RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 APOBEC3GQ9HC16 384 aaKnown RBP9.28□□□□□ -0.92
COL28A1-205ENST00000453441 PLCB1Q9NQ66 1216 aa9.28□□□□□ -0.92
COL28A1-205ENST00000453441 CLDND1Q9NY35 253 aa9.28□□□□□ -0.92
COL28A1-205ENST00000453441 TAB2Q9NYJ8 693 aa9.28□□□□□ -0.92
COL28A1-205ENST00000453441 APEX2Q9UBZ4 518 aa9.28□□□□□ -0.92
COL28A1-205ENST00000453441 CDV3Q9UKY7 258 aaKnown RBP9.28□□□□□ -0.92
COL28A1-205ENST00000453441 KIAA1257Q9ULG3 409 aa9.28□□□□□ -0.92
COL28A1-205ENST00000453441 POLIQ9UNA4 740 aa9.28□□□□□ -0.92
COL28A1-205ENST00000453441 FAM50BQ9Y247 325 aa9.28□□□□□ -0.92
COL28A1-205ENST00000453441 PCDHB5Q9Y5E4 795 aa9.28□□□□□ -0.92
COL28A1-205ENST00000453441 PCDHGC5Q9Y5F6 944 aa9.28□□□□□ -0.92
COL28A1-205ENST00000453441 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.27□□□□□ -0.93
COL28A1-205ENST00000453441 WDR27A2RRH5 827 aa9.27□□□□□ -0.93
COL28A1-205ENST00000453441 PRRG1O14668 218 aa9.27□□□□□ -0.93
COL28A1-205ENST00000453441 PER2O15055 1255 aa9.27□□□□□ -0.93
COL28A1-205ENST00000453441 XYLBO75191 536 aa9.27□□□□□ -0.93
COL28A1-205ENST00000453441 CILPO75339 1184 aa9.27□□□□□ -0.93
COL28A1-205ENST00000453441 SERPINC1P01008 464 aa9.27□□□□□ -0.93
COL28A1-205ENST00000453441 RPL17P18621 184 aaKnown RBP9.27□□□□□ -0.93
COL28A1-205ENST00000453441 PON1P27169 355 aa9.27□□□□□ -0.93
COL28A1-205ENST00000453441 MAGEA11P43364 429 aa9.27□□□□□ -0.93
COL28A1-205ENST00000453441 SLC39A12Q504Y0 691 aa9.27□□□□□ -0.93
COL28A1-205ENST00000453441 HSP90AA4PQ58FG1 418 aa9.27□□□□□ -0.93
COL28A1-205ENST00000453441 PPM1LQ5SGD2 360 aa9.27□□□□□ -0.93
COL28A1-205ENST00000453441 SPOPLQ6IQ16 392 aa9.27□□□□□ -0.93
COL28A1-205ENST00000453441 CES5AQ6NT32 575 aa9.27□□□□□ -0.93
COL28A1-205ENST00000453441 FAM171BQ6P995 826 aa9.27□□□□□ -0.93
COL28A1-205ENST00000453441 VSTM1Q6UX27 236 aa9.27□□□□□ -0.93
COL28A1-205ENST00000453441 RSPO2Q6UXX9 243 aaPredicted RBP9.27□□□□□ -0.93
COL28A1-205ENST00000453441 SCARA5Q6ZMJ2 495 aa9.27□□□□□ -0.93
COL28A1-205ENST00000453441 LUZP1Q86V48 1076 aa9.27□□□□□ -0.93
COL28A1-205ENST00000453441 OSTM1Q86WC4 334 aa9.27□□□□□ -0.93
COL28A1-205ENST00000453441 PALB2Q86YC2 1186 aa9.27□□□□□ -0.93
COL28A1-205ENST00000453441 SPATA2LQ8IUW3 424 aaPredicted RBP9.27□□□□□ -0.93
COL28A1-205ENST00000453441 PPM1KQ8N3J5 372 aa9.27□□□□□ -0.93
COL28A1-205ENST00000453441 LEMD2Q8NC56 503 aa9.27□□□□□ -0.93
COL28A1-205ENST00000453441 B3GALNT2Q8NCR0 500 aa9.27□□□□□ -0.93
COL28A1-205ENST00000453441 OR10T2Q8NGX3 314 aa9.27□□□□□ -0.93
COL28A1-205ENST00000453441 MYCBPAPQ8TBZ2 947 aa9.27□□□□□ -0.93
COL28A1-205ENST00000453441 NECTIN4Q96NY8 510 aa9.27□□□□□ -0.93
COL28A1-205ENST00000453441 PKMYT1Q99640 499 aa9.27□□□□□ -0.93
COL28A1-205ENST00000453441 ELOVL4Q9GZR5 314 aa9.27□□□□□ -0.93
COL28A1-205ENST00000453441 VPS16Q9H269 839 aa9.27□□□□□ -0.93
COL28A1-205ENST00000453441 IGFLR1Q9H665 355 aa9.27□□□□□ -0.93
COL28A1-205ENST00000453441 UBE2ZQ9H832 354 aaPredicted RBP9.27□□□□□ -0.93
COL28A1-205ENST00000453441 MAN1C1Q9NR34 630 aa9.27□□□□□ -0.93
COL28A1-205ENST00000453441 CISHQ9NSE2 258 aa9.27□□□□□ -0.93
COL28A1-205ENST00000453441 EHD2Q9NZN4 543 aa9.27□□□□□ -0.93
COL28A1-205ENST00000453441 ASB3Q9Y575 518 aa9.27□□□□□ -0.93
COL28A1-205ENST00000453441 PLXNA3P51805 1871 aa9.27□□□□□ -0.93
COL28A1-205ENST00000453441 A0A1B0GTH6 734 aa9.26□□□□□ -0.93
COL28A1-205ENST00000453441 A0A1W2PQC6 194 aa9.26□□□□□ -0.93
COL28A1-205ENST00000453441 MTMR11A4FU01 709 aa9.26□□□□□ -0.93
COL28A1-205ENST00000453441 ADAM12O43184 909 aa9.26□□□□□ -0.93
COL28A1-205ENST00000453441 CBFA2T2O43439 604 aa9.26□□□□□ -0.93
COL28A1-205ENST00000453441 GLP2RO95838 553 aa9.26□□□□□ -0.93
COL28A1-205ENST00000453441 LRG1P02750 347 aa9.26□□□□□ -0.93
COL28A1-205ENST00000453441 C8AP07357 584 aa9.26□□□□□ -0.93
COL28A1-205ENST00000453441 PAEPP09466 180 aa9.26□□□□□ -0.93
COL28A1-205ENST00000453441 WEE2P0C1S8 567 aa9.26□□□□□ -0.93
COL28A1-205ENST00000453441 EPCAMP16422 314 aa9.26□□□□□ -0.93
COL28A1-205ENST00000453441 PTPN1P18031 435 aaKnown RBP9.26□□□□□ -0.93
COL28A1-205ENST00000453441 MTHFRP42898 656 aa9.26□□□□□ -0.93
COL28A1-205ENST00000453441 NDST1P52848 882 aa9.26□□□□□ -0.93
COL28A1-205ENST00000453441 ARPP19P56211 112 aa9.26□□□□□ -0.93
COL28A1-205ENST00000453441 RPL10AP62906 217 aaKnown RBP9.26□□□□□ -0.93
COL28A1-205ENST00000453441 UBXN1Q04323 297 aa9.26□□□□□ -0.93
COL28A1-205ENST00000453441 ADCY1Q08828 1119 aa9.26□□□□□ -0.93
COL28A1-205ENST00000453441 VEPH1Q14D04 833 aa9.26□□□□□ -0.93
COL28A1-205ENST00000453441 STILQ15468 1287 aa9.26□□□□□ -0.93
COL28A1-205ENST00000453441 CCDC85BQ15834 202 aaPredicted RBP9.26□□□□□ -0.93
COL28A1-205ENST00000453441 LEXMQ3ZCV2 418 aa9.26□□□□□ -0.93
COL28A1-205ENST00000453441 SCARA3Q6AZY7 606 aa9.26□□□□□ -0.93
COL28A1-205ENST00000453441 APTXQ7Z2E3 356 aaKnown RBP9.26□□□□□ -0.93
COL28A1-205ENST00000453441 ITIH5Q86UX2 942 aa9.26□□□□□ -0.93
COL28A1-205ENST00000453441 ELMOD1Q8N336 334 aa9.26□□□□□ -0.93
COL28A1-205ENST00000453441 UBR7Q8N806 425 aa9.26□□□□□ -0.93
COL28A1-205ENST00000453441 MSLNLQ96KJ4 702 aa9.26□□□□□ -0.93
COL28A1-205ENST00000453441 RIPOR3Q96MK2 946 aa9.26□□□□□ -0.93
COL28A1-205ENST00000453441 SDCBP2Q9H190 292 aa9.26□□□□□ -0.93
COL28A1-205ENST00000453441 CYP4F11Q9HBI6 524 aa9.26□□□□□ -0.93
COL28A1-205ENST00000453441 THEGQ9P2T0 379 aa9.26□□□□□ -0.93
COL28A1-205ENST00000453441 CD207Q9UJ71 328 aa9.26□□□□□ -0.93
COL28A1-205ENST00000453441 CNTN6Q9UQ52 1028 aa9.26□□□□□ -0.93
COL28A1-205ENST00000453441 INSL5Q9Y5Q6 135 aa9.26□□□□□ -0.93
COL28A1-205ENST00000453441 TBX10O75333 385 aa9.25□□□□□ -0.93
COL28A1-205ENST00000453441 FGF19O95750 216 aa9.25□□□□□ -0.93
COL28A1-205ENST00000453441 PDGFRBP09619 1106 aa9.25□□□□□ -0.93
COL28A1-205ENST00000453441 HAPLN1P10915 354 aaPredicted RBP9.25□□□□□ -0.93
COL28A1-205ENST00000453441 ATP1A3P13637 1013 aa9.25□□□□□ -0.93
COL28A1-205ENST00000453441 CD58P19256 250 aa9.25□□□□□ -0.93
COL28A1-205ENST00000453441 SLC9A1P19634 815 aa9.25□□□□□ -0.93
COL28A1-205ENST00000453441 ACAT1P24752 427 aaKnown RBP9.25□□□□□ -0.93
COL28A1-205ENST00000453441 LMO2P25791 158 aa9.25□□□□□ -0.93
COL28A1-205ENST00000453441 LTBRP36941 435 aa9.25□□□□□ -0.93
COL28A1-205ENST00000453441 RAP1GAPP47736 663 aa9.25□□□□□ -0.93
COL28A1-205ENST00000453441 ALDH1A3P47895 512 aa9.25□□□□□ -0.93
COL28A1-205ENST00000453441 EPHB3P54753 998 aa9.25□□□□□ -0.93
COL28A1-205ENST00000453441 CDH8P55286 799 aa9.25□□□□□ -0.93
COL28A1-205ENST00000453441 SLC8A3P57103 927 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms