RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 SHKBP1Q8TBC3 707 aa14.21□□□□□ -0.13
SNHG4-201ENST00000448190 CYFIP2Q96F07 1278 aa14.21□□□□□ -0.13
SNHG4-201ENST00000448190 FUBP3Q96I24 572 aaKnown RBP eCLIP14.21□□□□□ -0.13
SNHG4-201ENST00000448190 NDST4Q9H3R1 872 aa14.21□□□□□ -0.13
SNHG4-201ENST00000448190 EPHX3Q9H6B9 360 aa14.21□□□□□ -0.13
SNHG4-201ENST00000448190 PCDHB4Q9Y5E5 795 aa14.21□□□□□ -0.13
SNHG4-201ENST00000448190 BDP1A6H8Y1 2624 aa14.2□□□□□ -0.14
SNHG4-201ENST00000448190 RNF225M0QZC1 329 aaPredicted RBP14.2□□□□□ -0.14
SNHG4-201ENST00000448190 AP1G2O75843 785 aa14.2□□□□□ -0.14
SNHG4-201ENST00000448190 BEST1O76090 585 aa14.2□□□□□ -0.14
SNHG4-201ENST00000448190 LETM1O95202 739 aaPredicted RBP14.2□□□□□ -0.14
SNHG4-201ENST00000448190 CDK11BP21127 795 aaKnown RBP14.2□□□□□ -0.14
SNHG4-201ENST00000448190 MAP3K7CLP57077 242 aa14.2□□□□□ -0.14
SNHG4-201ENST00000448190 USP46P62068 366 aa14.2□□□□□ -0.14
SNHG4-201ENST00000448190 CYP4F8P98187 520 aa14.2□□□□□ -0.14
SNHG4-201ENST00000448190 MYL5Q02045 173 aa14.2□□□□□ -0.14
SNHG4-201ENST00000448190 IFRD2Q12894 506 aaPredicted RBP14.2□□□□□ -0.14
SNHG4-201ENST00000448190 EXOC3L4Q17RC7 722 aa14.2□□□□□ -0.14
SNHG4-201ENST00000448190 SKOR2Q2VWA4 1001 aaPredicted RBP14.2□□□□□ -0.14
SNHG4-201ENST00000448190 PARM1Q6UWI2 310 aa14.2□□□□□ -0.14
SNHG4-201ENST00000448190 GBP6Q6ZN66 633 aa14.2□□□□□ -0.14
SNHG4-201ENST00000448190 FAM35AQ86V20 835 aa14.2□□□□□ -0.14
SNHG4-201ENST00000448190 JAKMIP2Q96AA8 810 aa14.2□□□□□ -0.14
SNHG4-201ENST00000448190 TMEM176AQ96HP8 235 aa14.2□□□□□ -0.14
SNHG4-201ENST00000448190 SLITRK6Q9H5Y7 841 aa14.2□□□□□ -0.14
SNHG4-201ENST00000448190 KCNK12Q9HB15 430 aa14.2□□□□□ -0.14
SNHG4-201ENST00000448190 IL21Q9HBE4 155 aa14.2□□□□□ -0.14
SNHG4-201ENST00000448190 GCNT4Q9P109 453 aa14.2□□□□□ -0.14
SNHG4-201ENST00000448190 CD19P15391 556 aa14.19□□□□□ -0.14
SNHG4-201ENST00000448190 ACO1P21399 889 aaKnown RBP14.19□□□□□ -0.14
SNHG4-201ENST00000448190 PON1P27169 355 aa14.19□□□□□ -0.14
SNHG4-201ENST00000448190 ANXA13P27216 316 aa14.19□□□□□ -0.14
SNHG4-201ENST00000448190 EPHA5P54756 1037 aa14.19□□□□□ -0.14
SNHG4-201ENST00000448190 NCAPHQ15003 741 aa14.19□□□□□ -0.14
SNHG4-201ENST00000448190 KRT31Q15323 416 aa14.19□□□□□ -0.14
SNHG4-201ENST00000448190 ARHGAP44Q17R89 818 aa14.19□□□□□ -0.14
SNHG4-201ENST00000448190 ZSCAN23Q3MJ62 389 aa14.19□□□□□ -0.14
SNHG4-201ENST00000448190 PPP1R26Q5T8A7 1209 aaPredicted RBP14.19□□□□□ -0.14
SNHG4-201ENST00000448190 CDKAL1Q5VV42 579 aa14.19□□□□□ -0.14
SNHG4-201ENST00000448190 TMEM270Q6UE05 265 aa14.19□□□□□ -0.14
SNHG4-201ENST00000448190 VSTM1Q6UX27 236 aa14.19□□□□□ -0.14
SNHG4-201ENST00000448190 FGF14Q92915 247 aa14.19□□□□□ -0.14
SNHG4-201ENST00000448190 KREMEN1Q96MU8 473 aa14.19□□□□□ -0.14
SNHG4-201ENST00000448190 SMOQ99835 787 aa14.19□□□□□ -0.14
SNHG4-201ENST00000448190 KXD1Q9BQD3 176 aa14.19□□□□□ -0.14
SNHG4-201ENST00000448190 FUCA2Q9BTY2 467 aa14.19□□□□□ -0.14
SNHG4-201ENST00000448190 AVENQ9NQS1 362 aaPredicted RBP14.19□□□□□ -0.14
SNHG4-201ENST00000448190 KRT82Q9NSB4 513 aa14.19□□□□□ -0.14
SNHG4-201ENST00000448190 EPS15L1Q9UBC2 864 aa14.19□□□□□ -0.14
SNHG4-201ENST00000448190 TRIOO75962 3097 aa14.19□□□□□ -0.14
SNHG4-201ENST00000448190 ABL1P00519 1130 aa14.18□□□□□ -0.14
SNHG4-201ENST00000448190 F11P03951 625 aa14.18□□□□□ -0.14
SNHG4-201ENST00000448190 CSH1P0DML2 217 aa14.18□□□□□ -0.14
SNHG4-201ENST00000448190 CSH2P0DML3 217 aa14.18□□□□□ -0.14
SNHG4-201ENST00000448190 KRT5P13647 590 aa14.18□□□□□ -0.14
SNHG4-201ENST00000448190 TBXAS1P24557 533 aaPredicted RBP14.18□□□□□ -0.14
SNHG4-201ENST00000448190 EEF1GP26641 437 aaKnown RBP14.18□□□□□ -0.14
SNHG4-201ENST00000448190 VIPR2P41587 438 aa14.18□□□□□ -0.14
SNHG4-201ENST00000448190 ZNF165P49910 485 aa14.18□□□□□ -0.14
SNHG4-201ENST00000448190 FAM78AQ5JUQ0 283 aa14.18□□□□□ -0.14
SNHG4-201ENST00000448190 GPR158Q5T848 1215 aa14.18□□□□□ -0.14
SNHG4-201ENST00000448190 TANGO2Q6ICL3 276 aa14.18□□□□□ -0.14
SNHG4-201ENST00000448190 TRIM65Q6PJ69 517 aa14.18□□□□□ -0.14
SNHG4-201ENST00000448190 TMEM150AQ86TG1 271 aa14.18□□□□□ -0.14
SNHG4-201ENST00000448190 DHX40Q8IX18 779 aaKnown RBP14.18□□□□□ -0.14
SNHG4-201ENST00000448190 UBR7Q8N806 425 aa14.18□□□□□ -0.14
SNHG4-201ENST00000448190 SCAMP5Q8TAC9 235 aa14.18□□□□□ -0.14
SNHG4-201ENST00000448190 FAXDC2Q96IV6 333 aa14.18□□□□□ -0.14
SNHG4-201ENST00000448190 SPATA17Q96L03 361 aa14.18□□□□□ -0.14
SNHG4-201ENST00000448190 C8orf48Q96LL4 319 aa14.18□□□□□ -0.14
SNHG4-201ENST00000448190 HNRNPABQ99729 332 aaKnown RBP14.18□□□□□ -0.14
SNHG4-201ENST00000448190 PLA2G2FQ9BZM2 168 aa14.18□□□□□ -0.14
SNHG4-201ENST00000448190 NAT10Q9H0A0 1025 aaKnown RBP14.18□□□□□ -0.14
SNHG4-201ENST00000448190 NUMBLQ9Y6R0 609 aa14.18□□□□□ -0.14
SNHG4-201ENST00000448190 TRIM66O15016 1216 aa14.17□□□□□ -0.14
SNHG4-201ENST00000448190 DCXO43602 365 aa14.17□□□□□ -0.14
SNHG4-201ENST00000448190 NARSO43776 548 aaKnown RBP14.17□□□□□ -0.14
SNHG4-201ENST00000448190 NOL4O94818 638 aa14.17□□□□□ -0.14
SNHG4-201ENST00000448190 FAM200BP0CF97 657 aa14.17□□□□□ -0.14
SNHG4-201ENST00000448190 ATP1A3P13637 1013 aa14.17□□□□□ -0.14
SNHG4-201ENST00000448190 USP8P40818 1118 aa14.17□□□□□ -0.14
SNHG4-201ENST00000448190 YWHAEP62258 255 aaKnown RBP14.17□□□□□ -0.14
SNHG4-201ENST00000448190 KCNMA1Q12791 1236 aa14.17□□□□□ -0.14
SNHG4-201ENST00000448190 TXNDC8Q6A555 127 aa14.17□□□□□ -0.14
SNHG4-201ENST00000448190 DENND5BQ6ZUT9 1274 aa14.17□□□□□ -0.14
SNHG4-201ENST00000448190 SLC44A3Q8N4M1 653 aa14.17□□□□□ -0.14
SNHG4-201ENST00000448190 TTC39CQ8N584 583 aa14.17□□□□□ -0.14
SNHG4-201ENST00000448190 MAB21L3Q8N8X9 362 aa14.17□□□□□ -0.14
SNHG4-201ENST00000448190 LEMD2Q8NC56 503 aa14.17□□□□□ -0.14
SNHG4-201ENST00000448190 ZMIZ2Q8NF64 920 aa14.17□□□□□ -0.14
SNHG4-201ENST00000448190 UBA3Q8TBC4 463 aa14.17□□□□□ -0.14
SNHG4-201ENST00000448190 TFAP2BQ92481 460 aa14.17□□□□□ -0.14
SNHG4-201ENST00000448190 SMARCD1Q96GM5 515 aa14.17□□□□□ -0.14
SNHG4-201ENST00000448190 CYP2S1Q96SQ9 504 aa14.17□□□□□ -0.14
SNHG4-201ENST00000448190 SLC46A2Q9BY10 475 aa14.17□□□□□ -0.14
SNHG4-201ENST00000448190 SMG9Q9H0W8 520 aaKnown RBP14.17□□□□□ -0.14
SNHG4-201ENST00000448190 HSD3B7Q9H2F3 369 aa14.17□□□□□ -0.14
SNHG4-201ENST00000448190 SIX2Q9NPC8 291 aa14.17□□□□□ -0.14
SNHG4-201ENST00000448190 GDE1Q9NZC3 331 aa14.17□□□□□ -0.14
SNHG4-201ENST00000448190 CHORDC1Q9UHD1 332 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms