RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 CRTAC1Q9NQ79 661 aa16.53■□□□□ 0.24
SEC13-213ENST00000445064 DUS2Q9NX74 493 aaKnown RBP16.53■□□□□ 0.24
SEC13-213ENST00000445064 CDH9Q9ULB4 789 aa16.53■□□□□ 0.24
SEC13-213ENST00000445064 SLC8A2Q9UPR5 921 aa16.53■□□□□ 0.24
SEC13-213ENST00000445064 WNT6Q9Y6F9 365 aa16.53■□□□□ 0.24
SEC13-213ENST00000445064 TRAV19A0A0A6YYK7 116 aa16.52■□□□□ 0.24
SEC13-213ENST00000445064 AXIN1O15169 862 aa16.52■□□□□ 0.24
SEC13-213ENST00000445064 CLIC2O15247 247 aa16.52■□□□□ 0.24
SEC13-213ENST00000445064 TGFB1I1O43294 461 aa16.52■□□□□ 0.24
SEC13-213ENST00000445064 GDF9O60383 454 aa16.52■□□□□ 0.24
SEC13-213ENST00000445064 ATG13O75143 517 aa16.52■□□□□ 0.24
SEC13-213ENST00000445064 RNF40O75150 1001 aa16.52■□□□□ 0.24
SEC13-213ENST00000445064 PPP6R2O75170 966 aa16.52■□□□□ 0.24
SEC13-213ENST00000445064 HDCP19113 662 aa16.52■□□□□ 0.24
SEC13-213ENST00000445064 GRIK1P39086 918 aa16.52■□□□□ 0.24
SEC13-213ENST00000445064 MAGEA11P43364 429 aa16.52■□□□□ 0.24
SEC13-213ENST00000445064 ASIC1P78348 528 aa16.52■□□□□ 0.24
SEC13-213ENST00000445064 AMPD3Q01432 767 aa16.52■□□□□ 0.24
SEC13-213ENST00000445064 ZNF77Q15935 545 aa16.52■□□□□ 0.24
SEC13-213ENST00000445064 FOXD4L5Q5VV16 416 aaPredicted RBP16.52■□□□□ 0.24
SEC13-213ENST00000445064 C4orf50Q6ZRC1 276 aa16.52■□□□□ 0.24
SEC13-213ENST00000445064 PRR23CQ6ZRP0 262 aa16.52■□□□□ 0.24
SEC13-213ENST00000445064 TRAPPC11Q7Z392 1133 aa16.52■□□□□ 0.24
SEC13-213ENST00000445064 FSIP1Q8NA03 581 aa16.52■□□□□ 0.24
SEC13-213ENST00000445064 OSCP1Q8WVF1 389 aa16.52■□□□□ 0.24
SEC13-213ENST00000445064 FOXD4L4Q8WXT5 416 aaPredicted RBP16.52■□□□□ 0.24
SEC13-213ENST00000445064 MYLPFQ96A32 169 aa16.52■□□□□ 0.24
SEC13-213ENST00000445064 ZNF396Q96N95 335 aaPredicted RBP16.52■□□□□ 0.24
SEC13-213ENST00000445064 P2RY13Q9BPV8 354 aa16.52■□□□□ 0.24
SEC13-213ENST00000445064 LINC00597Q9H2U6 94 aa16.52■□□□□ 0.24
SEC13-213ENST00000445064 KIAA1586Q9HCI6 787 aa16.52■□□□□ 0.24
SEC13-213ENST00000445064 GCNT4Q9P109 453 aa16.52■□□□□ 0.24
SEC13-213ENST00000445064 EIF3DO15371 548 aaKnown RBP eCLIP16.51■□□□□ 0.23
SEC13-213ENST00000445064 DLATP10515 647 aaKnown RBP16.51■□□□□ 0.23
SEC13-213ENST00000445064 TNNI1P19237 187 aa16.51■□□□□ 0.23
SEC13-213ENST00000445064 DRD1P21728 446 aa16.51■□□□□ 0.23
SEC13-213ENST00000445064 WARSP23381 471 aaKnown RBP16.51■□□□□ 0.23
SEC13-213ENST00000445064 CASP1P29466 404 aa16.51■□□□□ 0.23
SEC13-213ENST00000445064 IFNAR2P48551 515 aa16.51■□□□□ 0.23
SEC13-213ENST00000445064 CYP27A1Q02318 531 aa16.51■□□□□ 0.23
SEC13-213ENST00000445064 SHC4Q6S5L8 630 aa16.51■□□□□ 0.23
SEC13-213ENST00000445064 EPM2AIP1Q7L775 607 aaPredicted RBP16.51■□□□□ 0.23
SEC13-213ENST00000445064 WDR49Q8IV35 697 aa16.51■□□□□ 0.23
SEC13-213ENST00000445064 NELFCDQ8IXH7 590 aa16.51■□□□□ 0.23
SEC13-213ENST00000445064 CPA6Q8N4T0 437 aa16.51■□□□□ 0.23
SEC13-213ENST00000445064 SH3RF2Q8TEC5 729 aa16.51■□□□□ 0.23
SEC13-213ENST00000445064 MRPL45Q9BRJ2 306 aaKnown RBP16.51■□□□□ 0.23
SEC13-213ENST00000445064 ARRDC1-AS1Q9H2J1 176 aa16.51■□□□□ 0.23
SEC13-213ENST00000445064 CUEDC2Q9H467 287 aa16.51■□□□□ 0.23
SEC13-213ENST00000445064 AGPAT3Q9NRZ7 376 aa16.51■□□□□ 0.23
SEC13-213ENST00000445064 NME7Q9Y5B8 376 aa16.51■□□□□ 0.23
SEC13-213ENST00000445064 CACNA1AO00555 2505 aa16.5■□□□□ 0.23
SEC13-213ENST00000445064 CUTAO60888 179 aa16.5■□□□□ 0.23
SEC13-213ENST00000445064 RPP40O75818 363 aaKnown RBP16.5■□□□□ 0.23
SEC13-213ENST00000445064 GNL1P36915 607 aaPredicted RBP16.5■□□□□ 0.23
SEC13-213ENST00000445064 CYP2J2P51589 502 aa16.5■□□□□ 0.23
SEC13-213ENST00000445064 USP46P62068 366 aa16.5■□□□□ 0.23
SEC13-213ENST00000445064 PSMD2Q13200 908 aa16.5■□□□□ 0.23
SEC13-213ENST00000445064 KCNB1Q14721 858 aa16.5■□□□□ 0.23
SEC13-213ENST00000445064 MAPRE1Q15691 268 aaKnown RBP16.5■□□□□ 0.23
SEC13-213ENST00000445064 CCDC6Q16204 474 aa16.5■□□□□ 0.23
SEC13-213ENST00000445064 SNRNP35Q16560 246 aaKnown RBP16.5■□□□□ 0.23
SEC13-213ENST00000445064 EML3Q32P44 896 aa16.5■□□□□ 0.23
SEC13-213ENST00000445064 FOXD4L6Q3SYB3 417 aaPredicted RBP16.5■□□□□ 0.23
SEC13-213ENST00000445064 FAM26FQ5R3K3 315 aa16.5■□□□□ 0.23
SEC13-213ENST00000445064 VSTM1Q6UX27 236 aa16.5■□□□□ 0.23
SEC13-213ENST00000445064 FOXD4L3Q6VB84 417 aaPredicted RBP16.5■□□□□ 0.23
SEC13-213ENST00000445064 HS2ST1Q7LGA3 356 aa16.5■□□□□ 0.23
SEC13-213ENST00000445064 KBTBD6Q86V97 674 aa16.5■□□□□ 0.23
SEC13-213ENST00000445064 IQUBQ8NA54 791 aa16.5■□□□□ 0.23
SEC13-213ENST00000445064 NETO1Q8TDF5 533 aa16.5■□□□□ 0.23
SEC13-213ENST00000445064 GAB3Q8WWW8 586 aa16.5■□□□□ 0.23
SEC13-213ENST00000445064 ZNF516Q92618 1163 aa16.5■□□□□ 0.23
SEC13-213ENST00000445064 EZH1Q92800 747 aaPredicted RBP16.5■□□□□ 0.23
SEC13-213ENST00000445064 CD101Q93033 1021 aa16.5■□□□□ 0.23
SEC13-213ENST00000445064 CCDC127Q96BQ5 260 aa16.5■□□□□ 0.23
SEC13-213ENST00000445064 PCED1BQ96HM7 432 aa16.5■□□□□ 0.23
SEC13-213ENST00000445064 SPATA17Q96L03 361 aa16.5■□□□□ 0.23
SEC13-213ENST00000445064 C7orf25Q9BPX7 421 aa16.5■□□□□ 0.23
SEC13-213ENST00000445064 BACH2Q9BYV9 841 aa16.5■□□□□ 0.23
SEC13-213ENST00000445064 SNX25Q9H3E2 840 aa16.5■□□□□ 0.23
SEC13-213ENST00000445064 ATG2BQ96BY7 2078 aa16.5■□□□□ 0.23
SEC13-213ENST00000445064 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.49■□□□□ 0.23
SEC13-213ENST00000445064 CCDC163A0A0D9SF12 145 aa16.49■□□□□ 0.23
SEC13-213ENST00000445064 SLC30A4O14863 429 aa16.49■□□□□ 0.23
SEC13-213ENST00000445064 CCDC192P0DO97 292 aa16.49■□□□□ 0.23
SEC13-213ENST00000445064 ZXDBP98169 803 aa16.49■□□□□ 0.23
SEC13-213ENST00000445064 DNAH14Q0VDD8 3507 aa16.49■□□□□ 0.23
SEC13-213ENST00000445064 USP4Q13107 963 aa16.49■□□□□ 0.23
SEC13-213ENST00000445064 FBXO43Q4G163 708 aa16.49■□□□□ 0.23
SEC13-213ENST00000445064 MDH1BQ5I0G3 518 aa16.49■□□□□ 0.23
SEC13-213ENST00000445064 DENND5BQ6ZUT9 1274 aa16.49■□□□□ 0.23
SEC13-213ENST00000445064 CACNA2D4Q7Z3S7 1137 aa16.49■□□□□ 0.23
SEC13-213ENST00000445064 CAMKK1Q8N5S9 505 aa16.49■□□□□ 0.23
SEC13-213ENST00000445064 OR6B3Q8NGW1 331 aa16.49■□□□□ 0.23
SEC13-213ENST00000445064 RPLP0P6Q8NHW5 317 aa16.49■□□□□ 0.23
SEC13-213ENST00000445064 MYCBPAPQ8TBZ2 947 aa16.49■□□□□ 0.23
SEC13-213ENST00000445064 SCFD1Q8WVM8 642 aa16.49■□□□□ 0.23
SEC13-213ENST00000445064 ATP2A3Q93084 1043 aa16.49■□□□□ 0.23
SEC13-213ENST00000445064 EXOC4Q96A65 974 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms