RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 SMARCD1Q96GM5 515 aa12.28□□□□□ -0.44
SCN9A-204ENST00000452182 GUCD1Q96NT3 240 aa12.28□□□□□ -0.44
SCN9A-204ENST00000452182 PGLYRP2Q96PD5 576 aa12.28□□□□□ -0.44
SCN9A-204ENST00000452182 CDX2Q99626 313 aaPredicted RBP12.28□□□□□ -0.44
SCN9A-204ENST00000452182 CSNK1G1Q9HCP0 422 aa12.28□□□□□ -0.44
SCN9A-204ENST00000452182 ACP6Q9NPH0 428 aa12.28□□□□□ -0.44
SCN9A-204ENST00000452182 MTMR10Q9NXD2 777 aa12.28□□□□□ -0.44
SCN9A-204ENST00000452182 ABI2Q9NYB9 513 aaPredicted RBP12.28□□□□□ -0.44
SCN9A-204ENST00000452182 NOCTQ9UK39 431 aaKnown RBP12.28□□□□□ -0.44
SCN9A-204ENST00000452182 PCDHGC3Q9UN70 934 aa12.28□□□□□ -0.44
SCN9A-204ENST00000452182 BZW2Q9Y6E2 419 aaKnown RBP12.28□□□□□ -0.44
SCN9A-204ENST00000452182 MYO7AQ13402 2215 aa12.28□□□□□ -0.44
SCN9A-204ENST00000452182 REV3LO60673 3130 aa12.28□□□□□ -0.44
SCN9A-204ENST00000452182 THAP12O43422 761 aa12.27□□□□□ -0.44
SCN9A-204ENST00000452182 PAPLNO95428 1278 aa12.27□□□□□ -0.44
SCN9A-204ENST00000452182 HAPLN1P10915 354 aaPredicted RBP12.27□□□□□ -0.44
SCN9A-204ENST00000452182 CCDC130P13994 396 aa12.27□□□□□ -0.44
SCN9A-204ENST00000452182 IGFBP4P22692 258 aa12.27□□□□□ -0.44
SCN9A-204ENST00000452182 BRD2P25440 801 aaKnown RBP12.27□□□□□ -0.44
SCN9A-204ENST00000452182 HYAL1Q12794 435 aa12.27□□□□□ -0.44
SCN9A-204ENST00000452182 DUSP4Q13115 394 aa12.27□□□□□ -0.44
SCN9A-204ENST00000452182 COL19A1Q14993 1142 aa12.27□□□□□ -0.44
SCN9A-204ENST00000452182 ASIC2Q16515 512 aa12.27□□□□□ -0.44
SCN9A-204ENST00000452182 PKDCCQ504Y2 493 aa12.27□□□□□ -0.44
SCN9A-204ENST00000452182 E4F1Q66K89 784 aaPredicted RBP12.27□□□□□ -0.44
SCN9A-204ENST00000452182 CCDC149Q6ZUS6 474 aa12.27□□□□□ -0.44
SCN9A-204ENST00000452182 EFHBQ8N7U6 833 aa12.27□□□□□ -0.44
SCN9A-204ENST00000452182 TC2NQ8N9U0 490 aa12.27□□□□□ -0.44
SCN9A-204ENST00000452182 ANP32BQ92688 251 aaKnown RBP12.27□□□□□ -0.44
SCN9A-204ENST00000452182 DUSP16Q9BY84 665 aa12.27□□□□□ -0.44
SCN9A-204ENST00000452182 ZNF518BQ9C0D4 1074 aa12.27□□□□□ -0.44
SCN9A-204ENST00000452182 CRISPLD1Q9H336 500 aa12.27□□□□□ -0.44
SCN9A-204ENST00000452182 CYP4F11Q9HBI6 524 aa12.27□□□□□ -0.44
SCN9A-204ENST00000452182 ABHD10Q9NUJ1 306 aa12.27□□□□□ -0.44
SCN9A-204ENST00000452182 HESX1Q9UBX0 185 aa12.27□□□□□ -0.44
SCN9A-204ENST00000452182 TSPAN16Q9UKR8 245 aa12.27□□□□□ -0.44
SCN9A-204ENST00000452182 CLDN5O00501 218 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 SEC24AO95486 1093 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 FAM200BP0CF97 657 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 EPCAMP16422 314 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 BDNFP23560 247 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 CYP2F1P24903 491 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 HOXA9P31269 272 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 BCAT1P54687 386 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 ADKP55263 362 aaKnown RBP12.26□□□□□ -0.45
SCN9A-204ENST00000452182 CDR2Q01850 454 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 HGSNATQ68CP4 663 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 CLEC20AQ6ZU45 233 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 NOP9Q86U38 636 aaKnown RBP12.26□□□□□ -0.45
SCN9A-204ENST00000452182 CASP10Q92851 521 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 C8orf48Q96LL4 319 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 SYT11Q9BT88 431 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 MED10Q9BTT4 135 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 UBXN6Q9BZV1 441 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 LHX5Q9H2C1 402 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 PNPLA8Q9NP80 782 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 KRT82Q9NSB4 513 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 SLC27A5Q9Y2P5 690 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 PATJQ8NI35 1801 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 PRRC2BQ5JSZ5 2229 aaKnown RBP12.26□□□□□ -0.45
SCN9A-204ENST00000452182 GOLGA6L6A8MZA4 724 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 PRRG1O14668 218 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 TRIM66O15016 1216 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 ZMYND10O75800 440 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 MICAL2O94851 1124 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 CALCAP01258 141 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 SERPING1P05155 500 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 C8AP07357 584 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 POU2F2P09086 479 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 SETSIPP0DME0 302 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 SRGAP2BP0DMP2 458 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 NPR3P17342 541 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 ADORA2BP29275 332 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 SLC8A3P57103 927 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 RPL10AP62906 217 aaKnown RBP12.26□□□□□ -0.45
SCN9A-204ENST00000452182 CDK17Q00537 523 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 ARID5AQ03989 594 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 KLHL30Q0D2K2 578 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 BST2Q10589 180 aaKnown RBP12.26□□□□□ -0.45
SCN9A-204ENST00000452182 PLD1Q13393 1074 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 CTC1Q2NKJ3 1217 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 TSR1Q2NL82 804 aaKnown RBP12.26□□□□□ -0.45
SCN9A-204ENST00000452182 GOLGA7BQ2TAP0 167 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 MGAT5BQ3V5L5 792 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 PPP1R15BQ5SWA1 713 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 LIN9Q5TKA1 542 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 WDR59Q6PJI9 974 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 TTC30AQ86WT1 665 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 MYLIPQ8WY64 445 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 SPATA17Q96L03 361 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 RHOBTB2Q9BYZ6 727 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 OCEL1Q9H607 264 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 DMAP1Q9NPF5 467 aaPredicted RBP12.26□□□□□ -0.45
SCN9A-204ENST00000452182 MAN1C1Q9NR34 630 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 TMEM30AQ9NV96 361 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 DZANK1Q9NVP4 752 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 ZNHIT6Q9NWK9 470 aaKnown RBP12.26□□□□□ -0.45
SCN9A-204ENST00000452182 ZDHHC7Q9NXF8 308 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 INSL5Q9Y5Q6 135 aa12.26□□□□□ -0.45
SCN9A-204ENST00000452182 MYH10P35580 1976 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms