RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 CEP295NLQ96MC4 621 aa15.5■□□□□ 0.07
NCKIPSD-207ENST00000453349 ASB2Q96Q27 587 aa15.5■□□□□ 0.07
NCKIPSD-207ENST00000453349 CORO1BQ9BR76 489 aa15.5■□□□□ 0.07
NCKIPSD-207ENST00000453349 STK33Q9BYT3 514 aa15.5■□□□□ 0.07
NCKIPSD-207ENST00000453349 ZNF518BQ9C0D4 1074 aa15.5■□□□□ 0.07
NCKIPSD-207ENST00000453349 IFNKQ9P0W0 207 aa15.5■□□□□ 0.07
NCKIPSD-207ENST00000453349 CEP72Q9P209 647 aa15.5■□□□□ 0.07
NCKIPSD-207ENST00000453349 DNMT3BQ9UBC3 853 aaKnown RBP15.5■□□□□ 0.07
NCKIPSD-207ENST00000453349 FHOD1Q9Y613 1164 aa15.5■□□□□ 0.07
NCKIPSD-207ENST00000453349 A0A1W2PQC6 194 aa15.49■□□□□ 0.07
NCKIPSD-207ENST00000453349 FOXN3O00409 490 aaPredicted RBP15.49■□□□□ 0.07
NCKIPSD-207ENST00000453349 ZNF197O14709 1029 aa15.49■□□□□ 0.07
NCKIPSD-207ENST00000453349 MED7O43513 233 aa15.49■□□□□ 0.07
NCKIPSD-207ENST00000453349 FAM200BP0CF97 657 aa15.49■□□□□ 0.07
NCKIPSD-207ENST00000453349 ATF6P18850 670 aa15.49■□□□□ 0.07
NCKIPSD-207ENST00000453349 GPR15P49685 360 aa15.49■□□□□ 0.07
NCKIPSD-207ENST00000453349 BPIFB4P59827 614 aa15.49■□□□□ 0.07
NCKIPSD-207ENST00000453349 PLCB2Q00722 1185 aa15.49■□□□□ 0.07
NCKIPSD-207ENST00000453349 PTK2Q05397 1052 aa15.49■□□□□ 0.07
NCKIPSD-207ENST00000453349 STILQ15468 1287 aa15.49■□□□□ 0.07
NCKIPSD-207ENST00000453349 SMAD2Q15796 467 aaKnown RBP15.49■□□□□ 0.07
NCKIPSD-207ENST00000453349 ARHGAP17Q68EM7 881 aa15.49■□□□□ 0.07
NCKIPSD-207ENST00000453349 CACNA2D4Q7Z3S7 1137 aa15.49■□□□□ 0.07
NCKIPSD-207ENST00000453349 DNAJB7Q7Z6W7 309 aaPredicted RBP15.49■□□□□ 0.07
NCKIPSD-207ENST00000453349 LEMD2Q8NC56 503 aa15.49■□□□□ 0.07
NCKIPSD-207ENST00000453349 SHC3Q92529 594 aa15.49■□□□□ 0.07
NCKIPSD-207ENST00000453349 PSMG2Q969U7 264 aa15.49■□□□□ 0.07
NCKIPSD-207ENST00000453349 SPATA17Q96L03 361 aa15.49■□□□□ 0.07
NCKIPSD-207ENST00000453349 NAA15Q9BXJ9 866 aaKnown RBP15.49■□□□□ 0.07
NCKIPSD-207ENST00000453349 GANQ9H2C0 597 aa15.49■□□□□ 0.07
NCKIPSD-207ENST00000453349 WDR6Q9NNW5 1121 aaKnown RBP15.49■□□□□ 0.07
NCKIPSD-207ENST00000453349 HCFC1R1Q9NWW0 138 aa15.49■□□□□ 0.07
NCKIPSD-207ENST00000453349 EHD2Q9NZN4 543 aa15.49■□□□□ 0.07
NCKIPSD-207ENST00000453349 HESX1Q9UBX0 185 aa15.49■□□□□ 0.07
NCKIPSD-207ENST00000453349 CDH23Q9H251 3354 aa15.48■□□□□ 0.07
NCKIPSD-207ENST00000453349 SLC38A8A6NNN8 435 aa15.48■□□□□ 0.07
NCKIPSD-207ENST00000453349 F8VP50 259 aa15.48■□□□□ 0.07
NCKIPSD-207ENST00000453349 NOL4O94818 638 aa15.48■□□□□ 0.07
NCKIPSD-207ENST00000453349 FGF19O95750 216 aa15.48■□□□□ 0.07
NCKIPSD-207ENST00000453349 RHOP08100 348 aa15.48■□□□□ 0.07
NCKIPSD-207ENST00000453349 KCNQ1P51787 676 aa15.48■□□□□ 0.07
NCKIPSD-207ENST00000453349 MAP3K7CLP57077 242 aa15.48■□□□□ 0.07
NCKIPSD-207ENST00000453349 CNGA2Q16280 664 aa15.48■□□□□ 0.07
NCKIPSD-207ENST00000453349 PABPC1LQ4VXU2 614 aaKnown RBP15.48■□□□□ 0.07
NCKIPSD-207ENST00000453349 SDHAF4Q5VUM1 108 aa15.48■□□□□ 0.07
NCKIPSD-207ENST00000453349 PDZD4Q76G19 769 aaPredicted RBP15.48■□□□□ 0.07
NCKIPSD-207ENST00000453349 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.48■□□□□ 0.07
NCKIPSD-207ENST00000453349 GPR152Q8TDT2 470 aa15.48■□□□□ 0.07
NCKIPSD-207ENST00000453349 SPAG5Q96R06 1193 aa15.48■□□□□ 0.07
NCKIPSD-207ENST00000453349 KCNK16Q96T55 309 aa15.48■□□□□ 0.07
NCKIPSD-207ENST00000453349 DUSP16Q9BY84 665 aa15.48■□□□□ 0.07
NCKIPSD-207ENST00000453349 RBSNQ9H1K0 784 aa15.48■□□□□ 0.07
NCKIPSD-207ENST00000453349 CSNK1G1Q9HCP0 422 aa15.48■□□□□ 0.07
NCKIPSD-207ENST00000453349 DMAP1Q9NPF5 467 aaPredicted RBP15.48■□□□□ 0.07
NCKIPSD-207ENST00000453349 NLRC4Q9NPP4 1024 aa15.48■□□□□ 0.07
NCKIPSD-207ENST00000453349 ASAH2Q9NR71 780 aa15.48■□□□□ 0.07
NCKIPSD-207ENST00000453349 KRT82Q9NSB4 513 aa15.48■□□□□ 0.07
NCKIPSD-207ENST00000453349 UXTQ9UBK9 157 aaPredicted RBP15.48■□□□□ 0.07
NCKIPSD-207ENST00000453349 AJAP1Q9UKB5 411 aaPredicted RBP15.48■□□□□ 0.07
NCKIPSD-207ENST00000453349 MAGED2Q9UNF1 606 aaPredicted RBP15.48■□□□□ 0.07
NCKIPSD-207ENST00000453349 CLUHO75153 1309 aa15.47■□□□□ 0.07
NCKIPSD-207ENST00000453349 CYP26A1O43174 497 aa15.47■□□□□ 0.07
NCKIPSD-207ENST00000453349 MYL4P12829 197 aa15.47■□□□□ 0.07
NCKIPSD-207ENST00000453349 IL9P15248 144 aa15.47■□□□□ 0.07
NCKIPSD-207ENST00000453349 FSHRP23945 695 aa15.47■□□□□ 0.07
NCKIPSD-207ENST00000453349 GNA15P30679 374 aa15.47■□□□□ 0.07
NCKIPSD-207ENST00000453349 STAT1P42224 750 aa15.47■□□□□ 0.07
NCKIPSD-207ENST00000453349 ZNF132P52740 706 aa15.47■□□□□ 0.07
NCKIPSD-207ENST00000453349 NTHL1P78549 312 aa15.47■□□□□ 0.07
NCKIPSD-207ENST00000453349 DENND5BQ6ZUT9 1274 aa15.47■□□□□ 0.07
NCKIPSD-207ENST00000453349 HS6ST3Q8IZP7 471 aa15.47■□□□□ 0.07
NCKIPSD-207ENST00000453349 NUP93Q8N1F7 819 aa15.47■□□□□ 0.07
NCKIPSD-207ENST00000453349 ANKRD52Q8NB46 1076 aa15.47■□□□□ 0.07
NCKIPSD-207ENST00000453349 FEZF2Q8TBJ5 459 aa15.47■□□□□ 0.07
NCKIPSD-207ENST00000453349 SMOQ99835 787 aa15.47■□□□□ 0.07
NCKIPSD-207ENST00000453349 NUP58Q9BVL2 599 aa15.47■□□□□ 0.07
NCKIPSD-207ENST00000453349 PHF7Q9BWX1 381 aaPredicted RBP15.47■□□□□ 0.07
NCKIPSD-207ENST00000453349 XPO4Q9C0E2 1151 aaKnown RBP15.47■□□□□ 0.07
NCKIPSD-207ENST00000453349 POMKQ9H5K3 350 aa15.47■□□□□ 0.07
NCKIPSD-207ENST00000453349 AVENQ9NQS1 362 aaPredicted RBP15.47■□□□□ 0.07
NCKIPSD-207ENST00000453349 CDH22Q9UJ99 828 aa15.47■□□□□ 0.07
NCKIPSD-207ENST00000453349 TSPAN16Q9UKR8 245 aa15.47■□□□□ 0.07
NCKIPSD-207ENST00000453349 THAP12O43422 761 aa15.46■□□□□ 0.07
NCKIPSD-207ENST00000453349 BEST1O76090 585 aa15.46■□□□□ 0.07
NCKIPSD-207ENST00000453349 NPR3P17342 541 aa15.46■□□□□ 0.07
NCKIPSD-207ENST00000453349 BRD2P25440 801 aaKnown RBP15.46■□□□□ 0.07
NCKIPSD-207ENST00000453349 CLCN1P35523 988 aa15.46■□□□□ 0.07
NCKIPSD-207ENST00000453349 CACNA2D1P54289 1103 aa15.46■□□□□ 0.07
NCKIPSD-207ENST00000453349 GOLGA7BQ2TAP0 167 aa15.46■□□□□ 0.07
NCKIPSD-207ENST00000453349 LCLAT1Q6UWP7 414 aa15.46■□□□□ 0.07
NCKIPSD-207ENST00000453349 CLEC20AQ6ZU45 233 aa15.46■□□□□ 0.07
NCKIPSD-207ENST00000453349 GAS2L3Q86XJ1 694 aa15.46■□□□□ 0.07
NCKIPSD-207ENST00000453349 FAM71AQ8IYT1 594 aa15.46■□□□□ 0.07
NCKIPSD-207ENST00000453349 ZNF606Q8WXB4 792 aa15.46■□□□□ 0.07
NCKIPSD-207ENST00000453349 TFAP2BQ92481 460 aa15.46■□□□□ 0.07
NCKIPSD-207ENST00000453349 UBXN6Q9BZV1 441 aa15.46■□□□□ 0.07
NCKIPSD-207ENST00000453349 COMMD8Q9NX08 183 aa15.46■□□□□ 0.07
NCKIPSD-207ENST00000453349 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.46■□□□□ 0.07
NCKIPSD-207ENST00000453349 MRPS23Q9Y3D9 190 aaKnown RBP15.46■□□□□ 0.07
NCKIPSD-207ENST00000453349 NR2E1Q9Y466 385 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms