RNA–Protein interactions for RNA: ENST00000447995.2

PTPN12-208, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-208ENST00000447995 OSBPL7Q9BZF2 842 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 FAM129AQ9BZQ8 928 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 FAM107BQ9H098 131 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 TSPYL1Q9H0U9 437 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 CARD9Q9H257 536 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 EPB41L4BQ9H329 900 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 PCIF1Q9H4Z3 704 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 TAF1DQ9H5J8 278 aaPredicted RBP4.34□□□□□ -1.71
PTPN12-208ENST00000447995 ACAD9Q9H845 621 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 KCNK12Q9HB15 430 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 ATP6V0A4Q9HBG4 840 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 EPB41L5Q9HCM4 733 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 TMEM8AQ9HCN3 771 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 POLD4Q9HCU8 107 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 C1orf112Q9NSG2 853 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.34□□□□□ -1.71
PTPN12-208ENST00000447995 HOXC10Q9NYD6 342 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 COL20A1Q9P218 1284 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 CTTNBP2NLQ9P2B4 639 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.34□□□□□ -1.71
PTPN12-208ENST00000447995 WRAP73Q9P2S5 460 aaPredicted RBP4.34□□□□□ -1.71
PTPN12-208ENST00000447995 UVRAGQ9P2Y5 699 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 SLC9A2Q9UBY0 812 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 FBXO40Q9UH90 709 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 CNOT7Q9UIV1 285 aaKnown RBP4.34□□□□□ -1.71
PTPN12-208ENST00000447995 HACL1Q9UJ83 578 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 RASAL2Q9UJF2 1139 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 AJAP1Q9UKB5 411 aaPredicted RBP4.34□□□□□ -1.71
PTPN12-208ENST00000447995 TPX2Q9ULW0 747 aaKnown RBP4.34□□□□□ -1.71
PTPN12-208ENST00000447995 TBX20Q9UMR3 447 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 ADAMTS5Q9UNA0 930 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 STXBP5LQ9Y2K9 1186 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 UTP11Q9Y3A2 253 aaKnown RBP4.34□□□□□ -1.71
PTPN12-208ENST00000447995 NOC2LQ9Y3T9 749 aaKnown RBP4.34□□□□□ -1.71
PTPN12-208ENST00000447995 ASTN2O75129 1339 aaPredicted RBP4.34□□□□□ -1.71
PTPN12-208ENST00000447995 IGSF9BQ9UPX0 1349 aa4.34□□□□□ -1.71
PTPN12-208ENST00000447995 RBBP6Q7Z6E9 1792 aaKnown RBP4.34□□□□□ -1.71
PTPN12-208ENST00000447995 DENND3A2RUS2 1198 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 ZNF233A6NK53 670 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 SRRM3A6NNA2 597 aaPredicted RBP4.33□□□□□ -1.72
PTPN12-208ENST00000447995 HMGB1P1B2RPK0 211 aaPredicted RBP4.33□□□□□ -1.72
PTPN12-208ENST00000447995 FZD9O00144 591 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 FOXN3O00409 490 aaPredicted RBP4.33□□□□□ -1.72
PTPN12-208ENST00000447995 RAD51CO43502 376 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 SHOX2O60902 331 aaPredicted RBP4.33□□□□□ -1.72
PTPN12-208ENST00000447995 PPFIA4O75335 1185 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 SYF2O95926 243 aaKnown RBP4.33□□□□□ -1.72
PTPN12-208ENST00000447995 CCNE2O96020 404 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 FTLP02792 175 aaPredicted RBP4.33□□□□□ -1.72
PTPN12-208ENST00000447995 SUPT20HL2P0C7V6 817 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 MYBL1P10243 752 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 MYBL2P10244 700 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 KCNA2P16389 499 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 ABCB4P21439 1286 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 CNGA1P29973 690 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 COPB2P35606 906 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 USP8P40818 1118 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 NPTX2P47972 431 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 GCLMP48507 274 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 CARSP49589 748 aaKnown RBP4.33□□□□□ -1.72
PTPN12-208ENST00000447995 PDE6CP51160 858 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 GPC3P51654 580 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 PRKCEQ02156 737 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 GCNT1Q02742 428 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 PPATQ06203 517 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 CYP24A1Q07973 514 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 PPP3CAQ08209 521 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 BIRC3Q13489 604 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 HLTFQ14527 1009 aaKnown RBP eCLIP4.33□□□□□ -1.72
PTPN12-208ENST00000447995 STXBP2Q15833 593 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 KCNA10Q16322 511 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 SNRNP35Q16560 246 aaKnown RBP4.33□□□□□ -1.72
PTPN12-208ENST00000447995 UGCGQ16739 394 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 TBC1D10BQ4KMP7 808 aaPredicted RBP4.33□□□□□ -1.72
PTPN12-208ENST00000447995 XKR3Q5GH77 459 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 SLFN12LQ6IEE8 588 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 GJB7Q6PEY0 223 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 RUFY4Q6ZNE9 571 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 MAEAQ7L5Y9 396 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 CROCCP2Q86T23 111 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 ZNF677Q86XU0 584 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 HOMEZQ8IX15 550 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 GSPT2Q8IYD1 628 aaKnown RBP4.33□□□□□ -1.72
PTPN12-208ENST00000447995 EXOC8Q8IYI6 725 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 FAM71AQ8IYT1 594 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 RPUSD2Q8IZ73 545 aaKnown RBP4.33□□□□□ -1.72
PTPN12-208ENST00000447995 GPD1LQ8N335 351 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 PPM1KQ8N3J5 372 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 METTL13Q8N6R0 699 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 FBXL13Q8NEE6 735 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 REPS2Q8NFH8 660 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 DNERQ8NFT8 737 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 LMO3Q8TAP4 145 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 PARD3BQ8TEW8 1205 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 HDAC7Q8WUI4 952 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 MAIP1Q8WWC4 291 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 CASKIN2Q8WXE0 1202 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 POMGNT1Q8WZA1 660 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 SHC3Q92529 594 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 KCNN1Q92952 543 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms