RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 ZBTB44Q8NCP5 570 aa13.21□□□□□ -0.29
MSH5-209ENST00000450148 MYCBPAPQ8TBZ2 947 aa13.21□□□□□ -0.29
MSH5-209ENST00000450148 CSGALNACT1Q8TDX6 532 aa13.21□□□□□ -0.29
MSH5-209ENST00000450148 MSANTD3Q96H12 275 aa13.21□□□□□ -0.29
MSH5-209ENST00000450148 SPATA17Q96L03 361 aa13.21□□□□□ -0.29
MSH5-209ENST00000450148 SLC22A12Q96S37 553 aa13.21□□□□□ -0.29
MSH5-209ENST00000450148 MMS19Q96T76 1030 aa13.21□□□□□ -0.29
MSH5-209ENST00000450148 SCAND2PQ9GZW5 306 aaPredicted RBP13.21□□□□□ -0.29
MSH5-209ENST00000450148 DPEP3Q9H4B8 488 aa13.21□□□□□ -0.29
MSH5-209ENST00000450148 C8orf33Q9H7E9 229 aaPredicted RBP13.21□□□□□ -0.29
MSH5-209ENST00000450148 LMAN1LQ9HAT1 526 aa13.21□□□□□ -0.29
MSH5-209ENST00000450148 GDPD2Q9HCC8 539 aa13.21□□□□□ -0.29
MSH5-209ENST00000450148 HPS4Q9NQG7 708 aa13.21□□□□□ -0.29
MSH5-209ENST00000450148 MAGEC2Q9UBF1 373 aaPredicted RBP13.21□□□□□ -0.29
MSH5-209ENST00000450148 UXTQ9UBK9 157 aaPredicted RBP13.21□□□□□ -0.29
MSH5-209ENST00000450148 TRAF3IP3Q9Y228 551 aa13.21□□□□□ -0.29
MSH5-209ENST00000450148 R3HCC1Q9Y3T6 440 aaKnown RBP13.21□□□□□ -0.29
MSH5-209ENST00000450148 OTOGLQ3ZCN5 2332 aa13.21□□□□□ -0.3
MSH5-209ENST00000450148 KIAA1549LQ6ZVL6 1849 aa13.2□□□□□ -0.3
MSH5-209ENST00000450148 OTOL1A6NHN0 477 aaPredicted RBP13.2□□□□□ -0.3
MSH5-209ENST00000450148 LILRB5O75023 590 aa13.2□□□□□ -0.3
MSH5-209ENST00000450148 NR3C1P04150 777 aa13.2□□□□□ -0.3
MSH5-209ENST00000450148 CACNA2D1P54289 1103 aa13.2□□□□□ -0.3
MSH5-209ENST00000450148 USP46P62068 366 aa13.2□□□□□ -0.3
MSH5-209ENST00000450148 PLCB2Q00722 1185 aa13.2□□□□□ -0.3
MSH5-209ENST00000450148 CSTF1Q05048 431 aaKnown RBP13.2□□□□□ -0.3
MSH5-209ENST00000450148 ZNF268Q14587 947 aaPredicted RBP13.2□□□□□ -0.3
MSH5-209ENST00000450148 MAPRE1Q15691 268 aaKnown RBP13.2□□□□□ -0.3
MSH5-209ENST00000450148 TSSK4Q6SA08 328 aa13.2□□□□□ -0.3
MSH5-209ENST00000450148 RALGPS2Q86X27 583 aaPredicted RBP13.2□□□□□ -0.3
MSH5-209ENST00000450148 SCN4BQ8IWT1 228 aa13.2□□□□□ -0.3
MSH5-209ENST00000450148 ADSSL1Q8N142 457 aa13.2□□□□□ -0.3
MSH5-209ENST00000450148 FSIP1Q8NA03 581 aa13.2□□□□□ -0.3
MSH5-209ENST00000450148 SUMF1Q8NBK3 374 aa13.2□□□□□ -0.3
MSH5-209ENST00000450148 OR6B3Q8NGW1 331 aa13.2□□□□□ -0.3
MSH5-209ENST00000450148 TTC8Q8TAM2 541 aa13.2□□□□□ -0.3
MSH5-209ENST00000450148 MRPS31Q92665 395 aaKnown RBP13.2□□□□□ -0.3
MSH5-209ENST00000450148 ELMO3Q96BJ8 720 aa13.2□□□□□ -0.3
MSH5-209ENST00000450148 CEP295NLQ96MC4 621 aa13.2□□□□□ -0.3
MSH5-209ENST00000450148 TTLL2Q9BWV7 592 aa13.2□□□□□ -0.3
MSH5-209ENST00000450148 SDCBP2Q9H190 292 aa13.2□□□□□ -0.3
MSH5-209ENST00000450148 KIF9Q9HAQ2 790 aa13.2□□□□□ -0.3
MSH5-209ENST00000450148 GKN1Q9NS71 199 aa13.2□□□□□ -0.3
MSH5-209ENST00000450148 TDP1Q9NUW8 608 aa13.2□□□□□ -0.3
MSH5-209ENST00000450148 GCNT4Q9P109 453 aa13.2□□□□□ -0.3
MSH5-209ENST00000450148 VPS13AQ96RL7 3174 aa13.19□□□□□ -0.3
MSH5-209ENST00000450148 ZNF202O95125 648 aa13.19□□□□□ -0.3
MSH5-209ENST00000450148 LMNAP02545 664 aaKnown RBP13.19□□□□□ -0.3
MSH5-209ENST00000450148 PTPN1P18031 435 aaKnown RBP13.19□□□□□ -0.3
MSH5-209ENST00000450148 AVPR1AP37288 418 aa13.19□□□□□ -0.3
MSH5-209ENST00000450148 KPNA1P52294 538 aaPredicted RBP13.19□□□□□ -0.3
MSH5-209ENST00000450148 AP3M2P53677 418 aa13.19□□□□□ -0.3
MSH5-209ENST00000450148 CDH8P55286 799 aa13.19□□□□□ -0.3
MSH5-209ENST00000450148 TNNC1P63316 161 aa13.19□□□□□ -0.3
MSH5-209ENST00000450148 TRPC3Q13507 836 aa13.19□□□□□ -0.3
MSH5-209ENST00000450148 NFIL3Q16649 462 aa13.19□□□□□ -0.3
MSH5-209ENST00000450148 ZACNQ401N2 412 aa13.19□□□□□ -0.3
MSH5-209ENST00000450148 MDH1BQ5I0G3 518 aa13.19□□□□□ -0.3
MSH5-209ENST00000450148 TRIM68Q6AZZ1 485 aa13.19□□□□□ -0.3
MSH5-209ENST00000450148 C1orf228Q6PIY5 440 aa13.19□□□□□ -0.3
MSH5-209ENST00000450148 ZC3H14Q6PJT7 736 aaKnown RBP13.19□□□□□ -0.3
MSH5-209ENST00000450148 TMC2Q8TDI7 906 aa13.19□□□□□ -0.3
MSH5-209ENST00000450148 SYAP1Q96A49 352 aaPredicted RBP13.19□□□□□ -0.3
MSH5-209ENST00000450148 CYP2S1Q96SQ9 504 aa13.19□□□□□ -0.3
MSH5-209ENST00000450148 IER2Q9BTL4 223 aa13.19□□□□□ -0.3
MSH5-209ENST00000450148 SNX25Q9H3E2 840 aa13.19□□□□□ -0.3
MSH5-209ENST00000450148 SMYD3Q9H7B4 428 aa13.19□□□□□ -0.3
MSH5-209ENST00000450148 RBM12Q9NTZ6 932 aaKnown RBP13.19□□□□□ -0.3
MSH5-209ENST00000450148 NXF1Q9UBU9 619 aaKnown RBP13.19□□□□□ -0.3
MSH5-209ENST00000450148 ATP6V1DQ9Y5K8 247 aa13.19□□□□□ -0.3
MSH5-209ENST00000450148 MYOFQ9NZM1 2061 aa13.19□□□□□ -0.3
MSH5-209ENST00000450148 C2orf78A6NCI8 922 aa13.18□□□□□ -0.3
MSH5-209ENST00000450148 F8VP50 259 aa13.18□□□□□ -0.3
MSH5-209ENST00000450148 MAPK13O15264 365 aa13.18□□□□□ -0.3
MSH5-209ENST00000450148 TCF3P15923 654 aa13.18□□□□□ -0.3
MSH5-209ENST00000450148 GRIK1P39086 918 aa13.18□□□□□ -0.3
MSH5-209ENST00000450148 RAP1GAPP47736 663 aa13.18□□□□□ -0.3
MSH5-209ENST00000450148 MCCD1P59942 119 aaPredicted RBP13.18□□□□□ -0.3
MSH5-209ENST00000450148 NOP14P78316 857 aaKnown RBP13.18□□□□□ -0.3
MSH5-209ENST00000450148 ZXDBP98169 803 aa13.18□□□□□ -0.3
MSH5-209ENST00000450148 CYP27A1Q02318 531 aa13.18□□□□□ -0.3
MSH5-209ENST00000450148 FAM160A1Q05DH4 1040 aa13.18□□□□□ -0.3
MSH5-209ENST00000450148 USP4Q13107 963 aa13.18□□□□□ -0.3
MSH5-209ENST00000450148 RUNX3Q13761 415 aa13.18□□□□□ -0.3
MSH5-209ENST00000450148 NCOA4Q13772 614 aa13.18□□□□□ -0.3
MSH5-209ENST00000450148 CCINQ13939 588 aa13.18□□□□□ -0.3
MSH5-209ENST00000450148 KCNB1Q14721 858 aa13.18□□□□□ -0.3
MSH5-209ENST00000450148 PON2Q15165 354 aa13.18□□□□□ -0.3
MSH5-209ENST00000450148 ZNF77Q15935 545 aa13.18□□□□□ -0.3
MSH5-209ENST00000450148 ITPRIPL2Q3MIP1 535 aa13.18□□□□□ -0.3
MSH5-209ENST00000450148 ZCWPW2Q504Y3 356 aa13.18□□□□□ -0.3
MSH5-209ENST00000450148 DENND5BQ6ZUT9 1274 aa13.18□□□□□ -0.3
MSH5-209ENST00000450148 PAQR9Q6ZVX9 377 aa13.18□□□□□ -0.3
MSH5-209ENST00000450148 B3GALNT2Q8NCR0 500 aa13.18□□□□□ -0.3
MSH5-209ENST00000450148 C8orf48Q96LL4 319 aa13.18□□□□□ -0.3
MSH5-209ENST00000450148 B3GNT5Q9BYG0 378 aa13.18□□□□□ -0.3
MSH5-209ENST00000450148 ZNF518BQ9C0D4 1074 aa13.18□□□□□ -0.3
MSH5-209ENST00000450148 C2orf42Q9NWW7 574 aa13.18□□□□□ -0.3
MSH5-209ENST00000450148 ZSCAN32Q9NX65 697 aa13.18□□□□□ -0.3
MSH5-209ENST00000450148 PCDHGA2Q9Y5H1 932 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms