RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 SCD5Q86SK9 330 aa5.28□□□□□ -1.56
RIF1-207ENST00000454583 MCOLN2Q8IZK6 566 aa5.28□□□□□ -1.56
RIF1-207ENST00000454583 C1orf131Q8NDD1 294 aaKnown RBP5.28□□□□□ -1.56
RIF1-207ENST00000454583 FNIP1Q8TF40 1166 aa5.28□□□□□ -1.56
RIF1-207ENST00000454583 ZNF606Q8WXB4 792 aa5.28□□□□□ -1.56
RIF1-207ENST00000454583 SLC39A13Q96H72 371 aa5.28□□□□□ -1.56
RIF1-207ENST00000454583 PEBP4Q96S96 227 aa5.28□□□□□ -1.56
RIF1-207ENST00000454583 GAD1Q99259 594 aa5.28□□□□□ -1.56
RIF1-207ENST00000454583 AGPAT1Q99943 283 aa5.28□□□□□ -1.56
RIF1-207ENST00000454583 DNAI2Q9GZS0 605 aa5.28□□□□□ -1.56
RIF1-207ENST00000454583 CD248Q9HCU0 757 aa5.28□□□□□ -1.56
RIF1-207ENST00000454583 TRMT1Q9NXH9 659 aaKnown RBP5.28□□□□□ -1.56
RIF1-207ENST00000454583 PIN4Q9Y237 131 aaKnown RBP5.28□□□□□ -1.56
RIF1-207ENST00000454583 NFS1Q9Y697 457 aa5.28□□□□□ -1.56
RIF1-207ENST00000454583 C2orf72A6NCS6 295 aa5.28□□□□□ -1.56
RIF1-207ENST00000454583 TMEM191CA6NGB0 347 aa5.28□□□□□ -1.56
RIF1-207ENST00000454583 SEC24AO95486 1093 aa5.28□□□□□ -1.56
RIF1-207ENST00000454583 TMEM191BP0C7N4 346 aa5.28□□□□□ -1.56
RIF1-207ENST00000454583 TPM4P67936 248 aa5.28□□□□□ -1.56
RIF1-207ENST00000454583 NRG1Q02297 640 aaPredicted RBP5.28□□□□□ -1.56
RIF1-207ENST00000454583 TAP1Q03518 808 aa5.28□□□□□ -1.56
RIF1-207ENST00000454583 STRN3Q13033 797 aa5.28□□□□□ -1.56
RIF1-207ENST00000454583 ELF2Q15723 593 aa5.28□□□□□ -1.56
RIF1-207ENST00000454583 TPD52L1Q16890 204 aaPredicted RBP5.28□□□□□ -1.56
RIF1-207ENST00000454583 WHAMMP3Q1A5X7 153 aa5.28□□□□□ -1.56
RIF1-207ENST00000454583 ERCC6LQ2NKX8 1250 aa5.28□□□□□ -1.56
RIF1-207ENST00000454583 LRIT3Q3SXY7 679 aa5.28□□□□□ -1.56
RIF1-207ENST00000454583 INTS6LQ5JSJ4 861 aaKnown RBP5.28□□□□□ -1.56
RIF1-207ENST00000454583 WDR78Q5VTH9 848 aa5.28□□□□□ -1.56
RIF1-207ENST00000454583 C11orf63Q6NUN7 778 aa5.28□□□□□ -1.56
RIF1-207ENST00000454583 KIAA0907Q7Z7F0 614 aaPredicted RBP5.28□□□□□ -1.56
RIF1-207ENST00000454583 TMEM86AQ8N2M4 240 aa5.28□□□□□ -1.56
RIF1-207ENST00000454583 METTL13Q8N6R0 699 aa5.28□□□□□ -1.56
RIF1-207ENST00000454583 GPR161Q8N6U8 529 aaKnown RBP5.28□□□□□ -1.56
RIF1-207ENST00000454583 CPXM1Q96SM3 734 aa5.28□□□□□ -1.56
RIF1-207ENST00000454583 MAP7D2Q96T17 732 aa5.28□□□□□ -1.56
RIF1-207ENST00000454583 MMS19Q96T76 1030 aa5.28□□□□□ -1.56
RIF1-207ENST00000454583 TSG101Q99816 390 aa5.28□□□□□ -1.56
RIF1-207ENST00000454583 FAM49AQ9H0Q0 323 aaPredicted RBP5.28□□□□□ -1.56
RIF1-207ENST00000454583 TTYH1Q9H313 450 aaPredicted RBP5.28□□□□□ -1.56
RIF1-207ENST00000454583 ANKFY1Q9P2R3 1169 aa5.28□□□□□ -1.56
RIF1-207ENST00000454583 KCNU1A8MYU2 1149 aa5.27□□□□□ -1.57
RIF1-207ENST00000454583 H3BNC9 293 aa5.27□□□□□ -1.57
RIF1-207ENST00000454583 EXOC3O60645 756 aa5.27□□□□□ -1.57
RIF1-207ENST00000454583 SYF2O95926 243 aaKnown RBP5.27□□□□□ -1.57
RIF1-207ENST00000454583 TMEM253P0C7T8 217 aa5.27□□□□□ -1.57
RIF1-207ENST00000454583 TCF4P15884 667 aa5.27□□□□□ -1.57
RIF1-207ENST00000454583 FCARP24071 287 aa5.27□□□□□ -1.57
RIF1-207ENST00000454583 TBXAS1P24557 533 aaPredicted RBP5.27□□□□□ -1.57
RIF1-207ENST00000454583 CDH8P55286 799 aa5.27□□□□□ -1.57
RIF1-207ENST00000454583 BCAR1P56945 870 aa5.27□□□□□ -1.57
RIF1-207ENST00000454583 GFPT1Q06210 699 aaPredicted RBP5.27□□□□□ -1.57
RIF1-207ENST00000454583 MAMLD1Q13495 774 aa5.27□□□□□ -1.57
RIF1-207ENST00000454583 NOMO2Q5JPE7 1267 aa5.27□□□□□ -1.57
RIF1-207ENST00000454583 ACAD10Q6JQN1 1059 aa5.27□□□□□ -1.57
RIF1-207ENST00000454583 PMF1Q6P1K2 205 aa5.27□□□□□ -1.57
RIF1-207ENST00000454583 Q6ZNB5 142 aa5.27□□□□□ -1.57
RIF1-207ENST00000454583 MTERF4Q7Z6M4 381 aaKnown RBP5.27□□□□□ -1.57
RIF1-207ENST00000454583 DNAAF5Q86Y56 855 aa5.27□□□□□ -1.57
RIF1-207ENST00000454583 HERC6Q8IVU3 1022 aa5.27□□□□□ -1.57
RIF1-207ENST00000454583 MREGQ8N565 214 aa5.27□□□□□ -1.57
RIF1-207ENST00000454583 KIAA1958Q8N8K9 716 aa5.27□□□□□ -1.57
RIF1-207ENST00000454583 SPPL3Q8TCT6 385 aa5.27□□□□□ -1.57
RIF1-207ENST00000454583 ZNF707Q96C28 371 aaPredicted RBP5.27□□□□□ -1.57
RIF1-207ENST00000454583 TMEM176AQ96HP8 235 aa5.27□□□□□ -1.57
RIF1-207ENST00000454583 MSLNLQ96KJ4 702 aa5.27□□□□□ -1.57
RIF1-207ENST00000454583 FAM81BQ96LP2 452 aa5.27□□□□□ -1.57
RIF1-207ENST00000454583 PPP1R16BQ96T49 567 aa5.27□□□□□ -1.57
RIF1-207ENST00000454583 PLVAPQ9BX97 442 aa5.27□□□□□ -1.57
RIF1-207ENST00000454583 WDR27A2RRH5 827 aa5.27□□□□□ -1.57
RIF1-207ENST00000454583 INO80B-WBP1J3KQ70 363 aa5.27□□□□□ -1.57
RIF1-207ENST00000454583 SOX1O00570 391 aaPredicted RBP5.27□□□□□ -1.57
RIF1-207ENST00000454583 ATP2C2O75185 946 aa5.27□□□□□ -1.57
RIF1-207ENST00000454583 FGFR1OPO95684 399 aaKnown RBP5.27□□□□□ -1.57
RIF1-207ENST00000454583 SOD2P04179 222 aa5.27□□□□□ -1.57
RIF1-207ENST00000454583 SCAPQ12770 1279 aa5.27□□□□□ -1.57
RIF1-207ENST00000454583 STIM1Q13586 685 aa5.27□□□□□ -1.57
RIF1-207ENST00000454583 HSP90AA2PQ14568 343 aaPredicted RBP5.27□□□□□ -1.57
RIF1-207ENST00000454583 CYP1B1Q16678 543 aa5.27□□□□□ -1.57
RIF1-207ENST00000454583 WDR44Q5JSH3 913 aa5.27□□□□□ -1.57
RIF1-207ENST00000454583 LLGL2Q6P1M3 1020 aa5.27□□□□□ -1.57
RIF1-207ENST00000454583 MSANTD2Q6P1R3 559 aa5.27□□□□□ -1.57
RIF1-207ENST00000454583 NT5DC3Q86UY8 548 aa5.27□□□□□ -1.57
RIF1-207ENST00000454583 MYCBPAPQ8TBZ2 947 aa5.27□□□□□ -1.57
RIF1-207ENST00000454583 C8orf48Q96LL4 319 aa5.27□□□□□ -1.57
RIF1-207ENST00000454583 SLC9A7Q96T83 725 aa5.27□□□□□ -1.57
RIF1-207ENST00000454583 OXCT2Q9BYC2 517 aaPredicted RBP5.27□□□□□ -1.57
RIF1-207ENST00000454583 ZNF518BQ9C0D4 1074 aa5.27□□□□□ -1.57
RIF1-207ENST00000454583 NUCKS1Q9H1E3 243 aaKnown RBP5.27□□□□□ -1.57
RIF1-207ENST00000454583 COMMD8Q9NX08 183 aa5.27□□□□□ -1.57
RIF1-207ENST00000454583 FRMD4BQ9Y2L6 1034 aa5.27□□□□□ -1.57
RIF1-207ENST00000454583 IGLV3-10A0A075B6K4 115 aa5.27□□□□□ -1.57
RIF1-207ENST00000454583 C2CD4BA6NLJ0 364 aa5.27□□□□□ -1.57
RIF1-207ENST00000454583 PAPSS1O43252 624 aaPredicted RBP5.27□□□□□ -1.57
RIF1-207ENST00000454583 EFCAB14O75071 495 aa5.27□□□□□ -1.57
RIF1-207ENST00000454583 MICAL2O94851 1124 aa5.27□□□□□ -1.57
RIF1-207ENST00000454583 TFE3P19532 575 aaPredicted RBP5.27□□□□□ -1.57
RIF1-207ENST00000454583 PSMA3P25788 255 aa5.27□□□□□ -1.57
RIF1-207ENST00000454583 EIF4A3P38919 411 aaKnown RBP5.27□□□□□ -1.57
RIF1-207ENST00000454583 PNPLA4P41247 253 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms