RNA–Protein interactions for RNA: ENST00000442721.1

TNXB-202, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-202ENST00000442721 KCNA1Q09470 495 aa12.77□□□□□ -0.37
TNXB-202ENST00000442721 GAB4Q2WGN9 574 aa12.77□□□□□ -0.37
TNXB-202ENST00000442721 LIMS2Q7Z4I7 341 aa12.77□□□□□ -0.37
TNXB-202ENST00000442721 C11orf74Q86VG3 221 aa12.77□□□□□ -0.37
TNXB-202ENST00000442721 RASSF3Q86WH2 238 aa12.77□□□□□ -0.37
TNXB-202ENST00000442721 KRI1Q8N9T8 703 aaKnown RBP12.77□□□□□ -0.37
TNXB-202ENST00000442721 SH3RF2Q8TEC5 729 aa12.77□□□□□ -0.37
TNXB-202ENST00000442721 USP33Q8TEY7 942 aa12.77□□□□□ -0.37
TNXB-202ENST00000442721 FUBP3Q96I24 572 aaKnown RBP eCLIP12.77□□□□□ -0.37
TNXB-202ENST00000442721 TMX3Q96JJ7 454 aa12.77□□□□□ -0.37
TNXB-202ENST00000442721 FAM213AQ9BRX8 229 aa12.77□□□□□ -0.37
TNXB-202ENST00000442721 LINC00597Q9H2U6 94 aa12.77□□□□□ -0.37
TNXB-202ENST00000442721 SEL1LQ9UBV2 794 aa12.77□□□□□ -0.37
TNXB-202ENST00000442721 ARHGAP26Q9UNA1 814 aa12.77□□□□□ -0.37
TNXB-202ENST00000442721 AGAP1Q9UPQ3 857 aa12.77□□□□□ -0.37
TNXB-202ENST00000442721 C2orf78A6NCI8 922 aa12.76□□□□□ -0.37
TNXB-202ENST00000442721 C4orf47A7E2U8 309 aa12.76□□□□□ -0.37
TNXB-202ENST00000442721 K7EQS6 105 aa12.76□□□□□ -0.37
TNXB-202ENST00000442721 HCRTO43612 131 aa12.76□□□□□ -0.37
TNXB-202ENST00000442721 CKMP06732 381 aa12.76□□□□□ -0.37
TNXB-202ENST00000442721 CHRM1P11229 460 aaPredicted RBP12.76□□□□□ -0.37
TNXB-202ENST00000442721 OPRD1P41143 372 aa12.76□□□□□ -0.37
TNXB-202ENST00000442721 MAGEA11P43364 429 aa12.76□□□□□ -0.37
TNXB-202ENST00000442721 DGKEP52429 567 aa12.76□□□□□ -0.37
TNXB-202ENST00000442721 ZXDBP98169 803 aa12.76□□□□□ -0.37
TNXB-202ENST00000442721 NR1H3Q13133 447 aa12.76□□□□□ -0.37
TNXB-202ENST00000442721 L1TD1Q5T7N2 865 aaKnown RBP12.76□□□□□ -0.37
TNXB-202ENST00000442721 DAB2IPQ5VWQ8 1189 aa12.76□□□□□ -0.37
TNXB-202ENST00000442721 FAM171BQ6P995 826 aa12.76□□□□□ -0.37
TNXB-202ENST00000442721 ADGRF2Q8IZF7 708 aa12.76□□□□□ -0.37
TNXB-202ENST00000442721 TOP6BLQ8N6T0 577 aa12.76□□□□□ -0.37
TNXB-202ENST00000442721 ARL14EPQ8N8R7 260 aaPredicted RBP12.76□□□□□ -0.37
TNXB-202ENST00000442721 FSIP1Q8NA03 581 aa12.76□□□□□ -0.37
TNXB-202ENST00000442721 TSTD1Q8NFU3 115 aa12.76□□□□□ -0.37
TNXB-202ENST00000442721 RASSF8Q8NHQ8 419 aa12.76□□□□□ -0.37
TNXB-202ENST00000442721 CCDC26Q8TAB7 109 aa12.76□□□□□ -0.37
TNXB-202ENST00000442721 DNAJC19Q96DA6 116 aa12.76□□□□□ -0.37
TNXB-202ENST00000442721 SAAL1Q96ER3 474 aa12.76□□□□□ -0.37
TNXB-202ENST00000442721 SIX4Q9UIU6 781 aa12.76□□□□□ -0.37
TNXB-202ENST00000442721 ITGA11Q9UKX5 1188 aa12.76□□□□□ -0.37
TNXB-202ENST00000442721 ASCC3Q8N3C0 2202 aaKnown RBP12.76□□□□□ -0.37
TNXB-202ENST00000442721 PKD1L2Q7Z442 2459 aa12.76□□□□□ -0.37
TNXB-202ENST00000442721 C1QTNF9BB2RNN3 333 aa12.75□□□□□ -0.37
TNXB-202ENST00000442721 CDX4O14627 284 aaPredicted RBP12.75□□□□□ -0.37
TNXB-202ENST00000442721 ZZEF1O43149 2961 aa12.75□□□□□ -0.37
TNXB-202ENST00000442721 CD2BP2O95400 341 aaKnown RBP12.75□□□□□ -0.37
TNXB-202ENST00000442721 NFATC1O95644 943 aa12.75□□□□□ -0.37
TNXB-202ENST00000442721 C1QTNF9P0C862 333 aa12.75□□□□□ -0.37
TNXB-202ENST00000442721 PFKLP17858 780 aa12.75□□□□□ -0.37
TNXB-202ENST00000442721 BCKDHBP21953 392 aa12.75□□□□□ -0.37
TNXB-202ENST00000442721 GARTP22102 1010 aa12.75□□□□□ -0.37
TNXB-202ENST00000442721 PCSK1P29120 753 aa12.75□□□□□ -0.37
TNXB-202ENST00000442721 LHX1P48742 406 aa12.75□□□□□ -0.37
TNXB-202ENST00000442721 ZNF252P-AS1Q0IIN9 211 aa12.75□□□□□ -0.37
TNXB-202ENST00000442721 PSMD2Q13200 908 aa12.75□□□□□ -0.37
TNXB-202ENST00000442721 KCNB1Q14721 858 aa12.75□□□□□ -0.37
TNXB-202ENST00000442721 RABEP1Q15276 862 aa12.75□□□□□ -0.37
TNXB-202ENST00000442721 SF3A1Q15459 793 aaKnown RBP12.75□□□□□ -0.37
TNXB-202ENST00000442721 SOWAHAQ2M3V2 549 aa12.75□□□□□ -0.37
TNXB-202ENST00000442721 USP39Q53GS9 565 aaKnown RBP12.75□□□□□ -0.37
TNXB-202ENST00000442721 SH3PXD2AQ5TCZ1 1133 aa12.75□□□□□ -0.37
TNXB-202ENST00000442721 UNQ6494/PRO21346Q6UXR6 183 aa12.75□□□□□ -0.37
TNXB-202ENST00000442721 USP49Q70CQ1 688 aa12.75□□□□□ -0.37
TNXB-202ENST00000442721 DYMQ7RTS9 669 aa12.75□□□□□ -0.37
TNXB-202ENST00000442721 SPATA2LQ8IUW3 424 aaPredicted RBP12.75□□□□□ -0.37
TNXB-202ENST00000442721 CSGALNACT2Q8N6G5 542 aa12.75□□□□□ -0.37
TNXB-202ENST00000442721 KIAA1958Q8N8K9 716 aa12.75□□□□□ -0.37
TNXB-202ENST00000442721 KDF1Q8NAX2 398 aaPredicted RBP12.75□□□□□ -0.37
TNXB-202ENST00000442721 OLIG1Q8TAK6 271 aa12.75□□□□□ -0.37
TNXB-202ENST00000442721 CACTINQ8WUQ7 758 aaKnown RBP12.75□□□□□ -0.37
TNXB-202ENST00000442721 FAM84AQ96KN4 292 aa12.75□□□□□ -0.37
TNXB-202ENST00000442721 SPATA17Q96L03 361 aa12.75□□□□□ -0.37
TNXB-202ENST00000442721 CNOT6LQ96LI5 555 aaKnown RBP12.75□□□□□ -0.37
TNXB-202ENST00000442721 CEP295NLQ96MC4 621 aa12.75□□□□□ -0.37
TNXB-202ENST00000442721 ACCSQ96QU6 501 aa12.75□□□□□ -0.37
TNXB-202ENST00000442721 TMEM121BQ9BXQ6 578 aaPredicted RBP12.75□□□□□ -0.37
TNXB-202ENST00000442721 TPSD1Q9BZJ3 242 aa12.75□□□□□ -0.37
TNXB-202ENST00000442721 RBAKQ9NYW8 714 aaPredicted RBP12.75□□□□□ -0.37
TNXB-202ENST00000442721 STK17AQ9UEE5 414 aa12.75□□□□□ -0.37
TNXB-202ENST00000442721 EXOC7Q9UPT5 735 aa12.75□□□□□ -0.37
TNXB-202ENST00000442721 SNX9Q9Y5X1 595 aa12.75□□□□□ -0.37
TNXB-202ENST00000442721 ASPMQ8IZT6 3477 aa12.75□□□□□ -0.37
TNXB-202ENST00000442721 IGF2RP11717 2491 aa12.74□□□□□ -0.37
TNXB-202ENST00000442721 PLXND1Q9Y4D7 1925 aa12.74□□□□□ -0.37
TNXB-202ENST00000442721 TNRC6BQ9UPQ9 1833 aaKnown RBP12.74□□□□□ -0.37
TNXB-202ENST00000442721 ANTXRLA6NF34 631 aa12.74□□□□□ -0.37
TNXB-202ENST00000442721 MYMKA6NI61 221 aa12.74□□□□□ -0.37
TNXB-202ENST00000442721 ATP2C2O75185 946 aa12.74□□□□□ -0.37
TNXB-202ENST00000442721 LDHAP00338 332 aaKnown RBP12.74□□□□□ -0.37
TNXB-202ENST00000442721 GAP43P17677 238 aa12.74□□□□□ -0.37
TNXB-202ENST00000442721 HDCP19113 662 aa12.74□□□□□ -0.37
TNXB-202ENST00000442721 CSRP1P21291 193 aaKnown RBP12.74□□□□□ -0.37
TNXB-202ENST00000442721 GBP1P32455 592 aa12.74□□□□□ -0.37
TNXB-202ENST00000442721 CASP5P51878 434 aa12.74□□□□□ -0.37
TNXB-202ENST00000442721 RBP5P82980 135 aa12.74□□□□□ -0.37
TNXB-202ENST00000442721 VSTM1Q6UX27 236 aa12.74□□□□□ -0.37
TNXB-202ENST00000442721 C4orf50Q6ZRC1 276 aa12.74□□□□□ -0.37
TNXB-202ENST00000442721 DPH6Q7L8W6 267 aa12.74□□□□□ -0.37
TNXB-202ENST00000442721 BRAPQ7Z569 592 aa12.74□□□□□ -0.37
TNXB-202ENST00000442721 SCN4BQ8IWT1 228 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms