RNA–Protein interactions for RNA: ENST00000452837.6

THUMPD3-206, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-206ENST00000452837 PTPN7P35236 360 aa13.18□□□□□ -0.3
THUMPD3-206ENST00000452837 ETV4P43268 484 aa13.18□□□□□ -0.3
THUMPD3-206ENST00000452837 ARL4CP56559 192 aa13.18□□□□□ -0.3
THUMPD3-206ENST00000452837 RCN1Q15293 331 aa13.18□□□□□ -0.3
THUMPD3-206ENST00000452837 HSF5Q4G112 596 aaPredicted RBP13.18□□□□□ -0.3
THUMPD3-206ENST00000452837 DNAJC9Q8WXX5 260 aa13.18□□□□□ -0.3
THUMPD3-206ENST00000452837 GPRASP2Q96D09 838 aa13.18□□□□□ -0.3
THUMPD3-206ENST00000452837 TSSK1BQ9BXA7 367 aa13.18□□□□□ -0.3
THUMPD3-206ENST00000452837 ZNF395Q9H8N7 513 aaPredicted RBP13.18□□□□□ -0.3
THUMPD3-206ENST00000452837 QTRT2Q9H974 415 aaKnown RBP13.18□□□□□ -0.3
THUMPD3-206ENST00000452837 XPO7Q9UIA9 1087 aaKnown RBP13.18□□□□□ -0.3
THUMPD3-206ENST00000452837 WDR81Q562E7 1941 aa13.18□□□□□ -0.3
THUMPD3-206ENST00000452837 RGPD3A6NKT7 1758 aaPredicted RBP13.18□□□□□ -0.3
THUMPD3-206ENST00000452837 RGPD4Q7Z3J3 1758 aa13.18□□□□□ -0.3
THUMPD3-206ENST00000452837 HAUS5O94927 633 aa13.18□□□□□ -0.3
THUMPD3-206ENST00000452837 ASS1P00966 412 aaKnown RBP13.18□□□□□ -0.3
THUMPD3-206ENST00000452837 CALB1P05937 261 aa13.18□□□□□ -0.3
THUMPD3-206ENST00000452837 TROVE2P10155 538 aaKnown RBP eCLIP13.18□□□□□ -0.3
THUMPD3-206ENST00000452837 PSMA2P25787 234 aa13.18□□□□□ -0.3
THUMPD3-206ENST00000452837 ELK3P41970 407 aa13.18□□□□□ -0.3
THUMPD3-206ENST00000452837 RASSF2P50749 326 aa13.18□□□□□ -0.3
THUMPD3-206ENST00000452837 TGFB2P61812 414 aa13.18□□□□□ -0.3
THUMPD3-206ENST00000452837 MAP3K10Q02779 954 aa13.18□□□□□ -0.3
THUMPD3-206ENST00000452837 SEPT7Q16181 437 aaKnown RBP13.18□□□□□ -0.3
THUMPD3-206ENST00000452837 SH2D5Q6ZV89 423 aa13.18□□□□□ -0.3
THUMPD3-206ENST00000452837 PRPF39Q86UA1 669 aaKnown RBP13.18□□□□□ -0.3
THUMPD3-206ENST00000452837 ALYREFQ86V81 257 aaKnown RBP13.18□□□□□ -0.3
THUMPD3-206ENST00000452837 PALM2Q8IXS6 379 aa13.18□□□□□ -0.3
THUMPD3-206ENST00000452837 DEPTORQ8TB45 409 aa13.18□□□□□ -0.3
THUMPD3-206ENST00000452837 LRRN4Q8WUT4 740 aa13.18□□□□□ -0.3
THUMPD3-206ENST00000452837 SKA1Q96BD8 255 aa13.18□□□□□ -0.3
THUMPD3-206ENST00000452837 ZNF333Q96JL9 665 aa13.18□□□□□ -0.3
THUMPD3-206ENST00000452837 BTBD10Q9BSF8 475 aa13.18□□□□□ -0.3
THUMPD3-206ENST00000452837 MECRQ9BV79 373 aa13.18□□□□□ -0.3
THUMPD3-206ENST00000452837 SSU72Q9NP77 194 aaKnown RBP13.18□□□□□ -0.3
THUMPD3-206ENST00000452837 SAR1AQ9NR31 198 aa13.18□□□□□ -0.3
THUMPD3-206ENST00000452837 ARHGEF4Q9NR80 690 aa13.18□□□□□ -0.3
THUMPD3-206ENST00000452837 TAS2R1Q9NYW7 299 aa13.18□□□□□ -0.3
THUMPD3-206ENST00000452837 FZD1Q9UP38 647 aa13.18□□□□□ -0.3
THUMPD3-206ENST00000452837 ARID2Q68CP9 1835 aa13.17□□□□□ -0.3
THUMPD3-206ENST00000452837 MYH9P35579 1960 aaKnown RBP13.17□□□□□ -0.3
THUMPD3-206ENST00000452837 FAM237BA0A1B0GVD1 139 aa13.17□□□□□ -0.3
THUMPD3-206ENST00000452837 E7ENQ6 273 aa13.17□□□□□ -0.3
THUMPD3-206ENST00000452837 E7ESA3 106 aa13.17□□□□□ -0.3
THUMPD3-206ENST00000452837 LUC7L3O95232 432 aaKnown RBP13.17□□□□□ -0.3
THUMPD3-206ENST00000452837 DLDP09622 509 aaKnown RBP13.17□□□□□ -0.3
THUMPD3-206ENST00000452837 PYGBP11216 843 aa13.17□□□□□ -0.3
THUMPD3-206ENST00000452837 BASP1P80723 227 aaKnown RBP13.17□□□□□ -0.3
THUMPD3-206ENST00000452837 KBTBD12Q3ZCT8 623 aa13.17□□□□□ -0.3
THUMPD3-206ENST00000452837 PHC3Q8NDX5 983 aa13.17□□□□□ -0.3
THUMPD3-206ENST00000452837 LPAR1Q92633 364 aa13.17□□□□□ -0.3
THUMPD3-206ENST00000452837 PIDD1Q9HB75 910 aa13.17□□□□□ -0.3
THUMPD3-206ENST00000452837 CTDP1Q9Y5B0 961 aaPredicted RBP13.17□□□□□ -0.3
THUMPD3-206ENST00000452837 LPXNO60711 386 aa13.17□□□□□ -0.3
THUMPD3-206ENST00000452837 TBX10O75333 385 aa13.17□□□□□ -0.3
THUMPD3-206ENST00000452837 DHRS4L1P0CG22 281 aa13.17□□□□□ -0.3
THUMPD3-206ENST00000452837 KDELR1P24390 212 aa13.17□□□□□ -0.3
THUMPD3-206ENST00000452837 RAP1GAPP47736 663 aa13.17□□□□□ -0.3
THUMPD3-206ENST00000452837 GCLCP48506 637 aaPredicted RBP13.17□□□□□ -0.3
THUMPD3-206ENST00000452837 NEK3P51956 506 aa13.17□□□□□ -0.3
THUMPD3-206ENST00000452837 ARFIP2P53365 341 aa13.17□□□□□ -0.3
THUMPD3-206ENST00000452837 MMRN1Q13201 1228 aa13.17□□□□□ -0.3
THUMPD3-206ENST00000452837 PIGHQ14442 188 aaPredicted RBP13.17□□□□□ -0.3
THUMPD3-206ENST00000452837 THEMIS2Q5TEJ8 643 aa13.17□□□□□ -0.3
THUMPD3-206ENST00000452837 FAM83AQ86UY5 434 aa13.17□□□□□ -0.3
THUMPD3-206ENST00000452837 ARMC2Q8NEN0 867 aa13.17□□□□□ -0.3
THUMPD3-206ENST00000452837 FAM136AQ96C01 138 aa13.17□□□□□ -0.3
THUMPD3-206ENST00000452837 PORCNQ9H237 461 aa13.17□□□□□ -0.3
THUMPD3-206ENST00000452837 VPS11Q9H270 941 aa13.17□□□□□ -0.3
THUMPD3-206ENST00000452837 DCLRE1BQ9H816 532 aa13.17□□□□□ -0.3
THUMPD3-206ENST00000452837 MAP3K20Q9NYL2 800 aaKnown RBP13.17□□□□□ -0.3
THUMPD3-206ENST00000452837 TCRBV9S1A1TA0A576 114 aa13.16□□□□□ -0.3
THUMPD3-206ENST00000452837 KBTBD13C9JR72 458 aa13.16□□□□□ -0.3
THUMPD3-206ENST00000452837 PHBP35232 272 aa13.16□□□□□ -0.3
THUMPD3-206ENST00000452837 PTK7Q13308 1070 aa13.16□□□□□ -0.3
THUMPD3-206ENST00000452837 PRKD1Q15139 912 aaPredicted RBP13.16□□□□□ -0.3
THUMPD3-206ENST00000452837 MDH1BQ5I0G3 518 aa13.16□□□□□ -0.3
THUMPD3-206ENST00000452837 SNX30Q5VWJ9 437 aa13.16□□□□□ -0.3
THUMPD3-206ENST00000452837 TMEM35BQ8NCS4 154 aa13.16□□□□□ -0.3
THUMPD3-206ENST00000452837 RSAD2Q8WXG1 361 aa13.16□□□□□ -0.3
THUMPD3-206ENST00000452837 TRIM55Q9BYV6 548 aa13.16□□□□□ -0.3
THUMPD3-206ENST00000452837 NMUR2Q9GZQ4 415 aa13.16□□□□□ -0.3
THUMPD3-206ENST00000452837 DDX56Q9NY93 547 aaKnown RBP13.16□□□□□ -0.3
THUMPD3-206ENST00000452837 WASF2Q9Y6W5 498 aa13.16□□□□□ -0.3
THUMPD3-206ENST00000452837 TM9SF1O15321 606 aa13.16□□□□□ -0.3
THUMPD3-206ENST00000452837 GYG2O15488 501 aa13.16□□□□□ -0.3
THUMPD3-206ENST00000452837 FAM189A1O60320 539 aa13.16□□□□□ -0.3
THUMPD3-206ENST00000452837 CCDC22O60826 627 aa13.16□□□□□ -0.3
THUMPD3-206ENST00000452837 ATG7O95352 703 aa13.16□□□□□ -0.3
THUMPD3-206ENST00000452837 PIGRP01833 764 aa13.16□□□□□ -0.3
THUMPD3-206ENST00000452837 MT-ND3P03897 115 aa13.16□□□□□ -0.3
THUMPD3-206ENST00000452837 MYL2P10916 166 aa13.16□□□□□ -0.3
THUMPD3-206ENST00000452837 ARL2P36404 184 aa13.16□□□□□ -0.3
THUMPD3-206ENST00000452837 XKR3Q5GH77 459 aa13.16□□□□□ -0.3
THUMPD3-206ENST00000452837 SH3PXD2AQ5TCZ1 1133 aa13.16□□□□□ -0.3
THUMPD3-206ENST00000452837 SNRNP48Q6IEG0 339 aaKnown RBP13.16□□□□□ -0.3
THUMPD3-206ENST00000452837 BBS12Q6ZW61 710 aa13.16□□□□□ -0.3
THUMPD3-206ENST00000452837 NIPA2Q8N8Q9 360 aa13.16□□□□□ -0.3
THUMPD3-206ENST00000452837 ZNF398Q8TD17 642 aa13.16□□□□□ -0.3
THUMPD3-206ENST00000452837 NSL1Q96IY1 281 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms