RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 DPH6Q7L8W6 267 aa25.43■■□□□ 1.66
LYSMD2-202ENST00000454181 OSTM1Q86WC4 334 aa25.43■■□□□ 1.66
LYSMD2-202ENST00000454181 GPD1LQ8N335 351 aa25.43■■□□□ 1.66
LYSMD2-202ENST00000454181 ARL14EPQ8N8R7 260 aaPredicted RBP25.43■■□□□ 1.66
LYSMD2-202ENST00000454181 PKMYT1Q99640 499 aa25.43■■□□□ 1.66
LYSMD2-202ENST00000454181 POLR3BQ9NW08 1133 aaPredicted RBP25.43■■□□□ 1.66
LYSMD2-202ENST00000454181 ZNF638Q14966 1978 aaKnown RBP25.43■■□□□ 1.66
LYSMD2-202ENST00000454181 GABRDO14764 452 aa25.42■■□□□ 1.66
LYSMD2-202ENST00000454181 KIAA0391O15091 583 aaKnown RBP25.42■■□□□ 1.66
LYSMD2-202ENST00000454181 TNNC2P02585 160 aa25.42■■□□□ 1.66
LYSMD2-202ENST00000454181 MAGEA11P43364 429 aa25.42■■□□□ 1.66
LYSMD2-202ENST00000454181 CASP5P51878 434 aa25.42■■□□□ 1.66
LYSMD2-202ENST00000454181 DMC1Q14565 340 aa25.42■■□□□ 1.66
LYSMD2-202ENST00000454181 SURF1Q15526 300 aa25.42■■□□□ 1.66
LYSMD2-202ENST00000454181 MAPRE1Q15691 268 aaKnown RBP25.42■■□□□ 1.66
LYSMD2-202ENST00000454181 SOWAHAQ2M3V2 549 aa25.42■■□□□ 1.66
LYSMD2-202ENST00000454181 PLK5Q496M5 336 aa25.42■■□□□ 1.66
LYSMD2-202ENST00000454181 SH3RF2Q8TEC5 729 aa25.42■■□□□ 1.66
LYSMD2-202ENST00000454181 HPDLQ96IR7 371 aa25.42■■□□□ 1.66
LYSMD2-202ENST00000454181 SLC22A12Q96S37 553 aa25.42■■□□□ 1.66
LYSMD2-202ENST00000454181 PANK2Q9BZ23 570 aa25.42■■□□□ 1.66
LYSMD2-202ENST00000454181 ANGPTL2Q9UKU9 493 aa25.42■■□□□ 1.66
LYSMD2-202ENST00000454181 PRPF6O94906 941 aaKnown RBP25.41■■□□□ 1.66
LYSMD2-202ENST00000454181 ANXA13P27216 316 aa25.41■■□□□ 1.66
LYSMD2-202ENST00000454181 GRIK1P39086 918 aa25.41■■□□□ 1.66
LYSMD2-202ENST00000454181 USP4Q13107 963 aa25.41■■□□□ 1.66
LYSMD2-202ENST00000454181 EML3Q32P44 896 aa25.41■■□□□ 1.66
LYSMD2-202ENST00000454181 PLA2G2CQ5R387 149 aa25.41■■□□□ 1.66
LYSMD2-202ENST00000454181 NAIF1Q69YI7 327 aaPredicted RBP25.41■■□□□ 1.66
LYSMD2-202ENST00000454181 CCDC65Q8IXS2 484 aa25.41■■□□□ 1.66
LYSMD2-202ENST00000454181 FAM84AQ96KN4 292 aa25.41■■□□□ 1.66
LYSMD2-202ENST00000454181 SYT15Q9BQS2 421 aa25.41■■□□□ 1.66
LYSMD2-202ENST00000454181 SMOC1Q9H4F8 434 aa25.41■■□□□ 1.66
LYSMD2-202ENST00000454181 RXFP3Q9NSD7 469 aa25.41■■□□□ 1.66
LYSMD2-202ENST00000454181 EHD2Q9NZN4 543 aa25.41■■□□□ 1.66
LYSMD2-202ENST00000454181 SIX4Q9UIU6 781 aa25.41■■□□□ 1.66
LYSMD2-202ENST00000454181 CDH9Q9ULB4 789 aa25.41■■□□□ 1.66
LYSMD2-202ENST00000454181 ZNF233A6NK53 670 aa25.4■■□□□ 1.66
LYSMD2-202ENST00000454181 HCRTO43612 131 aa25.4■■□□□ 1.66
LYSMD2-202ENST00000454181 NFATC1O95644 943 aa25.4■■□□□ 1.66
LYSMD2-202ENST00000454181 GBP1P32455 592 aa25.4■■□□□ 1.66
LYSMD2-202ENST00000454181 DGKEP52429 567 aa25.4■■□□□ 1.66
LYSMD2-202ENST00000454181 CREB5Q02930 508 aa25.4■■□□□ 1.66
LYSMD2-202ENST00000454181 CCDC142Q17RM4 750 aa25.4■■□□□ 1.66
LYSMD2-202ENST00000454181 DUOXA2Q1HG44 320 aa25.4■■□□□ 1.66
LYSMD2-202ENST00000454181 RNF43Q68DV7 783 aa25.4■■□□□ 1.66
LYSMD2-202ENST00000454181 FAM171BQ6P995 826 aa25.4■■□□□ 1.66
LYSMD2-202ENST00000454181 VSTM1Q6UX27 236 aa25.4■■□□□ 1.66
LYSMD2-202ENST00000454181 CXorf38Q8TB03 319 aa25.4■■□□□ 1.66
LYSMD2-202ENST00000454181 INTS13Q9NVM9 706 aa25.4■■□□□ 1.66
LYSMD2-202ENST00000454181 TRPM5Q9NZQ8 1165 aa25.4■■□□□ 1.66
LYSMD2-202ENST00000454181 GCNT4Q9P109 453 aa25.4■■□□□ 1.66
LYSMD2-202ENST00000454181 EBF1Q9UH73 591 aa25.4■■□□□ 1.66
LYSMD2-202ENST00000454181 CNOT1A5YKK6 2376 aaKnown RBP25.4■■□□□ 1.66
LYSMD2-202ENST00000454181 ATG2BQ96BY7 2078 aa25.4■■□□□ 1.66
LYSMD2-202ENST00000454181 CHD8Q9HCK8 2581 aa25.39■■□□□ 1.66
LYSMD2-202ENST00000454181 C2orf78A6NCI8 922 aa25.39■■□□□ 1.66
LYSMD2-202ENST00000454181 ATP2C2O75185 946 aa25.39■■□□□ 1.66
LYSMD2-202ENST00000454181 PSMC1P62191 440 aaKnown RBP25.39■■□□□ 1.66
LYSMD2-202ENST00000454181 CYP27A1Q02318 531 aa25.39■■□□□ 1.66
LYSMD2-202ENST00000454181 N4BP2L1Q5TBK1 243 aaPredicted RBP25.39■■□□□ 1.66
LYSMD2-202ENST00000454181 LMBRD2Q68DH5 695 aaPredicted RBP25.39■■□□□ 1.66
LYSMD2-202ENST00000454181 TSTD1Q8NFU3 115 aa25.39■■□□□ 1.66
LYSMD2-202ENST00000454181 MYLPFQ96A32 169 aa25.39■■□□□ 1.66
LYSMD2-202ENST00000454181 MMS19Q96T76 1030 aa25.39■■□□□ 1.66
LYSMD2-202ENST00000454181 DUSP15Q9H1R2 295 aaPredicted RBP25.39■■□□□ 1.66
LYSMD2-202ENST00000454181 ARHGAP26Q9UNA1 814 aa25.39■■□□□ 1.66
LYSMD2-202ENST00000454181 DENND4CQ5VZ89 1909 aa25.39■■□□□ 1.65
LYSMD2-202ENST00000454181 SPAG17Q6Q759 2223 aa25.39■■□□□ 1.65
LYSMD2-202ENST00000454181 FRMD3A2A2Y4 597 aa25.38■■□□□ 1.65
LYSMD2-202ENST00000454181 TM4SF5O14894 197 aa25.38■■□□□ 1.65
LYSMD2-202ENST00000454181 PDGFRBP09619 1106 aa25.38■■□□□ 1.65
LYSMD2-202ENST00000454181 BDNFP23560 247 aa25.38■■□□□ 1.65
LYSMD2-202ENST00000454181 USP39Q53GS9 565 aaKnown RBP25.38■■□□□ 1.65
LYSMD2-202ENST00000454181 SCARA3Q6AZY7 606 aa25.38■■□□□ 1.65
LYSMD2-202ENST00000454181 DENND5BQ6ZUT9 1274 aa25.38■■□□□ 1.65
LYSMD2-202ENST00000454181 C11orf74Q86VG3 221 aa25.38■■□□□ 1.65
LYSMD2-202ENST00000454181 SPATA17Q96L03 361 aa25.38■■□□□ 1.65
LYSMD2-202ENST00000454181 CEP295NLQ96MC4 621 aa25.38■■□□□ 1.65
LYSMD2-202ENST00000454181 LINC00597Q9H2U6 94 aa25.38■■□□□ 1.65
LYSMD2-202ENST00000454181 GREB1Q4ZG55 1949 aa25.37■■□□□ 1.65
LYSMD2-202ENST00000454181 DCLK1O15075 740 aa25.37■■□□□ 1.65
LYSMD2-202ENST00000454181 CAVIN2O95810 425 aa25.37■■□□□ 1.65
LYSMD2-202ENST00000454181 PFKLP17858 780 aa25.37■■□□□ 1.65
LYSMD2-202ENST00000454181 LMO2P25791 158 aa25.37■■□□□ 1.65
LYSMD2-202ENST00000454181 FAM173BQ6P4H8 233 aa25.37■■□□□ 1.65
LYSMD2-202ENST00000454181 FGFBP2Q9BYJ0 223 aa25.37■■□□□ 1.65
LYSMD2-202ENST00000454181 LRRC27Q9C0I9 530 aa25.37■■□□□ 1.65
LYSMD2-202ENST00000454181 KIAA1586Q9HCI6 787 aa25.37■■□□□ 1.65
LYSMD2-202ENST00000454181 TCF3P15923 654 aa25.36■■□□□ 1.65
LYSMD2-202ENST00000454181 RESTQ13127 1097 aa25.36■■□□□ 1.65
LYSMD2-202ENST00000454181 CUL4AQ13619 759 aa25.36■■□□□ 1.65
LYSMD2-202ENST00000454181 C2orf27AQ580R0 203 aa25.36■■□□□ 1.65
LYSMD2-202ENST00000454181 PDILTQ8N807 584 aa25.36■■□□□ 1.65
LYSMD2-202ENST00000454181 OR5B17Q8NGF7 314 aa25.36■■□□□ 1.65
LYSMD2-202ENST00000454181 EZH1Q92800 747 aaPredicted RBP25.36■■□□□ 1.65
LYSMD2-202ENST00000454181 LSM14BQ9BX40 385 aaKnown RBP25.36■■□□□ 1.65
LYSMD2-202ENST00000454181 SNX25Q9H3E2 840 aa25.36■■□□□ 1.65
LYSMD2-202ENST00000454181 KMT2BQ9UMN6 2715 aaPredicted RBP25.36■■□□□ 1.65
LYSMD2-202ENST00000454181 MAP1BP46821 2468 aaKnown RBP25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms