4-206ENST00000454852 HIDE1A8MVS5 230 aa11.9□□□□□ -0.5
TRAF4-206ENST00000454852 M0QYV0 167 aa11.9□□□□□ -0.5
TRAF4-206ENST00000454852 AKR1B10O60218 316 aa11.9□□□□□ -0.5
TRAF4-206ENST00000454852 RTN2O75298 545 aa11.9□□□□□ -0.5
TRAF4-206ENST00000454852 HAPLN1P10915 354 aaPredicted RBP11.9□□□□□ -0.5
TRAF4-206ENST00000454852 RPL17P18621 184 aaKnown RBP11.9□□□□□ -0.5
TRAF4-206ENST00000454852 MMP8P22894 467 aa11.9□□□□□ -0.5
TRAF4-206ENST00000454852 GABRB2P47870 512 aa11.9□□□□□ -0.5
TRAF4-206ENST00000454852 TUFMP49411 452 aaKnown RBP11.9□□□□□ -0.5
TRAF4-206ENST00000454852 GSCP56915 257 aaPredicted RBP11.9□□□□□ -0.5
TRAF4-206ENST00000454852 SLC8A3P57103 927 aa11.9□□□□□ -0.5
TRAF4-206ENST00000454852 CYP27A1Q02318 531 aa11.9□□□□□ -0.5
TRAF4-206ENST00000454852 PDE4CQ08493 712 aa11.9□□□□□ -0.5
TRAF4-206ENST00000454852 RAB41Q5JT25 222 aa11.9□□□□□ -0.5
TRAF4-206ENST00000454852 ACAD10Q6JQN1 1059 aa11.9□□□□□ -0.5
TRAF4-206ENST00000454852 RNF19BQ6ZMZ0 732 aa11.9□□□□□ -0.5
TRAF4-206ENST00000454852 TMEM110Q86TL2 294 aa11.9□□□□□ -0.5
TRAF4-206ENST00000454852 SCML4Q8N228 414 aa11.9□□□□□ -0.5
TRAF4-206ENST00000454852 ZMIZ2Q8NF64 920 aa11.9□□□□□ -0.5
TRAF4-206ENST00000454852 SECISBP2LQ93073 1101 aaKnown RBP11.9□□□□□ -0.5
TRAF4-206ENST00000454852 SPATA17Q96L03 361 aa11.9□□□□□ -0.5
TRAF4-206ENST00000454852 NOX5Q96PH1 765 aa11.9□□□□□ -0.5
TRAF4-206ENST00000454852 CDCA3Q99618 268 aaPredicted RBP11.9□□□□□ -0.5
TRAF4-206ENST00000454852 SMOQ99835 787 aa11.9□□□□□ -0.5
TRAF4-206ENST00000454852 DEF6Q9H4E7 631 aa11.9□□□□□ -0.5
TRAF4-206ENST00000454852 DMAP1Q9NPF5 467 aaPredicted RBP11.9□□□□□ -0.5
TRAF4-206ENST00000454852 KRT82Q9NSB4 513 aa11.9□□□□□ -0.5
TRAF4-206ENST00000454852 COMMD8Q9NX08 183 aa11.9□□□□□ -0.5
TRAF4-206ENST00000454852 FBXW11Q9UKB1 542 aa11.9□□□□□ -0.5
TRAF4-206ENST00000454852 INTUQ9ULD6 942 aa11.9□□□□□ -0.5
TRAF4-206ENST00000454852 NCANO14594 1321 aa11.89□□□□□ -0.51
TRAF4-206ENST00000454852 LAMA2P24043 3122 aaKnown RBP11.89□□□□□ -0.51
TRAF4-206ENST00000454852 HHLA1C9JL84 531 aa11.89□□□□□ -0.51
TRAF4-206ENST00000454852 CLDN5O00501 218 aa11.89□□□□□ -0.51
TRAF4-206ENST00000454852 ZNF263O14978 683 aa11.89□□□□□ -0.51
TRAF4-206ENST00000454852 TRIM66O15016 1216 aa11.89□□□□□ -0.51
TRAF4-206ENST00000454852 TGM5O43548 720 aa11.89□□□□□ -0.51
TRAF4-206ENST00000454852 AP1G2O75843 785 aa11.89□□□□□ -0.51
TRAF4-206ENST00000454852 POU2F2P09086 479 aa11.89□□□□□ -0.51
TRAF4-206ENST00000454852 BDNFP23560 247 aa11.89□□□□□ -0.51
TRAF4-206ENST00000454852 ADORA2BP29275 332 aa11.89□□□□□ -0.51
TRAF4-206ENST00000454852 CLCN4P51793 760 aa11.89□□□□□ -0.51
TRAF4-206ENST00000454852 SNX16P57768 344 aa11.89□□□□□ -0.51
TRAF4-206ENST00000454852 GFPT1Q06210 699 aaPredicted RBP11.89□□□□□ -0.51
TRAF4-206ENST00000454852 C1QBPQ07021 282 aaKnown RBP11.89□□□□□ -0.51
TRAF4-206ENST00000454852 PTP4A2Q12974 167 aa11.89□□□□□ -0.51
TRAF4-206ENST00000454852 PDCLQ13371 301 aa11.89□□□□□ -0.51
TRAF4-206ENST00000454852 PLPP4Q5VZY2 271 aa11.89□□□□□ -0.51
TRAF4-206ENST00000454852 ALKBH5Q6P6C2 394 aaKnown RBP11.89□□□□□ -0.51
TRAF4-206ENST00000454852 PIGZQ86VD9 579 aa11.89□□□□□ -0.51
TRAF4-206ENST00000454852 GPIHBP1Q8IV16 184 aa11.89□□□□□ -0.51
TRAF4-206ENST00000454852 ATAD1Q8NBU5 361 aa11.89□□□□□ -0.51
TRAF4-206ENST00000454852 GDPD5Q8WTR4 605 aa11.89□□□□□ -0.51
TRAF4-206ENST00000454852 SLC22A17Q8WUG5 538 aa11.89□□□□□ -0.51
TRAF4-206ENST00000454852 MED10Q9BTT4 135 aa11.89□□□□□ -0.51
TRAF4-206ENST00000454852 MIS12Q9H081 205 aa11.89□□□□□ -0.51
TRAF4-206ENST00000454852 PDCL3Q9H2J4 239 aa11.89□□□□□ -0.51
TRAF4-206ENST00000454852 TTYH1Q9H313 450 aaPredicted RBP11.89□□□□□ -0.51
TRAF4-206ENST00000454852 CRISPLD1Q9H336 500 aa11.89□□□□□ -0.51
TRAF4-206ENST00000454852 PLEKHA4Q9H4M7 779 aa11.89□□□□□ -0.51
TRAF4-206ENST00000454852 CERS4Q9HA82 394 aa11.89□□□□□ -0.51
TRAF4-206ENST00000454852 TMEM30AQ9NV96 361 aa11.89□□□□□ -0.51
TRAF4-206ENST00000454852 IL37Q9NZH6 218 aa11.89□□□□□ -0.51
TRAF4-206ENST00000454852 CYTH4Q9UIA0 394 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms