RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 ALADP13716 330 aa11.5□□□□□ -0.57
HDAC6-211ENST00000443563 GABRR2P28476 465 aa11.5□□□□□ -0.57
HDAC6-211ENST00000443563 ZNF165P49910 485 aa11.5□□□□□ -0.57
HDAC6-211ENST00000443563 CDR1P51861 262 aa11.5□□□□□ -0.57
HDAC6-211ENST00000443563 MFAP3P55082 362 aa11.5□□□□□ -0.57
HDAC6-211ENST00000443563 SLC8A3P57103 927 aa11.5□□□□□ -0.57
HDAC6-211ENST00000443563 TPM4P67936 248 aa11.5□□□□□ -0.57
HDAC6-211ENST00000443563 CCDC142Q17RM4 750 aa11.5□□□□□ -0.57
HDAC6-211ENST00000443563 ZNF394Q53GI3 561 aa11.5□□□□□ -0.57
HDAC6-211ENST00000443563 TRIM65Q6PJ69 517 aa11.5□□□□□ -0.57
HDAC6-211ENST00000443563 DENND5BQ6ZUT9 1274 aa11.5□□□□□ -0.57
HDAC6-211ENST00000443563 HS6ST3Q8IZP7 471 aa11.5□□□□□ -0.57
HDAC6-211ENST00000443563 AOPEPQ8N6M6 819 aa11.5□□□□□ -0.57
HDAC6-211ENST00000443563 ITFG1Q8TB96 612 aa11.5□□□□□ -0.57
HDAC6-211ENST00000443563 SLC2A14Q8TDB8 520 aa11.5□□□□□ -0.57
HDAC6-211ENST00000443563 WHAMMQ8TF30 809 aa11.5□□□□□ -0.57
HDAC6-211ENST00000443563 CYFIP2Q96F07 1278 aa11.5□□□□□ -0.57
HDAC6-211ENST00000443563 MYRFLQ96LU7 910 aa11.5□□□□□ -0.57
HDAC6-211ENST00000443563 HEXIM2Q96MH2 286 aaKnown RBP11.5□□□□□ -0.57
HDAC6-211ENST00000443563 HNRNPABQ99729 332 aaKnown RBP11.5□□□□□ -0.57
HDAC6-211ENST00000443563 ARID3AQ99856 593 aa11.5□□□□□ -0.57
HDAC6-211ENST00000443563 LRRC3Q9BY71 257 aa11.5□□□□□ -0.57
HDAC6-211ENST00000443563 ZNF518BQ9C0D4 1074 aa11.5□□□□□ -0.57
HDAC6-211ENST00000443563 COMMD8Q9NX08 183 aa11.5□□□□□ -0.57
HDAC6-211ENST00000443563 APEX2Q9UBZ4 518 aa11.5□□□□□ -0.57
HDAC6-211ENST00000443563 HMGXB4Q9UGU5 601 aa11.5□□□□□ -0.57
HDAC6-211ENST00000443563 MAGED2Q9UNF1 606 aaPredicted RBP11.5□□□□□ -0.57
HDAC6-211ENST00000443563 PCDHB4Q9Y5E5 795 aa11.5□□□□□ -0.57
HDAC6-211ENST00000443563 DOCK8Q8NF50 2099 aa11.5□□□□□ -0.57
HDAC6-211ENST00000443563 PATJQ8NI35 1801 aa11.49□□□□□ -0.57
HDAC6-211ENST00000443563 OBSL1O75147 1896 aa11.49□□□□□ -0.57
HDAC6-211ENST00000443563 NUP210Q8TEM1 1887 aaPredicted RBP11.49□□□□□ -0.57
HDAC6-211ENST00000443563 A0A1W2PRU2 124 aa11.49□□□□□ -0.57
HDAC6-211ENST00000443563 SOBPA7XYQ1 873 aa11.49□□□□□ -0.57
HDAC6-211ENST00000443563 F8VP50 259 aa11.49□□□□□ -0.57
HDAC6-211ENST00000443563 CLDN5O00501 218 aa11.49□□□□□ -0.57
HDAC6-211ENST00000443563 RTN3O95197 1032 aaPredicted RBP11.49□□□□□ -0.57
HDAC6-211ENST00000443563 PAEPP09466 180 aa11.49□□□□□ -0.57
HDAC6-211ENST00000443563 CCDC130P13994 396 aa11.49□□□□□ -0.57
HDAC6-211ENST00000443563 CEBPBP17676 345 aa11.49□□□□□ -0.57
HDAC6-211ENST00000443563 DDX6P26196 483 aaKnown RBP eCLIP11.49□□□□□ -0.57
HDAC6-211ENST00000443563 PPP3CCP48454 512 aa11.49□□□□□ -0.57
HDAC6-211ENST00000443563 RAD23BP54727 409 aa11.49□□□□□ -0.57
HDAC6-211ENST00000443563 ORC1Q13415 861 aa11.49□□□□□ -0.57
HDAC6-211ENST00000443563 STILQ15468 1287 aa11.49□□□□□ -0.57
HDAC6-211ENST00000443563 SLC5A9Q2M3M2 681 aa11.49□□□□□ -0.57
HDAC6-211ENST00000443563 ZSCAN23Q3MJ62 389 aa11.49□□□□□ -0.57
HDAC6-211ENST00000443563 SGO2Q562F6 1265 aa11.49□□□□□ -0.57
HDAC6-211ENST00000443563 MIIPQ5JXC2 388 aa11.49□□□□□ -0.57
HDAC6-211ENST00000443563 FKBP15Q5T1M5 1219 aa11.49□□□□□ -0.57
HDAC6-211ENST00000443563 PHLDB3Q6NSJ2 640 aa11.49□□□□□ -0.57
HDAC6-211ENST00000443563 RRAGAQ7L523 313 aa11.49□□□□□ -0.57
HDAC6-211ENST00000443563 NPAS3Q8IXF0 933 aa11.49□□□□□ -0.57
HDAC6-211ENST00000443563 FUKQ8N0W3 1084 aa11.49□□□□□ -0.57
HDAC6-211ENST00000443563 NUP93Q8N1F7 819 aa11.49□□□□□ -0.57
HDAC6-211ENST00000443563 C12orf29Q8N999 325 aa11.49□□□□□ -0.57
HDAC6-211ENST00000443563 SLC4A11Q8NBS3 891 aa11.49□□□□□ -0.57
HDAC6-211ENST00000443563 GPR152Q8TDT2 470 aa11.49□□□□□ -0.57
HDAC6-211ENST00000443563 ING5Q8WYH8 240 aa11.49□□□□□ -0.57
HDAC6-211ENST00000443563 TCEAL4Q96EI5 215 aa11.49□□□□□ -0.57
HDAC6-211ENST00000443563 TWNKQ96RR1 684 aa11.49□□□□□ -0.57
HDAC6-211ENST00000443563 CRACR2AQ9BSW2 395 aa11.49□□□□□ -0.57
HDAC6-211ENST00000443563 FUCA2Q9BTY2 467 aa11.49□□□□□ -0.57
HDAC6-211ENST00000443563 ATXN3LQ9H3M9 355 aa11.49□□□□□ -0.57
HDAC6-211ENST00000443563 SLITRK6Q9H5Y7 841 aa11.49□□□□□ -0.57
HDAC6-211ENST00000443563 CSNK1G1Q9HCP0 422 aa11.49□□□□□ -0.57
HDAC6-211ENST00000443563 PNPLA8Q9NP80 782 aa11.49□□□□□ -0.57
HDAC6-211ENST00000443563 UBE2TQ9NPD8 197 aaPredicted RBP11.49□□□□□ -0.57
HDAC6-211ENST00000443563 CD320Q9NPF0 282 aa11.49□□□□□ -0.57
HDAC6-211ENST00000443563 FAM49BQ9NUQ9 324 aa11.49□□□□□ -0.57
HDAC6-211ENST00000443563 LIMD1Q9UGP4 676 aa11.49□□□□□ -0.57
HDAC6-211ENST00000443563 LIMA1Q9UHB6 759 aaKnown RBP11.49□□□□□ -0.57
HDAC6-211ENST00000443563 SORCS3Q9UPU3 1222 aa11.49□□□□□ -0.57
HDAC6-211ENST00000443563 ZNF638Q14966 1978 aaKnown RBP11.48□□□□□ -0.57
HDAC6-211ENST00000443563 DCXO43602 365 aa11.48□□□□□ -0.57
HDAC6-211ENST00000443563 VDRP11473 427 aa11.48□□□□□ -0.57
HDAC6-211ENST00000443563 HMGA1P17096 107 aaKnown RBP11.48□□□□□ -0.57
HDAC6-211ENST00000443563 SLC9A1P19634 815 aa11.48□□□□□ -0.57
HDAC6-211ENST00000443563 RFX1P22670 979 aa11.48□□□□□ -0.57
HDAC6-211ENST00000443563 PON1P27169 355 aa11.48□□□□□ -0.57
HDAC6-211ENST00000443563 ADORA2BP29275 332 aa11.48□□□□□ -0.57
HDAC6-211ENST00000443563 CCR2P41597 374 aa11.48□□□□□ -0.57
HDAC6-211ENST00000443563 GPR15P49685 360 aa11.48□□□□□ -0.57
HDAC6-211ENST00000443563 PDE6CP51160 858 aa11.48□□□□□ -0.57
HDAC6-211ENST00000443563 MTMR3Q13615 1198 aa11.48□□□□□ -0.57
HDAC6-211ENST00000443563 KRT31Q15323 416 aa11.48□□□□□ -0.57
HDAC6-211ENST00000443563 TEAD2Q15562 447 aa11.48□□□□□ -0.57
HDAC6-211ENST00000443563 NFKBIBQ15653 356 aa11.48□□□□□ -0.57
HDAC6-211ENST00000443563 PTPN21Q16825 1174 aa11.48□□□□□ -0.57
HDAC6-211ENST00000443563 SDHAF4Q5VUM1 108 aa11.48□□□□□ -0.57
HDAC6-211ENST00000443563 ARHGAP17Q68EM7 881 aa11.48□□□□□ -0.57
HDAC6-211ENST00000443563 TMEM270Q6UE05 265 aa11.48□□□□□ -0.57
HDAC6-211ENST00000443563 PAQR9Q6ZVX9 377 aa11.48□□□□□ -0.57
HDAC6-211ENST00000443563 ARHGEF19Q8IW93 802 aa11.48□□□□□ -0.57
HDAC6-211ENST00000443563 UBALD2Q8IYN6 164 aa11.48□□□□□ -0.57
HDAC6-211ENST00000443563 UBR7Q8N806 425 aa11.48□□□□□ -0.57
HDAC6-211ENST00000443563 PDZD8Q8NEN9 1154 aa11.48□□□□□ -0.57
HDAC6-211ENST00000443563 SHKBP1Q8TBC3 707 aa11.48□□□□□ -0.57
HDAC6-211ENST00000443563 OVCA2Q8WZ82 227 aa11.48□□□□□ -0.57
HDAC6-211ENST00000443563 MRPS31Q92665 395 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms