RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 VNN2O95498 520 aa14.95□□□□□ -0.02
SSBP3-208ENST00000444533 MYL4P12829 197 aa14.95□□□□□ -0.02
SSBP3-208ENST00000444533 CCDC130P13994 396 aa14.95□□□□□ -0.02
SSBP3-208ENST00000444533 IL9P15248 144 aa14.95□□□□□ -0.02
SSBP3-208ENST00000444533 CDC25CP30307 473 aa14.95□□□□□ -0.02
SSBP3-208ENST00000444533 GBP2P32456 591 aaPredicted RBP14.95□□□□□ -0.02
SSBP3-208ENST00000444533 BPIFB4P59827 614 aa14.95□□□□□ -0.02
SSBP3-208ENST00000444533 SYCP1Q15431 976 aa14.95□□□□□ -0.02
SSBP3-208ENST00000444533 DDR2Q16832 855 aa14.95□□□□□ -0.02
SSBP3-208ENST00000444533 GET4Q7L5D6 327 aaPredicted RBP14.95□□□□□ -0.02
SSBP3-208ENST00000444533 DNAJB7Q7Z6W7 309 aaPredicted RBP14.95□□□□□ -0.02
SSBP3-208ENST00000444533 FMNL3Q8IVF7 1028 aa14.95□□□□□ -0.02
SSBP3-208ENST00000444533 ADHFE1Q8IWW8 467 aa14.95□□□□□ -0.02
SSBP3-208ENST00000444533 C12orf29Q8N999 325 aa14.95□□□□□ -0.02
SSBP3-208ENST00000444533 SLC4A11Q8NBS3 891 aa14.95□□□□□ -0.02
SSBP3-208ENST00000444533 RPGRIP1Q96KN7 1286 aa14.95□□□□□ -0.02
SSBP3-208ENST00000444533 SPATA17Q96L03 361 aa14.95□□□□□ -0.02
SSBP3-208ENST00000444533 SPAG5Q96R06 1193 aa14.95□□□□□ -0.02
SSBP3-208ENST00000444533 ZNF518BQ9C0D4 1074 aa14.95□□□□□ -0.02
SSBP3-208ENST00000444533 CRISPLD1Q9H336 500 aa14.95□□□□□ -0.02
SSBP3-208ENST00000444533 FAM207AQ9NSI2 230 aaPredicted RBP14.95□□□□□ -0.02
SSBP3-208ENST00000444533 CEP72Q9P209 647 aa14.95□□□□□ -0.02
SSBP3-208ENST00000444533 DNMT3BQ9UBC3 853 aaKnown RBP14.95□□□□□ -0.02
SSBP3-208ENST00000444533 USTQ9Y2C2 406 aa14.95□□□□□ -0.02
SSBP3-208ENST00000444533 ZFP37Q9Y6Q3 630 aaPredicted RBP14.95□□□□□ -0.02
SSBP3-208ENST00000444533 BRWD1Q9NSI6 2320 aa14.95□□□□□ -0.02
SSBP3-208ENST00000444533 COL6A3P12111 3177 aa14.95□□□□□ -0.02
SSBP3-208ENST00000444533 EYSQ5T1H1 3165 aa14.95□□□□□ -0.02
SSBP3-208ENST00000444533 F8VP50 259 aa14.94□□□□□ -0.02
SSBP3-208ENST00000444533 CBFA2T2O43439 604 aa14.94□□□□□ -0.02
SSBP3-208ENST00000444533 RTN3O95197 1032 aaPredicted RBP14.94□□□□□ -0.02
SSBP3-208ENST00000444533 UCHL3P15374 230 aa14.94□□□□□ -0.02
SSBP3-208ENST00000444533 SSTR3P32745 418 aaPredicted RBP14.94□□□□□ -0.02
SSBP3-208ENST00000444533 UBASH3AP57075 661 aa14.94□□□□□ -0.02
SSBP3-208ENST00000444533 PTK2Q05397 1052 aa14.94□□□□□ -0.02
SSBP3-208ENST00000444533 KLHDC7AQ5VTJ3 777 aa14.94□□□□□ -0.02
SSBP3-208ENST00000444533 DENND5BQ6ZUT9 1274 aa14.94□□□□□ -0.02
SSBP3-208ENST00000444533 CACNA2D4Q7Z3S7 1137 aa14.94□□□□□ -0.02
SSBP3-208ENST00000444533 FUKQ8N0W3 1084 aa14.94□□□□□ -0.02
SSBP3-208ENST00000444533 WHAMMQ8TF30 809 aa14.94□□□□□ -0.02
SSBP3-208ENST00000444533 ERGIC2Q96RQ1 377 aa14.94□□□□□ -0.02
SSBP3-208ENST00000444533 TWNKQ96RR1 684 aa14.94□□□□□ -0.02
SSBP3-208ENST00000444533 LPIN3Q9BQK8 851 aa14.94□□□□□ -0.02
SSBP3-208ENST00000444533 GPR88Q9GZN0 384 aa14.94□□□□□ -0.02
SSBP3-208ENST00000444533 HSD3B7Q9H2F3 369 aa14.94□□□□□ -0.02
SSBP3-208ENST00000444533 SLITRK6Q9H5Y7 841 aa14.94□□□□□ -0.02
SSBP3-208ENST00000444533 AVENQ9NQS1 362 aaPredicted RBP14.94□□□□□ -0.02
SSBP3-208ENST00000444533 HCFC1R1Q9NWW0 138 aa14.94□□□□□ -0.02
SSBP3-208ENST00000444533 NME7Q9Y5B8 376 aa14.94□□□□□ -0.02
SSBP3-208ENST00000444533 SLC38A8A6NNN8 435 aa14.93□□□□□ -0.02
SSBP3-208ENST00000444533 MICAL2O94851 1124 aa14.93□□□□□ -0.02
SSBP3-208ENST00000444533 CCDC172P0C7W6 258 aa14.93□□□□□ -0.02
SSBP3-208ENST00000444533 BMP1P13497 986 aa14.93□□□□□ -0.02
SSBP3-208ENST00000444533 NPR3P17342 541 aa14.93□□□□□ -0.02
SSBP3-208ENST00000444533 ATF6P18850 670 aa14.93□□□□□ -0.02
SSBP3-208ENST00000444533 PPP3CCP48454 512 aa14.93□□□□□ -0.02
SSBP3-208ENST00000444533 BCAT1P54687 386 aa14.93□□□□□ -0.02
SSBP3-208ENST00000444533 MAP3K7CLP57077 242 aa14.93□□□□□ -0.02
SSBP3-208ENST00000444533 FANCCQ00597 558 aa14.93□□□□□ -0.02
SSBP3-208ENST00000444533 KCNMA1Q12791 1236 aa14.93□□□□□ -0.02
SSBP3-208ENST00000444533 CCDC142Q17RM4 750 aa14.93□□□□□ -0.02
SSBP3-208ENST00000444533 PPP1R26Q5T8A7 1209 aaPredicted RBP14.93□□□□□ -0.02
SSBP3-208ENST00000444533 ARHGAP17Q68EM7 881 aa14.93□□□□□ -0.02
SSBP3-208ENST00000444533 GJB7Q6PEY0 223 aa14.93□□□□□ -0.02
SSBP3-208ENST00000444533 NUP93Q8N1F7 819 aa14.93□□□□□ -0.02
SSBP3-208ENST00000444533 RNF214Q8ND24 703 aa14.93□□□□□ -0.02
SSBP3-208ENST00000444533 GPR152Q8TDT2 470 aa14.93□□□□□ -0.02
SSBP3-208ENST00000444533 KAT5Q92993 513 aa14.93□□□□□ -0.02
SSBP3-208ENST00000444533 KREMEN1Q96MU8 473 aa14.93□□□□□ -0.02
SSBP3-208ENST00000444533 SLITRK1Q96PX8 696 aa14.93□□□□□ -0.02
SSBP3-208ENST00000444533 STK33Q9BYT3 514 aa14.93□□□□□ -0.02
SSBP3-208ENST00000444533 PDCL3Q9H2J4 239 aa14.93□□□□□ -0.02
SSBP3-208ENST00000444533 ATXN3LQ9H3M9 355 aa14.93□□□□□ -0.02
SSBP3-208ENST00000444533 FBXO44Q9H4M3 255 aa14.93□□□□□ -0.02
SSBP3-208ENST00000444533 RTN4Q9NQC3 1192 aaKnown RBP14.93□□□□□ -0.02
SSBP3-208ENST00000444533 COMMD8Q9NX08 183 aa14.93□□□□□ -0.02
SSBP3-208ENST00000444533 ZMYM5Q9UJ78 669 aa14.93□□□□□ -0.02
SSBP3-208ENST00000444533 CEP83Q9Y592 693 aa14.93□□□□□ -0.02
SSBP3-208ENST00000444533 THAP12O43422 761 aa14.92□□□□□ -0.02
SSBP3-208ENST00000444533 ACO1P21399 889 aaKnown RBP14.92□□□□□ -0.02
SSBP3-208ENST00000444533 SP100P23497 879 aaPredicted RBP14.92□□□□□ -0.02
SSBP3-208ENST00000444533 GABRR2P28476 465 aa14.92□□□□□ -0.02
SSBP3-208ENST00000444533 GNA15P30679 374 aa14.92□□□□□ -0.02
SSBP3-208ENST00000444533 GPR15P49685 360 aa14.92□□□□□ -0.02
SSBP3-208ENST00000444533 PDE6CP51160 858 aa14.92□□□□□ -0.02
SSBP3-208ENST00000444533 POLR2FP61218 127 aaKnown RBP14.92□□□□□ -0.02
SSBP3-208ENST00000444533 NTHL1P78549 312 aa14.92□□□□□ -0.02
SSBP3-208ENST00000444533 PLCB2Q00722 1185 aa14.92□□□□□ -0.02
SSBP3-208ENST00000444533 DRAP1Q14919 205 aaPredicted RBP14.92□□□□□ -0.02
SSBP3-208ENST00000444533 GOLGA7BQ2TAP0 167 aa14.92□□□□□ -0.02
SSBP3-208ENST00000444533 SDHAF4Q5VUM1 108 aa14.92□□□□□ -0.02
SSBP3-208ENST00000444533 UBR7Q8N806 425 aa14.92□□□□□ -0.02
SSBP3-208ENST00000444533 ANKRD52Q8NB46 1076 aa14.92□□□□□ -0.02
SSBP3-208ENST00000444533 ADAMTS19Q8TE59 1207 aa14.92□□□□□ -0.02
SSBP3-208ENST00000444533 SHC3Q92529 594 aa14.92□□□□□ -0.02
SSBP3-208ENST00000444533 MRPS31Q92665 395 aaKnown RBP14.92□□□□□ -0.02
SSBP3-208ENST00000444533 TRMT2BQ96GJ1 504 aaKnown RBP14.92□□□□□ -0.02
SSBP3-208ENST00000444533 DUSP16Q9BY84 665 aa14.92□□□□□ -0.02
SSBP3-208ENST00000444533 PNPLA8Q9NP80 782 aa14.92□□□□□ -0.02
SSBP3-208ENST00000444533 SIX2Q9NPC8 291 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms