RNA–Protein interactions for RNA: ENST00000444179.5

SHC1-208, Transcript of SHC adaptor protein 1, humanhuman

TSL 2

Gene SHC1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-208ENST00000444179 KIAA0895Q8NCT3 520 aa11.66□□□□□ -0.54
SHC1-208ENST00000444179 MRPS31Q92665 395 aaKnown RBP11.66□□□□□ -0.54
SHC1-208ENST00000444179 PAGE5Q96GU1 130 aa11.66□□□□□ -0.54
SHC1-208ENST00000444179 PCED1BQ96HM7 432 aa11.66□□□□□ -0.54
SHC1-208ENST00000444179 FUBP3Q96I24 572 aaKnown RBP eCLIP11.66□□□□□ -0.54
SHC1-208ENST00000444179 CGRRF1Q99675 332 aa11.66□□□□□ -0.54
SHC1-208ENST00000444179 HINFPQ9BQA5 517 aa11.66□□□□□ -0.54
SHC1-208ENST00000444179 IER2Q9BTL4 223 aa11.66□□□□□ -0.54
SHC1-208ENST00000444179 FAM126AQ9BYI3 521 aaPredicted RBP11.66□□□□□ -0.54
SHC1-208ENST00000444179 DPEP3Q9H4B8 488 aa11.66□□□□□ -0.54
SHC1-208ENST00000444179 MAGEF1Q9HAY2 307 aa11.66□□□□□ -0.54
SHC1-208ENST00000444179 PARD6AQ9NPB6 346 aa11.66□□□□□ -0.54
SHC1-208ENST00000444179 THG1LQ9NWX6 298 aaKnown RBP11.66□□□□□ -0.54
SHC1-208ENST00000444179 CDH9Q9ULB4 789 aa11.66□□□□□ -0.54
SHC1-208ENST00000444179 NCOR2Q9Y618 2525 aa11.65□□□□□ -0.54
SHC1-208ENST00000444179 UBE4BO95155 1302 aa11.65□□□□□ -0.54
SHC1-208ENST00000444179 TACC1O75410 805 aa11.65□□□□□ -0.54
SHC1-208ENST00000444179 PAPSS2O95340 614 aaPredicted RBP11.65□□□□□ -0.54
SHC1-208ENST00000444179 SLFN14P0C7P3 912 aa11.65□□□□□ -0.54
SHC1-208ENST00000444179 TNNI1P19237 187 aa11.65□□□□□ -0.54
SHC1-208ENST00000444179 GNL1P36915 607 aaPredicted RBP11.65□□□□□ -0.54
SHC1-208ENST00000444179 SNRPFP62306 86 aaKnown RBP11.65□□□□□ -0.54
SHC1-208ENST00000444179 RUNX3Q13761 415 aa11.65□□□□□ -0.54
SHC1-208ENST00000444179 LRRC32Q14392 662 aa11.65□□□□□ -0.54
SHC1-208ENST00000444179 ZNF77Q15935 545 aa11.65□□□□□ -0.54
SHC1-208ENST00000444179 LPAL2Q16609 132 aa11.65□□□□□ -0.54
SHC1-208ENST00000444179 KNOP1Q1ED39 458 aaKnown RBP11.65□□□□□ -0.54
SHC1-208ENST00000444179 WDR72Q3MJ13 1102 aa11.65□□□□□ -0.54
SHC1-208ENST00000444179 TMEM196Q5HYL7 178 aa11.65□□□□□ -0.54
SHC1-208ENST00000444179 MDH1BQ5I0G3 518 aa11.65□□□□□ -0.54
SHC1-208ENST00000444179 DGKKQ5KSL6 1271 aa11.65□□□□□ -0.54
SHC1-208ENST00000444179 ATL3Q6DD88 541 aa11.65□□□□□ -0.54
SHC1-208ENST00000444179 C1orf228Q6PIY5 440 aa11.65□□□□□ -0.54
SHC1-208ENST00000444179 ARL14EPQ8N8R7 260 aaPredicted RBP11.65□□□□□ -0.54
SHC1-208ENST00000444179 MYCBPAPQ8TBZ2 947 aa11.65□□□□□ -0.54
SHC1-208ENST00000444179 EZH1Q92800 747 aaPredicted RBP11.65□□□□□ -0.54
SHC1-208ENST00000444179 SPATA17Q96L03 361 aa11.65□□□□□ -0.54
SHC1-208ENST00000444179 MMS19Q96T76 1030 aa11.65□□□□□ -0.54
SHC1-208ENST00000444179 LINC00597Q9H2U6 94 aa11.65□□□□□ -0.54
SHC1-208ENST00000444179 TRPC7Q9HCX4 862 aa11.65□□□□□ -0.54
SHC1-208ENST00000444179 DMAC2Q9NW81 257 aa11.65□□□□□ -0.54
SHC1-208ENST00000444179 FAM13BQ9NYF5 915 aa11.65□□□□□ -0.54
SHC1-208ENST00000444179 MAGEC2Q9UBF1 373 aaPredicted RBP11.65□□□□□ -0.54
SHC1-208ENST00000444179 ZMYM5Q9UJ78 669 aa11.65□□□□□ -0.54
SHC1-208ENST00000444179 NUP210Q8TEM1 1887 aaPredicted RBP11.65□□□□□ -0.54
SHC1-208ENST00000444179 A0A1B0GVL5 298 aa11.64□□□□□ -0.55
SHC1-208ENST00000444179 LRRIQ3A6PVS8 624 aaPredicted RBP11.64□□□□□ -0.55
SHC1-208ENST00000444179 CLDN5O00501 218 aa11.64□□□□□ -0.55
SHC1-208ENST00000444179 TRDMT1O14717 391 aaKnown RBP11.64□□□□□ -0.55
SHC1-208ENST00000444179 VNN1O95497 513 aa11.64□□□□□ -0.55
SHC1-208ENST00000444179 STAU1O95793 577 aaKnown RBP11.64□□□□□ -0.55
SHC1-208ENST00000444179 EGFP01133 1207 aa11.64□□□□□ -0.55
SHC1-208ENST00000444179 PFKFB1P16118 471 aa11.64□□□□□ -0.55
SHC1-208ENST00000444179 PTPN1P18031 435 aaKnown RBP11.64□□□□□ -0.55
SHC1-208ENST00000444179 GALK1P51570 392 aa11.64□□□□□ -0.55
SHC1-208ENST00000444179 CDH8P55286 799 aa11.64□□□□□ -0.55
SHC1-208ENST00000444179 DLG4P78352 724 aa11.64□□□□□ -0.55
SHC1-208ENST00000444179 CLDN10P78369 228 aa11.64□□□□□ -0.55
SHC1-208ENST00000444179 CYP27A1Q02318 531 aa11.64□□□□□ -0.55
SHC1-208ENST00000444179 TDRD10Q5VZ19 366 aaKnown RBP11.64□□□□□ -0.55
SHC1-208ENST00000444179 VSTM1Q6UX27 236 aa11.64□□□□□ -0.55
SHC1-208ENST00000444179 C4orf50Q6ZRC1 276 aa11.64□□□□□ -0.55
SHC1-208ENST00000444179 HS2ST1Q7LGA3 356 aa11.64□□□□□ -0.55
SHC1-208ENST00000444179 B3GNT5Q9BYG0 378 aa11.64□□□□□ -0.55
SHC1-208ENST00000444179 RNF38Q9H0F5 515 aa11.64□□□□□ -0.55
SHC1-208ENST00000444179 SDCBP2Q9H190 292 aa11.64□□□□□ -0.55
SHC1-208ENST00000444179 KCTD10Q9H3F6 313 aa11.64□□□□□ -0.55
SHC1-208ENST00000444179 DLL3Q9NYJ7 618 aa11.64□□□□□ -0.55
SHC1-208ENST00000444179 NCDNQ9UBB6 729 aa11.64□□□□□ -0.55
SHC1-208ENST00000444179 UXTQ9UBK9 157 aaPredicted RBP11.64□□□□□ -0.55
SHC1-208ENST00000444179 CFAP45Q9UL16 551 aa11.64□□□□□ -0.55
SHC1-208ENST00000444179 HPSEQ9Y251 543 aa11.64□□□□□ -0.55
SHC1-208ENST00000444179 WNT6Q9Y6F9 365 aa11.64□□□□□ -0.55
SHC1-208ENST00000444179 TCHHQ07283 1943 aa11.64□□□□□ -0.55
SHC1-208ENST00000444179 KIF26AQ9ULI4 1882 aaPredicted RBP11.63□□□□□ -0.55
SHC1-208ENST00000444179 ANTXRLA6NF34 631 aa11.63□□□□□ -0.55
SHC1-208ENST00000444179 F8VP50 259 aa11.63□□□□□ -0.55
SHC1-208ENST00000444179 EXOC3O60645 756 aa11.63□□□□□ -0.55
SHC1-208ENST00000444179 C4BPAP04003 597 aaKnown RBP11.63□□□□□ -0.55
SHC1-208ENST00000444179 CKMP06732 381 aa11.63□□□□□ -0.55
SHC1-208ENST00000444179 HSP90AA1P07900 732 aaKnown RBP11.63□□□□□ -0.55
SHC1-208ENST00000444179 FAM163BP0C2L3 166 aa11.63□□□□□ -0.55
SHC1-208ENST00000444179 USP17L7P0C7H9 530 aa11.63□□□□□ -0.55
SHC1-208ENST00000444179 PDIA4P13667 645 aaKnown RBP11.63□□□□□ -0.55
SHC1-208ENST00000444179 CMA1P23946 247 aa11.63□□□□□ -0.55
SHC1-208ENST00000444179 GJA4P35212 333 aa11.63□□□□□ -0.55
SHC1-208ENST00000444179 GRIK1P39086 918 aa11.63□□□□□ -0.55
SHC1-208ENST00000444179 RAP1GAPP47736 663 aa11.63□□□□□ -0.55
SHC1-208ENST00000444179 PXNP49023 591 aaPredicted RBP11.63□□□□□ -0.55
SHC1-208ENST00000444179 NRLP54845 237 aa11.63□□□□□ -0.55
SHC1-208ENST00000444179 FAM160A1Q05DH4 1040 aa11.63□□□□□ -0.55
SHC1-208ENST00000444179 USP4Q13107 963 aa11.63□□□□□ -0.55
SHC1-208ENST00000444179 MTF1Q14872 753 aa11.63□□□□□ -0.55
SHC1-208ENST00000444179 EML3Q32P44 896 aa11.63□□□□□ -0.55
SHC1-208ENST00000444179 KMT5BQ4FZB7 885 aa11.63□□□□□ -0.55
SHC1-208ENST00000444179 C1orf220Q5T0J3 134 aa11.63□□□□□ -0.55
SHC1-208ENST00000444179 HEATR6Q6AI08 1181 aaKnown RBP11.63□□□□□ -0.55
SHC1-208ENST00000444179 PAQR9Q6ZVX9 377 aa11.63□□□□□ -0.55
SHC1-208ENST00000444179 SYNPOQ8N3V7 929 aa11.63□□□□□ -0.55
SHC1-208ENST00000444179 TTC16Q8NEE8 873 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms