RNA–Protein interactions for RNA: ENST00000445089.5

VPS8-209, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-209ENST00000445089 LRIT1Q9P2V4 623 aa6.14□□□□□ -1.43
VPS8-209ENST00000445089 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.14□□□□□ -1.43
VPS8-209ENST00000445089 LRP6O75581 1613 aa6.14□□□□□ -1.43
VPS8-209ENST00000445089 PHLPP1O60346 1717 aa6.13□□□□□ -1.43
VPS8-209ENST00000445089 CCDC151A5D8V7 595 aa6.13□□□□□ -1.43
VPS8-209ENST00000445089 VPS4BO75351 444 aa6.13□□□□□ -1.43
VPS8-209ENST00000445089 ZBED1O96006 694 aa6.13□□□□□ -1.43
VPS8-209ENST00000445089 MYBP10242 640 aa6.13□□□□□ -1.43
VPS8-209ENST00000445089 CYP2C9P11712 490 aa6.13□□□□□ -1.43
VPS8-209ENST00000445089 PPP3CBP16298 524 aa6.13□□□□□ -1.43
VPS8-209ENST00000445089 EN2P19622 333 aaPredicted RBP6.13□□□□□ -1.43
VPS8-209ENST00000445089 CACNB3P54284 484 aa6.13□□□□□ -1.43
VPS8-209ENST00000445089 WNT3P56703 355 aa6.13□□□□□ -1.43
VPS8-209ENST00000445089 IQCB1Q15051 598 aa6.13□□□□□ -1.43
VPS8-209ENST00000445089 KRTAP15-1Q3LI76 137 aa6.13□□□□□ -1.43
VPS8-209ENST00000445089 PRR16Q569H4 304 aa6.13□□□□□ -1.43
VPS8-209ENST00000445089 SFRP4Q6FHJ7 346 aaPredicted RBP6.13□□□□□ -1.43
VPS8-209ENST00000445089 ZNF783Q6ZMS7 281 aa6.13□□□□□ -1.43
VPS8-209ENST00000445089 PCSK9Q8NBP7 692 aaKnown RBP6.13□□□□□ -1.43
VPS8-209ENST00000445089 B3GALNT2Q8NCR0 500 aa6.13□□□□□ -1.43
VPS8-209ENST00000445089 GPR150Q8NGU9 434 aa6.13□□□□□ -1.43
VPS8-209ENST00000445089 IL31RAQ8NI17 732 aa6.13□□□□□ -1.43
VPS8-209ENST00000445089 MYCBPAPQ8TBZ2 947 aa6.13□□□□□ -1.43
VPS8-209ENST00000445089 ACTRT2Q8TDY3 377 aa6.13□□□□□ -1.43
VPS8-209ENST00000445089 ANKS1AQ92625 1134 aa6.13□□□□□ -1.43
VPS8-209ENST00000445089 SUCLG2Q96I99 432 aa6.13□□□□□ -1.43
VPS8-209ENST00000445089 SLC46A1Q96NT5 459 aa6.13□□□□□ -1.43
VPS8-209ENST00000445089 NT5C1BQ96P26 610 aa6.13□□□□□ -1.43
VPS8-209ENST00000445089 C22orf23Q9BZE7 217 aa6.13□□□□□ -1.43
VPS8-209ENST00000445089 FOXJ2Q9P0K8 574 aa6.13□□□□□ -1.43
VPS8-209ENST00000445089 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.13□□□□□ -1.43
VPS8-209ENST00000445089 CDK12Q9NYV4 1490 aaPredicted RBP6.13□□□□□ -1.43
VPS8-209ENST00000445089 WDR27A2RRH5 827 aa6.12□□□□□ -1.43
VPS8-209ENST00000445089 A6NNZ2 444 aa6.12□□□□□ -1.43
VPS8-209ENST00000445089 ISM1B1AKI9 464 aa6.12□□□□□ -1.43
VPS8-209ENST00000445089 MYO1FO00160 1098 aa6.12□□□□□ -1.43
VPS8-209ENST00000445089 XRCC6P12956 609 aaKnown RBP eCLIP6.12□□□□□ -1.43
VPS8-209ENST00000445089 CD6P30203 668 aa6.12□□□□□ -1.43
VPS8-209ENST00000445089 LOXL3P58215 753 aa6.12□□□□□ -1.43
VPS8-209ENST00000445089 BOP1Q14137 746 aaKnown RBP6.12□□□□□ -1.43
VPS8-209ENST00000445089 SMN1Q16637 294 aaKnown RBP6.12□□□□□ -1.43
VPS8-209ENST00000445089 RBM20Q5T481 1227 aaKnown RBP6.12□□□□□ -1.43
VPS8-209ENST00000445089 SWSAP1Q6NVH7 229 aa6.12□□□□□ -1.43
VPS8-209ENST00000445089 OR6B3Q8NGW1 331 aa6.12□□□□□ -1.43
VPS8-209ENST00000445089 FBXL20Q96IG2 436 aa6.12□□□□□ -1.43
VPS8-209ENST00000445089 P2RX7Q99572 595 aaKnown RBP6.12□□□□□ -1.43
VPS8-209ENST00000445089 AMBRA1Q9C0C7 1298 aa6.12□□□□□ -1.43
VPS8-209ENST00000445089 SYNPO2LQ9H987 977 aa6.12□□□□□ -1.43
VPS8-209ENST00000445089 KLC4Q9NSK0 619 aa6.12□□□□□ -1.43
VPS8-209ENST00000445089 OBP2AQ9NY56 170 aa6.12□□□□□ -1.43
VPS8-209ENST00000445089 INO80Q9ULG1 1556 aaPredicted RBP6.12□□□□□ -1.43
VPS8-209ENST00000445089 COL16A1Q07092 1604 aaPredicted RBP6.11□□□□□ -1.43
VPS8-209ENST00000445089 UGGT1Q9NYU2 1555 aa6.11□□□□□ -1.43
VPS8-209ENST00000445089 A2MP01023 1474 aa6.11□□□□□ -1.43
VPS8-209ENST00000445089 TROQ12816 1431 aaPredicted RBP6.11□□□□□ -1.43
VPS8-209ENST00000445089 TNRQ92752 1358 aa6.11□□□□□ -1.43
VPS8-209ENST00000445089 SALL3Q9BXA9 1300 aa6.11□□□□□ -1.43
VPS8-209ENST00000445089 A0A087WWL8 130 aa6.11□□□□□ -1.43
VPS8-209ENST00000445089 DCLK1O15075 740 aa6.11□□□□□ -1.43
VPS8-209ENST00000445089 ATF3P18847 181 aa6.11□□□□□ -1.43
VPS8-209ENST00000445089 CHRM3P20309 590 aa6.11□□□□□ -1.43
VPS8-209ENST00000445089 PPIFP30405 207 aaKnown RBP6.11□□□□□ -1.43
VPS8-209ENST00000445089 CXCR5P32302 372 aa6.11□□□□□ -1.43
VPS8-209ENST00000445089 SLC11A2P49281 568 aa6.11□□□□□ -1.43
VPS8-209ENST00000445089 RARRES1P49788 294 aa6.11□□□□□ -1.43
VPS8-209ENST00000445089 HNRNPMP52272 730 aaKnown RBP eCLIP6.11□□□□□ -1.43
VPS8-209ENST00000445089 SIM1P81133 766 aaPredicted RBP6.11□□□□□ -1.43
VPS8-209ENST00000445089 GRM3Q14832 879 aa6.11□□□□□ -1.43
VPS8-209ENST00000445089 CNN3Q15417 329 aaKnown RBP6.11□□□□□ -1.43
VPS8-209ENST00000445089 LMBRD2Q68DH5 695 aaPredicted RBP6.11□□□□□ -1.43
VPS8-209ENST00000445089 GGT6Q6P531 493 aa6.11□□□□□ -1.43
VPS8-209ENST00000445089 C14orf80Q86SX3 495 aa6.11□□□□□ -1.43
VPS8-209ENST00000445089 TOR1AIP2Q8NFQ8 470 aa6.11□□□□□ -1.43
VPS8-209ENST00000445089 FAM136AQ96C01 138 aa6.11□□□□□ -1.43
VPS8-209ENST00000445089 ALG8Q9BVK2 526 aa6.11□□□□□ -1.43
VPS8-209ENST00000445089 TPSD1Q9BZJ3 242 aa6.11□□□□□ -1.43
VPS8-209ENST00000445089 XPR1Q9UBH6 696 aa6.11□□□□□ -1.43
VPS8-209ENST00000445089 DDX20Q9UHI6 824 aaKnown RBP6.11□□□□□ -1.43
VPS8-209ENST00000445089 SHOC2Q9UQ13 582 aa6.11□□□□□ -1.43
VPS8-209ENST00000445089 TMX2Q9Y320 296 aa6.11□□□□□ -1.43
VPS8-209ENST00000445089 ADGBQ8N7X0 1667 aa6.1□□□□□ -1.43
VPS8-209ENST00000445089 ATP7AQ04656 1500 aa6.1□□□□□ -1.43
VPS8-209ENST00000445089 MAP3K1Q13233 1512 aa6.1□□□□□ -1.43
VPS8-209ENST00000445089 MYO1CO00159 1063 aa6.1□□□□□ -1.43
VPS8-209ENST00000445089 BTN3A1O00481 513 aa6.1□□□□□ -1.43
VPS8-209ENST00000445089 TPP1O14773 563 aa6.1□□□□□ -1.43
VPS8-209ENST00000445089 ORC4O43929 436 aa6.1□□□□□ -1.43
VPS8-209ENST00000445089 KITP10721 976 aa6.1□□□□□ -1.43
VPS8-209ENST00000445089 ZNF134P52741 427 aa6.1□□□□□ -1.43
VPS8-209ENST00000445089 FAM193AP78312 1265 aa6.1□□□□□ -1.43
VPS8-209ENST00000445089 SATB1Q01826 763 aa6.1□□□□□ -1.43
VPS8-209ENST00000445089 KAZNQ674X7 775 aa6.1□□□□□ -1.43
VPS8-209ENST00000445089 APOA5Q6Q788 366 aa6.1□□□□□ -1.43
VPS8-209ENST00000445089 LAYNQ6UX15 382 aa6.1□□□□□ -1.43
VPS8-209ENST00000445089 TMEM108Q6UXF1 575 aa6.1□□□□□ -1.43
VPS8-209ENST00000445089 CAGE1Q8TC20 777 aa6.1□□□□□ -1.43
VPS8-209ENST00000445089 PTDSS2Q9BVG9 487 aa6.1□□□□□ -1.43
VPS8-209ENST00000445089 TPCN1Q9ULQ1 816 aa6.1□□□□□ -1.43
VPS8-209ENST00000445089 PZPP20742 1482 aa6.09□□□□□ -1.43
VPS8-209ENST00000445089 JCADQ9P266 1359 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms