RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 CHMP6Q96FZ7 201 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 PGM2Q96G03 612 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 RSRC1Q96IZ7 334 aaKnown RBP4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 MS4A14Q96JA4 679 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 PBKQ96KB5 322 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 CNOT6LQ96LI5 555 aaKnown RBP4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 CCDC140Q96MF4 163 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 SH3GL3Q99963 347 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 TGIF2Q9GZN2 237 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 KLC2Q9H0B6 622 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 NEUROG2Q9H2A3 272 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 RNF41Q9H4P4 317 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 CAPN10Q9HC96 672 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 POLD4Q9HCU8 107 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 PPANQ9NQ55 473 aaKnown RBP4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 CLDND1Q9NY35 253 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 ETAA1Q9NY74 926 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 TTC7AQ9ULT0 858 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 WASF3Q9UPY6 502 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 INPP5FQ9Y2H2 1132 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 STXBP5LQ9Y2K9 1186 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 TSC22D4Q9Y3Q8 395 aa4.47□□□□□ -1.69
HMGB3P22-202ENST00000451823 MYH1P12882 1939 aa4.46□□□□□ -1.69
HMGB3P22-202ENST00000451823 ANKRD36CQ5JPF3 1778 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 ESYT3A0FGR9 886 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 LRRC53A6NM62 1247 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 H7BY64 318 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 CCDC188H7C350 402 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 LAD1O00515 517 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 ADAMTS3O15072 1205 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 SMAD7O15105 426 aaKnown RBP4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 PALMO75781 387 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 NOL4O94818 638 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 SNUPNO95149 360 aaKnown RBP4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 MBD4O95243 580 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 PLEKHA8P1O95397 391 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 ANP32DO95626 131 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 CALM1P0DP23 149 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 CALM2P0DP24 149 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 CALM3P0DP25 149 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 PCP11498 1178 aaKnown RBP4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 C6P13671 934 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 NQO1P15559 274 aaKnown RBP4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 PECAM1P16284 738 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 GNAZP19086 355 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 CCND1P24385 295 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 TMOD1P28289 359 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 CXCR5P32302 372 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 SLC1A4P43007 532 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 GDF5P43026 501 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 MATR3P43243 847 aaKnown RBP eCLIP4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 RAB27AP51159 221 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 GUCY2FP51841 1108 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 EIF3BP55884 814 aaKnown RBP4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 NCALDP61601 193 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 TNNC1P63316 161 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 SARNPP82979 210 aaKnown RBP4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 NFATC3Q12968 1075 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 PLS1Q14651 629 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 E2F5Q15329 346 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 CDSNQ15517 529 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 MAN2A1Q16706 1144 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 PFKFB3Q16875 520 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 CCDC57Q2TAC2 916 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 PHF19Q5T6S3 580 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 CCDC181Q5TID7 509 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 DENND5AQ6IQ26 1287 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 TRMT10BQ6PF06 316 aaKnown RBP4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 TMC5Q6UXY8 1006 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 LRRC55Q6ZSA7 311 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 ASRGL1Q7L266 308 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 CEP57Q86XR8 500 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 C2CD5Q86YS7 1000 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 FAM178BQ8IXR5 827 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 PALM2Q8IXS6 379 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 ZC3H3Q8IXZ2 948 aaKnown RBP4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 Q8N1X5 172 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 CSGALNACT2Q8N6G5 542 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 LRRC57Q8N9N7 239 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 CCDC63Q8NA47 563 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 KIAA0895Q8NCT3 520 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 CFAP61Q8NHU2 1237 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 AGAP11Q8TF27 550 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 ATP8B4Q8TF62 1192 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 ZFAND2BQ8WV99 257 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 SPAG5Q96R06 1193 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 KRT12Q99456 494 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 MRIQ9BWK5 157 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 JAM3Q9BX67 310 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 TRIM9Q9C026 710 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 NAPBQ9H115 298 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 SLITRK6Q9H5Y7 841 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 SH3GLB2Q9NR46 395 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 ARHGEF3Q9NR81 526 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 PANK4Q9NVE7 773 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 DTLQ9NZJ0 730 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 AIPL1Q9NZN9 384 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 MAGEC2Q9UBF1 373 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 RBPJLQ9UBG7 517 aa4.46□□□□□ -1.7
HMGB3P22-202ENST00000451823 SWAP70Q9UH65 585 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms