RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 TRPC7Q9HCX4 862 aa13.62□□□□□ -0.23
AC004540.1-204ENST00000449537 CALCOCO1Q9P1Z2 691 aa13.62□□□□□ -0.23
AC004540.1-204ENST00000449537 PTPN13Q12923 2485 aa13.61□□□□□ -0.23
AC004540.1-204ENST00000449537 A0A1B0GTW7 788 aa13.61□□□□□ -0.23
AC004540.1-204ENST00000449537 TNFSF14O43557 240 aa13.61□□□□□ -0.23
AC004540.1-204ENST00000449537 CILPO75339 1184 aa13.61□□□□□ -0.23
AC004540.1-204ENST00000449537 DEXIO95424 95 aa13.61□□□□□ -0.23
AC004540.1-204ENST00000449537 CER1O95813 267 aa13.61□□□□□ -0.23
AC004540.1-204ENST00000449537 CHRM1P11229 460 aaPredicted RBP13.61□□□□□ -0.23
AC004540.1-204ENST00000449537 C6P13671 934 aa13.61□□□□□ -0.23
AC004540.1-204ENST00000449537 MATKP42679 507 aa13.61□□□□□ -0.23
AC004540.1-204ENST00000449537 TNFRSF4P43489 277 aa13.61□□□□□ -0.23
AC004540.1-204ENST00000449537 SLC6A11P48066 632 aa13.61□□□□□ -0.23
AC004540.1-204ENST00000449537 CSRP3P50461 194 aa13.61□□□□□ -0.23
AC004540.1-204ENST00000449537 CXADRP78310 365 aa13.61□□□□□ -0.23
AC004540.1-204ENST00000449537 CCT2P78371 535 aaKnown RBP13.61□□□□□ -0.23
AC004540.1-204ENST00000449537 SMARCB1Q12824 385 aa13.61□□□□□ -0.23
AC004540.1-204ENST00000449537 USP4Q13107 963 aa13.61□□□□□ -0.23
AC004540.1-204ENST00000449537 SUZ12Q15022 739 aaKnown RBP13.61□□□□□ -0.23
AC004540.1-204ENST00000449537 GAB4Q2WGN9 574 aa13.61□□□□□ -0.23
AC004540.1-204ENST00000449537 C6orf118Q5T5N4 469 aa13.61□□□□□ -0.23
AC004540.1-204ENST00000449537 FMNL3Q8IVF7 1028 aa13.61□□□□□ -0.23
AC004540.1-204ENST00000449537 TMEM130Q8N3G9 435 aa13.61□□□□□ -0.23
AC004540.1-204ENST00000449537 OR10T2Q8NGX3 314 aa13.61□□□□□ -0.23
AC004540.1-204ENST00000449537 SPATA18Q8TC71 538 aa13.61□□□□□ -0.23
AC004540.1-204ENST00000449537 SPPL2BQ8TCT7 592 aa13.61□□□□□ -0.23
AC004540.1-204ENST00000449537 SLC22A12Q96S37 553 aa13.61□□□□□ -0.23
AC004540.1-204ENST00000449537 TARS2Q9BW92 718 aaKnown RBP13.61□□□□□ -0.23
AC004540.1-204ENST00000449537 ZCWPW1Q9H0M4 648 aa13.61□□□□□ -0.23
AC004540.1-204ENST00000449537 NCOA5Q9HCD5 579 aaKnown RBP13.61□□□□□ -0.23
AC004540.1-204ENST00000449537 POLD4Q9HCU8 107 aa13.61□□□□□ -0.23
AC004540.1-204ENST00000449537 ZDHHC4Q9NPG8 344 aa13.61□□□□□ -0.23
AC004540.1-204ENST00000449537 PCDHGB2Q9Y5G2 931 aa13.61□□□□□ -0.23
AC004540.1-204ENST00000449537 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.61□□□□□ -0.23
AC004540.1-204ENST00000449537 ARHGEF35A5YM69 484 aa13.6□□□□□ -0.23
AC004540.1-204ENST00000449537 SLC28A2O43868 658 aa13.6□□□□□ -0.23
AC004540.1-204ENST00000449537 CSH1P0DML2 217 aa13.6□□□□□ -0.23
AC004540.1-204ENST00000449537 CSH2P0DML3 217 aa13.6□□□□□ -0.23
AC004540.1-204ENST00000449537 ODC1P11926 461 aa13.6□□□□□ -0.23
AC004540.1-204ENST00000449537 HARSP12081 509 aaKnown RBP13.6□□□□□ -0.23
AC004540.1-204ENST00000449537 JUPP14923 745 aa13.6□□□□□ -0.23
AC004540.1-204ENST00000449537 GRIA2P42262 883 aa13.6□□□□□ -0.23
AC004540.1-204ENST00000449537 IL12RB1P42701 662 aa13.6□□□□□ -0.23
AC004540.1-204ENST00000449537 RHDQ02161 417 aa13.6□□□□□ -0.23
AC004540.1-204ENST00000449537 SPAG1Q07617 926 aa13.6□□□□□ -0.23
AC004540.1-204ENST00000449537 IL27RAQ6UWB1 636 aa13.6□□□□□ -0.23
AC004540.1-204ENST00000449537 DHRS13Q6UX07 377 aa13.6□□□□□ -0.23
AC004540.1-204ENST00000449537 PIK3AP1Q6ZUJ8 805 aa13.6□□□□□ -0.23
AC004540.1-204ENST00000449537 ARL14EPQ8N8R7 260 aaPredicted RBP13.6□□□□□ -0.23
AC004540.1-204ENST00000449537 SENP8Q96LD8 212 aa13.6□□□□□ -0.23
AC004540.1-204ENST00000449537 UXTQ9UBK9 157 aaPredicted RBP13.6□□□□□ -0.23
AC004540.1-204ENST00000449537 CYP8B1Q9UNU6 501 aa13.6□□□□□ -0.23
AC004540.1-204ENST00000449537 KCNJ14Q9UNX9 436 aa13.6□□□□□ -0.23
AC004540.1-204ENST00000449537 MUC22E2RYF6 1773 aaPredicted RBP13.6□□□□□ -0.23
AC004540.1-204ENST00000449537 STK36Q9NRP7 1315 aa13.6□□□□□ -0.23
AC004540.1-204ENST00000449537 SPATA31C1P0DKV0 1188 aa13.59□□□□□ -0.23
AC004540.1-204ENST00000449537 CPA1P15085 419 aa13.59□□□□□ -0.23
AC004540.1-204ENST00000449537 TCF3P15923 654 aa13.59□□□□□ -0.23
AC004540.1-204ENST00000449537 HDCP19113 662 aa13.59□□□□□ -0.23
AC004540.1-204ENST00000449537 CYP3A5P20815 502 aa13.59□□□□□ -0.23
AC004540.1-204ENST00000449537 EIF2DP41214 584 aaKnown RBP13.59□□□□□ -0.23
AC004540.1-204ENST00000449537 TXKP42681 527 aa13.59□□□□□ -0.23
AC004540.1-204ENST00000449537 LILRA4P59901 499 aa13.59□□□□□ -0.23
AC004540.1-204ENST00000449537 MESP2Q0VG99 397 aa13.59□□□□□ -0.23
AC004540.1-204ENST00000449537 PTPRNQ16849 979 aa13.59□□□□□ -0.23
AC004540.1-204ENST00000449537 HLA-BQ31612 363 aa13.59□□□□□ -0.23
AC004540.1-204ENST00000449537 COLEC12Q5KU26 742 aa13.59□□□□□ -0.23
AC004540.1-204ENST00000449537 MPZL3Q6UWV2 235 aa13.59□□□□□ -0.23
AC004540.1-204ENST00000449537 LRRTM3Q86VH5 581 aa13.59□□□□□ -0.23
AC004540.1-204ENST00000449537 CATSPER3Q86XQ3 398 aa13.59□□□□□ -0.23
AC004540.1-204ENST00000449537 ADGRG2Q8IZP9 1017 aa13.59□□□□□ -0.23
AC004540.1-204ENST00000449537 ENGASEQ8NFI3 743 aa13.59□□□□□ -0.23
AC004540.1-204ENST00000449537 SNIP1Q8TAD8 396 aaKnown RBP13.59□□□□□ -0.23
AC004540.1-204ENST00000449537 KCNV2Q8TDN2 545 aa13.59□□□□□ -0.23
AC004540.1-204ENST00000449537 LRRC15Q8TF66 581 aa13.59□□□□□ -0.23
AC004540.1-204ENST00000449537 KIFAP3Q92845 792 aa13.59□□□□□ -0.23
AC004540.1-204ENST00000449537 FGF11Q92914 225 aa13.59□□□□□ -0.23
AC004540.1-204ENST00000449537 TMEM134Q9H6X4 195 aa13.59□□□□□ -0.23
AC004540.1-204ENST00000449537 PLEKHA5Q9HAU0 1116 aa13.59□□□□□ -0.23
AC004540.1-204ENST00000449537 TUFT1Q9NNX1 390 aa13.59□□□□□ -0.23
AC004540.1-204ENST00000449537 ARHGEF4Q9NR80 690 aa13.59□□□□□ -0.23
AC004540.1-204ENST00000449537 ABI2Q9NYB9 513 aaPredicted RBP13.59□□□□□ -0.23
AC004540.1-204ENST00000449537 UBQLN1Q9UMX0 589 aaKnown RBP13.59□□□□□ -0.23
AC004540.1-204ENST00000449537 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.59□□□□□ -0.23
AC004540.1-204ENST00000449537 FNDC3AQ9Y2H6 1198 aaKnown RBP13.59□□□□□ -0.23
AC004540.1-204ENST00000449537 MGAQ8IWI9 3026 aa13.59□□□□□ -0.23
AC004540.1-204ENST00000449537 CABIN1Q9Y6J0 2220 aa13.59□□□□□ -0.23
AC004540.1-204ENST00000449537 CCDC169A6NNP5 214 aa13.58□□□□□ -0.24
AC004540.1-204ENST00000449537 CDC45O75419 566 aa13.58□□□□□ -0.24
AC004540.1-204ENST00000449537 PROZP22891 400 aa13.58□□□□□ -0.24
AC004540.1-204ENST00000449537 PAX3P23760 479 aa13.58□□□□□ -0.24
AC004540.1-204ENST00000449537 PDIA3P30101 505 aaKnown RBP13.58□□□□□ -0.24
AC004540.1-204ENST00000449537 TLE3Q04726 772 aa13.58□□□□□ -0.24
AC004540.1-204ENST00000449537 MYO1EQ12965 1108 aa13.58□□□□□ -0.24
AC004540.1-204ENST00000449537 ZBTB6Q15916 424 aa13.58□□□□□ -0.24
AC004540.1-204ENST00000449537 CALCRLQ16602 461 aa13.58□□□□□ -0.24
AC004540.1-204ENST00000449537 SEZ6Q53EL9 994 aa13.58□□□□□ -0.24
AC004540.1-204ENST00000449537 ZC2HC1CQ53FD0 456 aaPredicted RBP13.58□□□□□ -0.24
AC004540.1-204ENST00000449537 TRMT11Q7Z4G4 463 aaKnown RBP13.58□□□□□ -0.24
AC004540.1-204ENST00000449537 THEM5Q8N1Q8 247 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms