RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 PLCB2Q00722 1185 aa13.33□□□□□ -0.28
CPSF4-208ENST00000452047 TNK2Q07912 1038 aa13.33□□□□□ -0.28
CPSF4-208ENST00000452047 DPYDQ12882 1025 aa13.33□□□□□ -0.28
CPSF4-208ENST00000452047 MAPRE1Q15691 268 aaKnown RBP13.33□□□□□ -0.28
CPSF4-208ENST00000452047 C1orf228Q6PIY5 440 aa13.33□□□□□ -0.28
CPSF4-208ENST00000452047 VSTM1Q6UX27 236 aa13.33□□□□□ -0.28
CPSF4-208ENST00000452047 MAMSTRQ6ZN01 415 aa13.33□□□□□ -0.28
CPSF4-208ENST00000452047 MON1AQ86VX9 555 aa13.33□□□□□ -0.28
CPSF4-208ENST00000452047 SCN4BQ8IWT1 228 aa13.33□□□□□ -0.28
CPSF4-208ENST00000452047 ADSSL1Q8N142 457 aa13.33□□□□□ -0.28
CPSF4-208ENST00000452047 MYCBPAPQ8TBZ2 947 aa13.33□□□□□ -0.28
CPSF4-208ENST00000452047 MRPS31Q92665 395 aaKnown RBP13.33□□□□□ -0.28
CPSF4-208ENST00000452047 NELL1Q92832 810 aa13.33□□□□□ -0.28
CPSF4-208ENST00000452047 SYAP1Q96A49 352 aaPredicted RBP13.33□□□□□ -0.28
CPSF4-208ENST00000452047 PCED1BQ96HM7 432 aa13.33□□□□□ -0.28
CPSF4-208ENST00000452047 SPATA17Q96L03 361 aa13.33□□□□□ -0.28
CPSF4-208ENST00000452047 CEP295NLQ96MC4 621 aa13.33□□□□□ -0.28
CPSF4-208ENST00000452047 FAM83CQ9BQN1 747 aa13.33□□□□□ -0.28
CPSF4-208ENST00000452047 IER2Q9BTL4 223 aa13.33□□□□□ -0.28
CPSF4-208ENST00000452047 KIF9Q9HAQ2 790 aa13.33□□□□□ -0.28
CPSF4-208ENST00000452047 TDP1Q9NUW8 608 aa13.33□□□□□ -0.28
CPSF4-208ENST00000452047 MAGEC2Q9UBF1 373 aaPredicted RBP13.33□□□□□ -0.28
CPSF4-208ENST00000452047 GPR179Q6PRD1 2367 aa13.32□□□□□ -0.28
CPSF4-208ENST00000452047 VNN1O95497 513 aa13.32□□□□□ -0.28
CPSF4-208ENST00000452047 LMNAP02545 664 aaKnown RBP13.32□□□□□ -0.28
CPSF4-208ENST00000452047 C4BPAP04003 597 aaKnown RBP13.32□□□□□ -0.28
CPSF4-208ENST00000452047 NR3C1P04150 777 aa13.32□□□□□ -0.28
CPSF4-208ENST00000452047 TDGF1P13385 188 aa13.32□□□□□ -0.28
CPSF4-208ENST00000452047 BDNFP23560 247 aa13.32□□□□□ -0.28
CPSF4-208ENST00000452047 GNL1P36915 607 aaPredicted RBP13.32□□□□□ -0.28
CPSF4-208ENST00000452047 KPNA1P52294 538 aaPredicted RBP13.32□□□□□ -0.28
CPSF4-208ENST00000452047 AP3M2P53677 418 aa13.32□□□□□ -0.28
CPSF4-208ENST00000452047 TNNC1P63316 161 aa13.32□□□□□ -0.28
CPSF4-208ENST00000452047 DLG4P78352 724 aa13.32□□□□□ -0.28
CPSF4-208ENST00000452047 CYP27A1Q02318 531 aa13.32□□□□□ -0.28
CPSF4-208ENST00000452047 CSTF1Q05048 431 aaKnown RBP13.32□□□□□ -0.28
CPSF4-208ENST00000452047 TRPC3Q13507 836 aa13.32□□□□□ -0.28
CPSF4-208ENST00000452047 GAS6Q14393 721 aa13.32□□□□□ -0.28
CPSF4-208ENST00000452047 ZNF268Q14587 947 aaPredicted RBP13.32□□□□□ -0.28
CPSF4-208ENST00000452047 MDH1BQ5I0G3 518 aa13.32□□□□□ -0.28
CPSF4-208ENST00000452047 KRBA2Q6ZNG9 492 aa13.32□□□□□ -0.28
CPSF4-208ENST00000452047 RALGPS2Q86X27 583 aaPredicted RBP13.32□□□□□ -0.28
CPSF4-208ENST00000452047 FSIP1Q8NA03 581 aa13.32□□□□□ -0.28
CPSF4-208ENST00000452047 ZBTB44Q8NCP5 570 aa13.32□□□□□ -0.28
CPSF4-208ENST00000452047 SLC22A12Q96S37 553 aa13.32□□□□□ -0.28
CPSF4-208ENST00000452047 SNX25Q9H3E2 840 aa13.32□□□□□ -0.28
CPSF4-208ENST00000452047 DPEP3Q9H4B8 488 aa13.32□□□□□ -0.28
CPSF4-208ENST00000452047 LMAN1LQ9HAT1 526 aa13.32□□□□□ -0.28
CPSF4-208ENST00000452047 TMEM30AQ9NV96 361 aa13.32□□□□□ -0.28
CPSF4-208ENST00000452047 TRAF3IP3Q9Y228 551 aa13.32□□□□□ -0.28
CPSF4-208ENST00000452047 USP46P62068 366 aa13.31□□□□□ -0.28
CPSF4-208ENST00000452047 BIRC3Q13489 604 aa13.31□□□□□ -0.28
CPSF4-208ENST00000452047 NCOA4Q13772 614 aa13.31□□□□□ -0.28
CPSF4-208ENST00000452047 ZNF699Q32M78 642 aa13.31□□□□□ -0.28
CPSF4-208ENST00000452047 C1orf220Q5T0J3 134 aa13.31□□□□□ -0.28
CPSF4-208ENST00000452047 TSSK4Q6SA08 328 aa13.31□□□□□ -0.28
CPSF4-208ENST00000452047 SUMF1Q8NBK3 374 aa13.31□□□□□ -0.28
CPSF4-208ENST00000452047 B3GALNT2Q8NCR0 500 aa13.31□□□□□ -0.28
CPSF4-208ENST00000452047 OR6B3Q8NGW1 331 aa13.31□□□□□ -0.28
CPSF4-208ENST00000452047 TTC8Q8TAM2 541 aa13.31□□□□□ -0.28
CPSF4-208ENST00000452047 CHFRQ96EP1 664 aa13.31□□□□□ -0.28
CPSF4-208ENST00000452047 TTLL2Q9BWV7 592 aa13.31□□□□□ -0.28
CPSF4-208ENST00000452047 SMYD3Q9H7B4 428 aa13.31□□□□□ -0.28
CPSF4-208ENST00000452047 GDPD2Q9HCC8 539 aa13.31□□□□□ -0.28
CPSF4-208ENST00000452047 HPS4Q9NQG7 708 aa13.31□□□□□ -0.28
CPSF4-208ENST00000452047 GKN1Q9NS71 199 aa13.31□□□□□ -0.28
CPSF4-208ENST00000452047 THG1LQ9NWX6 298 aaKnown RBP13.31□□□□□ -0.28
CPSF4-208ENST00000452047 GCNT4Q9P109 453 aa13.31□□□□□ -0.28
CPSF4-208ENST00000452047 NXF1Q9UBU9 619 aaKnown RBP13.31□□□□□ -0.28
CPSF4-208ENST00000452047 PCDHGA2Q9Y5H1 932 aa13.31□□□□□ -0.28
CPSF4-208ENST00000452047 C2orf78A6NCI8 922 aa13.3□□□□□ -0.28
CPSF4-208ENST00000452047 OTOL1A6NHN0 477 aaPredicted RBP13.3□□□□□ -0.28
CPSF4-208ENST00000452047 A8MXQ7 604 aa13.3□□□□□ -0.28
CPSF4-208ENST00000452047 F8VP50 259 aa13.3□□□□□ -0.28
CPSF4-208ENST00000452047 TRIM66O15016 1216 aa13.3□□□□□ -0.28
CPSF4-208ENST00000452047 KINO60870 393 aaKnown RBP13.3□□□□□ -0.28
CPSF4-208ENST00000452047 LILRB5O75023 590 aa13.3□□□□□ -0.28
CPSF4-208ENST00000452047 PHACTR2O75167 634 aa13.3□□□□□ -0.28
CPSF4-208ENST00000452047 ZNF202O95125 648 aa13.3□□□□□ -0.28
CPSF4-208ENST00000452047 PTPN1P18031 435 aaKnown RBP13.3□□□□□ -0.28
CPSF4-208ENST00000452047 GRIK1P39086 918 aa13.3□□□□□ -0.28
CPSF4-208ENST00000452047 CACNA2D1P54289 1103 aa13.3□□□□□ -0.28
CPSF4-208ENST00000452047 CDH8P55286 799 aa13.3□□□□□ -0.28
CPSF4-208ENST00000452047 NOP14P78316 857 aaKnown RBP13.3□□□□□ -0.28
CPSF4-208ENST00000452047 FAM160A1Q05DH4 1040 aa13.3□□□□□ -0.28
CPSF4-208ENST00000452047 USP4Q13107 963 aa13.3□□□□□ -0.28
CPSF4-208ENST00000452047 CCINQ13939 588 aa13.3□□□□□ -0.28
CPSF4-208ENST00000452047 KCNB1Q14721 858 aa13.3□□□□□ -0.28
CPSF4-208ENST00000452047 ZNF77Q15935 545 aa13.3□□□□□ -0.28
CPSF4-208ENST00000452047 NFIL3Q16649 462 aa13.3□□□□□ -0.28
CPSF4-208ENST00000452047 ITPRIPL2Q3MIP1 535 aa13.3□□□□□ -0.28
CPSF4-208ENST00000452047 ZACNQ401N2 412 aa13.3□□□□□ -0.28
CPSF4-208ENST00000452047 TRIM68Q6AZZ1 485 aa13.3□□□□□ -0.28
CPSF4-208ENST00000452047 DENND5BQ6ZUT9 1274 aa13.3□□□□□ -0.28
CPSF4-208ENST00000452047 TMC2Q8TDI7 906 aa13.3□□□□□ -0.28
CPSF4-208ENST00000452047 ELMO3Q96BJ8 720 aa13.3□□□□□ -0.28
CPSF4-208ENST00000452047 C8orf48Q96LL4 319 aa13.3□□□□□ -0.28
CPSF4-208ENST00000452047 CYP2S1Q96SQ9 504 aa13.3□□□□□ -0.28
CPSF4-208ENST00000452047 ELOVL4Q9GZR5 314 aa13.3□□□□□ -0.28
CPSF4-208ENST00000452047 SDCBP2Q9H190 292 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 152.3 ms