RNA–Protein interactions for RNA: ENST00000445089.5

VPS8-209, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-209ENST00000445089 AEBP2Q6ZN18 517 aaPredicted RBP27.3■■□□□ 1.96
VPS8-209ENST00000445089 CHIC1Q5VXU3 224 aa26.71■■□□□ 1.87
VPS8-209ENST00000445089 PHF23Q9BUL5 403 aaPredicted RBP23.45■■□□□ 1.34
VPS8-209ENST00000445089 SENP3Q9H4L4 574 aaPredicted RBP23.25■■□□□ 1.31
VPS8-209ENST00000445089 PLPPR3Q6T4P5 718 aa21.71■■□□□ 1.07
VPS8-209ENST00000445089 FOXD1Q16676 465 aa21.51■■□□□ 1.03
VPS8-209ENST00000445089 PPP6R1Q9UPN7 881 aa20.67■□□□□ 0.9
VPS8-209ENST00000445089 ADRA2BP18089 450 aa20.64■□□□□ 0.89
VPS8-209ENST00000445089 PIAS4Q8N2W9 510 aaPredicted RBP20.28■□□□□ 0.84
VPS8-209ENST00000445089 MSH5O43196 834 aa19.91■□□□□ 0.78
VPS8-209ENST00000445089 PPP4R3CPQ6ZMV5 832 aa19.09■□□□□ 0.65
VPS8-209ENST00000445089 SCAF1Q9H7N4 1312 aaKnown RBP19■□□□□ 0.63
VPS8-209ENST00000445089 MAPK8IP2Q13387 824 aaPredicted RBP18.71■□□□□ 0.59
VPS8-209ENST00000445089 NCBP3Q53F19 620 aaKnown RBP18.65■□□□□ 0.58
VPS8-209ENST00000445089 KCNA4P22459 653 aa18.62■□□□□ 0.57
VPS8-209ENST00000445089 CNKSR2Q8WXI2 1034 aa18.6■□□□□ 0.57
VPS8-209ENST00000445089 DMRT2Q9Y5R5 561 aa18.55■□□□□ 0.56
VPS8-209ENST00000445089 NPM3O75607 178 aaKnown RBP18.32■□□□□ 0.52
VPS8-209ENST00000445089 RNF216Q9NWF9 866 aaPredicted RBP18.25■□□□□ 0.51
VPS8-209ENST00000445089 HOXD11P31277 338 aaPredicted RBP18.18■□□□□ 0.5
VPS8-209ENST00000445089 POTEDQ86YR6 584 aa18.05■□□□□ 0.48
VPS8-209ENST00000445089 DNAJC5BQ9UF47 199 aa17.95■□□□□ 0.46
VPS8-209ENST00000445089 SLC4A1APQ9BWU0 796 aaKnown RBP17.76■□□□□ 0.43
VPS8-209ENST00000445089 DCAF8L1A6NGE4 600 aa17.64■□□□□ 0.41
VPS8-209ENST00000445089 SLC4A2P04920 1241 aa17.29■□□□□ 0.36
VPS8-209ENST00000445089 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.26■□□□□ 0.35
VPS8-209ENST00000445089 EHMT2Q96KQ7 1210 aa17.18■□□□□ 0.34
VPS8-209ENST00000445089 FOXD4L1Q9NU39 408 aa17.18■□□□□ 0.34
VPS8-209ENST00000445089 ZBTB22O15209 634 aa17.13■□□□□ 0.33
VPS8-209ENST00000445089 CSRNP3Q8WYN3 585 aa17.04■□□□□ 0.32
VPS8-209ENST00000445089 RNF39Q9H2S5 420 aa17.04■□□□□ 0.32
VPS8-209ENST00000445089 U3KPZ7 1027 aaPredicted RBP17■□□□□ 0.31
VPS8-209ENST00000445089 MYCNP04198 464 aaPredicted RBP16.97■□□□□ 0.31
VPS8-209ENST00000445089 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.87■□□□□ 0.29
VPS8-209ENST00000445089 HNRNPUL2Q1KMD3 747 aaKnown RBP16.87■□□□□ 0.29
VPS8-209ENST00000445089 C1QBPQ07021 282 aaKnown RBP16.86■□□□□ 0.29
VPS8-209ENST00000445089 SAMD1Q6SPF0 538 aaPredicted RBP16.78■□□□□ 0.28
VPS8-209ENST00000445089 APLP2Q06481 763 aa16.69■□□□□ 0.26
VPS8-209ENST00000445089 ATXN8OSP0DMR3 200 aa16.66■□□□□ 0.26
VPS8-209ENST00000445089 CACNB1Q02641 598 aaPredicted RBP16.54■□□□□ 0.24
VPS8-209ENST00000445089 SPINK5Q9NQ38 1064 aaPredicted RBP16.48■□□□□ 0.23
VPS8-209ENST00000445089 ZNF219Q9P2Y4 722 aaPredicted RBP16.43■□□□□ 0.22
VPS8-209ENST00000445089 ATF5Q9Y2D1 282 aaPredicted RBP16.43■□□□□ 0.22
VPS8-209ENST00000445089 CAPN15O75808 1086 aa16.42■□□□□ 0.22
VPS8-209ENST00000445089 TRHP20396 242 aaPredicted RBP16.33■□□□□ 0.2
VPS8-209ENST00000445089 DSG3P32926 999 aa16.19■□□□□ 0.18
VPS8-209ENST00000445089 POLA2Q14181 598 aa16.09■□□□□ 0.17
VPS8-209ENST00000445089 ABCB7O75027 752 aa16.07■□□□□ 0.16
VPS8-209ENST00000445089 ZBTB12Q9Y330 459 aaPredicted RBP15.93■□□□□ 0.14
VPS8-209ENST00000445089 FBLN2P98095 1184 aa15.81■□□□□ 0.12
VPS8-209ENST00000445089 MKRN4PQ13434 485 aaPredicted RBP15.75■□□□□ 0.11
VPS8-209ENST00000445089 OSCARQ8IYS5 282 aa15.54■□□□□ 0.08
VPS8-209ENST00000445089 RBM42Q9BTD8 480 aaKnown RBP15.48■□□□□ 0.07
VPS8-209ENST00000445089 SPDYE2BA6NHP3 402 aa15.47■□□□□ 0.07
VPS8-209ENST00000445089 SPDYE6P0CI01 402 aa15.47■□□□□ 0.07
VPS8-209ENST00000445089 SPDYE2Q495Y8 402 aa15.47■□□□□ 0.07
VPS8-209ENST00000445089 SPDYE4A6NLX3 237 aa15.41■□□□□ 0.06
VPS8-209ENST00000445089 FKBP8Q14318 412 aa15.38■□□□□ 0.05
VPS8-209ENST00000445089 ZNF692Q9BU19 519 aaPredicted RBP15.35■□□□□ 0.05
VPS8-209ENST00000445089 SSUH2Q9Y2M2 353 aa15.35■□□□□ 0.05
VPS8-209ENST00000445089 AKT1S1Q96B36 256 aa15.28■□□□□ 0.04
VPS8-209ENST00000445089 PROM2Q8N271 834 aa15.22■□□□□ 0.03
VPS8-209ENST00000445089 PABPN1Q86U42 306 aaKnown RBP eCLIP15.14■□□□□ 0.01
VPS8-209ENST00000445089 REM2Q8IYK8 340 aaPredicted RBP15.09■□□□□ 0.01
VPS8-209ENST00000445089 SPDYE1Q8NFV5 336 aaPredicted RBP15.01□□□□□ -0.01
VPS8-209ENST00000445089 STAG3Q9UJ98 1225 aa14.97□□□□□ -0.01
VPS8-209ENST00000445089 FBXO3Q9UK99 471 aa14.93□□□□□ -0.02
VPS8-209ENST00000445089 PITPNM1O00562 1244 aa14.91□□□□□ -0.02
VPS8-209ENST00000445089 CLEC11AQ9Y240 323 aa14.84□□□□□ -0.03
VPS8-209ENST00000445089 CHRDL2Q6WN34 429 aa14.79□□□□□ -0.04
VPS8-209ENST00000445089 PRR29P0C7W0 189 aa14.76□□□□□ -0.05
VPS8-209ENST00000445089 VASPP50552 380 aaPredicted RBP14.68□□□□□ -0.06
VPS8-209ENST00000445089 FXR2P51116 673 aaKnown RBP eCLIP14.66□□□□□ -0.06
VPS8-209ENST00000445089 MIER1Q8N108 512 aa14.59□□□□□ -0.07
VPS8-209ENST00000445089 PIP4P2Q8N4L2 257 aa14.59□□□□□ -0.07
VPS8-209ENST00000445089 PLEKHG5O94827 1062 aa14.57□□□□□ -0.08
VPS8-209ENST00000445089 PLCD3Q8N3E9 789 aa14.57□□□□□ -0.08
VPS8-209ENST00000445089 CREBZFQ9NS37 354 aa14.57□□□□□ -0.08
VPS8-209ENST00000445089 PRKAR2AP13861 404 aaKnown RBP14.52□□□□□ -0.09
VPS8-209ENST00000445089 ZBTB47Q9UFB7 747 aaPredicted RBP14.5□□□□□ -0.09
VPS8-209ENST00000445089 CHADLQ6NUI6 762 aa14.46□□□□□ -0.09
VPS8-209ENST00000445089 IFNLR1Q8IU57 520 aaPredicted RBP14.46□□□□□ -0.09
VPS8-209ENST00000445089 MNX1P50219 401 aaPredicted RBP14.44□□□□□ -0.1
VPS8-209ENST00000445089 FARP1Q9Y4F1 1045 aaPredicted RBP14.41□□□□□ -0.1
VPS8-209ENST00000445089 KLHL34Q8N239 644 aa14.39□□□□□ -0.11
VPS8-209ENST00000445089 NPM1P06748 294 aaKnown RBP eCLIP14.37□□□□□ -0.11
VPS8-209ENST00000445089 SPOCK2Q92563 424 aa14.32□□□□□ -0.12
VPS8-209ENST00000445089 POTEHQ6S545 545 aa14.31□□□□□ -0.12
VPS8-209ENST00000445089 NUBP1P53384 320 aa14.25□□□□□ -0.13
VPS8-209ENST00000445089 C19orf67A6NJJ6 358 aa14.16□□□□□ -0.14
VPS8-209ENST00000445089 RASEFQ8IZ41 740 aa14.16□□□□□ -0.14
VPS8-209ENST00000445089 FAM212AQ96EL1 285 aa14.15□□□□□ -0.14
VPS8-209ENST00000445089 PAK3O75914 559 aaPredicted RBP14.12□□□□□ -0.15
VPS8-209ENST00000445089 GSE1Q14687 1217 aa14.12□□□□□ -0.15
VPS8-209ENST00000445089 CD44P16070 742 aaKnown RBP14.11□□□□□ -0.15
VPS8-209ENST00000445089 HAX1O00165 279 aa14.09□□□□□ -0.15
VPS8-209ENST00000445089 AMER1Q5JTC6 1135 aaPredicted RBP14.09□□□□□ -0.15
VPS8-209ENST00000445089 DCAF8Q5TAQ9 597 aa14.06□□□□□ -0.16
VPS8-209ENST00000445089 TSPYL2Q9H2G4 693 aaPredicted RBP14.05□□□□□ -0.16
VPS8-209ENST00000445089 CIZ1Q9ULV3 898 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms