RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 SHOC2Q9UQ13 582 aa21.23■□□□□ 0.99
SHOX2-203ENST00000441443 COQ4Q9Y3A0 265 aa21.23■□□□□ 0.99
SHOX2-203ENST00000441443 SIPA1L1O43166 1804 aa21.23■□□□□ 0.99
SHOX2-203ENST00000441443 IPO5O00410 1097 aaKnown RBP21.23■□□□□ 0.99
SHOX2-203ENST00000441443 TGDSO95455 350 aa21.23■□□□□ 0.99
SHOX2-203ENST00000441443 INHBCP55103 352 aa21.23■□□□□ 0.99
SHOX2-203ENST00000441443 HSF5Q4G112 596 aaPredicted RBP21.23■□□□□ 0.99
SHOX2-203ENST00000441443 RASSF3Q86WH2 238 aa21.23■□□□□ 0.99
SHOX2-203ENST00000441443 MTBPQ96DY7 904 aa21.23■□□□□ 0.99
SHOX2-203ENST00000441443 TEKT3Q9BXF9 490 aa21.23■□□□□ 0.99
SHOX2-203ENST00000441443 PPCSQ9HAB8 311 aa21.23■□□□□ 0.99
SHOX2-203ENST00000441443 HERC5Q9UII4 1024 aaKnown RBP21.23■□□□□ 0.99
SHOX2-203ENST00000441443 SLC4A7Q9Y6M7 1214 aa21.23■□□□□ 0.99
SHOX2-203ENST00000441443 IVNS1ABPQ9Y6Y0 642 aa21.23■□□□□ 0.99
SHOX2-203ENST00000441443 COMMD3-BMI1R4GMX3 469 aa21.23■□□□□ 0.99
SHOX2-203ENST00000441443 PMM2O15305 246 aa21.23■□□□□ 0.99
SHOX2-203ENST00000441443 TM7SF2O76062 418 aa21.23■□□□□ 0.99
SHOX2-203ENST00000441443 YY1P25490 414 aa21.23■□□□□ 0.99
SHOX2-203ENST00000441443 ETV4P43268 484 aa21.23■□□□□ 0.99
SHOX2-203ENST00000441443 DYNLT1P63172 113 aa21.23■□□□□ 0.99
SHOX2-203ENST00000441443 TRMT5Q32P41 509 aaKnown RBP21.23■□□□□ 0.99
SHOX2-203ENST00000441443 LIN9Q5TKA1 542 aa21.23■□□□□ 0.99
SHOX2-203ENST00000441443 SMC1BQ8NDV3 1235 aa21.23■□□□□ 0.99
SHOX2-203ENST00000441443 PYDC1Q8WXC3 89 aa21.23■□□□□ 0.99
SHOX2-203ENST00000441443 WDR11Q9BZH6 1224 aa21.23■□□□□ 0.99
SHOX2-203ENST00000441443 CHCHD3Q9NX63 227 aaKnown RBP21.23■□□□□ 0.99
SHOX2-203ENST00000441443 PLA2G4CQ9UP65 541 aa21.23■□□□□ 0.99
SHOX2-203ENST00000441443 TMX2Q9Y320 296 aa21.23■□□□□ 0.99
SHOX2-203ENST00000441443 MEI4A8MW99 385 aa21.22■□□□□ 0.99
SHOX2-203ENST00000441443 HMGB2P26583 209 aaKnown RBP21.22■□□□□ 0.99
SHOX2-203ENST00000441443 FKBP1AP62942 108 aaKnown RBP21.22■□□□□ 0.99
SHOX2-203ENST00000441443 SATL1Q86VE3 508 aa21.22■□□□□ 0.99
SHOX2-203ENST00000441443 GSTCDQ8NEC7 633 aa21.22■□□□□ 0.99
SHOX2-203ENST00000441443 TRIM11Q96F44 468 aa21.22■□□□□ 0.99
SHOX2-203ENST00000441443 CLIC5Q9NZA1 410 aa21.22■□□□□ 0.99
SHOX2-203ENST00000441443 hCG_2014768A0A024R1R8 64 aa21.22■□□□□ 0.99
SHOX2-203ENST00000441443 TCRBV7S3A2A0A539 114 aa21.22■□□□□ 0.99
SHOX2-203ENST00000441443 CAPN14A8MX76 684 aa21.22■□□□□ 0.99
SHOX2-203ENST00000441443 VCPP55072 806 aaKnown RBP21.22■□□□□ 0.99
SHOX2-203ENST00000441443 GTF2BQ00403 316 aa21.22■□□□□ 0.99
SHOX2-203ENST00000441443 LPCAT4Q643R3 524 aa21.22■□□□□ 0.99
SHOX2-203ENST00000441443 PRPF39Q86UA1 669 aaKnown RBP21.22■□□□□ 0.99
SHOX2-203ENST00000441443 SPATA24Q86W54 205 aa21.22■□□□□ 0.99
SHOX2-203ENST00000441443 LDHDQ86WU2 507 aa21.22■□□□□ 0.99
SHOX2-203ENST00000441443 ARID3BQ8IVW6 561 aaPredicted RBP21.22■□□□□ 0.99
SHOX2-203ENST00000441443 TTLL6Q8N841 843 aa21.22■□□□□ 0.99
SHOX2-203ENST00000441443 NAT14Q8WUY8 206 aa21.22■□□□□ 0.99
SHOX2-203ENST00000441443 DHRS4Q9BTZ2 278 aa21.22■□□□□ 0.99
SHOX2-203ENST00000441443 PCDHB2Q9Y5E7 798 aa21.22■□□□□ 0.99
SHOX2-203ENST00000441443 ALDH18A1P54886 795 aaKnown RBP21.21■□□□□ 0.99
SHOX2-203ENST00000441443 GDF10P55107 478 aa21.21■□□□□ 0.99
SHOX2-203ENST00000441443 OASLQ15646 514 aaKnown RBP21.21■□□□□ 0.99
SHOX2-203ENST00000441443 ISLR2Q6UXK2 745 aa21.21■□□□□ 0.99
SHOX2-203ENST00000441443 ALKBH8Q96BT7 664 aaKnown RBP21.21■□□□□ 0.99
SHOX2-203ENST00000441443 HIC2Q96JB3 615 aa21.21■□□□□ 0.99
SHOX2-203ENST00000441443 CCDC195A0A1B0GUA6 201 aa21.21■□□□□ 0.99
SHOX2-203ENST00000441443 BUD23O43709 281 aaKnown RBP21.21■□□□□ 0.99
SHOX2-203ENST00000441443 DHRS4L1P0CG22 281 aa21.21■□□□□ 0.99
SHOX2-203ENST00000441443 FAAP100Q0VG06 881 aa21.21■□□□□ 0.99
SHOX2-203ENST00000441443 PTK7Q13308 1070 aa21.21■□□□□ 0.99
SHOX2-203ENST00000441443 KLHL38Q2WGJ6 581 aa21.21■□□□□ 0.99
SHOX2-203ENST00000441443 SFT2D3Q587I9 215 aa21.21■□□□□ 0.99
SHOX2-203ENST00000441443 SYCP2LQ5T4T6 812 aa21.21■□□□□ 0.99
SHOX2-203ENST00000441443 SPOPLQ6IQ16 392 aa21.21■□□□□ 0.99
SHOX2-203ENST00000441443 CHURC1Q8WUH1 139 aa21.21■□□□□ 0.99
SHOX2-203ENST00000441443 ZNF341Q9BYN7 854 aa21.21■□□□□ 0.99
SHOX2-203ENST00000441443 ZHX2Q9Y6X8 837 aa21.21■□□□□ 0.99
SHOX2-203ENST00000441443 SPECC1L-ADORA2AF8WAN1 911 aa21.21■□□□□ 0.99
SHOX2-203ENST00000441443 USP46P62068 366 aa21.21■□□□□ 0.99
SHOX2-203ENST00000441443 MYBPC3Q14896 1274 aa21.21■□□□□ 0.99
SHOX2-203ENST00000441443 MIER3Q7Z3K6 550 aa21.21■□□□□ 0.99
SHOX2-203ENST00000441443 RCOR2Q8IZ40 523 aa21.21■□□□□ 0.99
SHOX2-203ENST00000441443 OR6Y1Q8NGX8 325 aa21.21■□□□□ 0.99
SHOX2-203ENST00000441443 FAM151AQ8WW52 585 aa21.21■□□□□ 0.99
SHOX2-203ENST00000441443 CPT1BQ92523 772 aa21.21■□□□□ 0.99
SHOX2-203ENST00000441443 OLFM3Q96PB7 478 aa21.21■□□□□ 0.99
SHOX2-203ENST00000441443 CHMP2BQ9UQN3 213 aa21.21■□□□□ 0.99
SHOX2-203ENST00000441443 RARRES1P49788 294 aa21.2■□□□□ 0.98
SHOX2-203ENST00000441443 CDHR3Q6ZTQ4 885 aa21.2■□□□□ 0.98
SHOX2-203ENST00000441443 SDCCAG8Q86SQ7 713 aaPredicted RBP21.2■□□□□ 0.98
SHOX2-203ENST00000441443 CCPG1Q9ULG6 757 aa21.2■□□□□ 0.98
SHOX2-203ENST00000441443 QSER1Q2KHR3 1735 aa21.2■□□□□ 0.98
SHOX2-203ENST00000441443 F8VP50 259 aa21.2■□□□□ 0.98
SHOX2-203ENST00000441443 HNRNPRO43390 633 aaKnown RBP21.2■□□□□ 0.98
SHOX2-203ENST00000441443 STK10O94804 968 aaKnown RBP21.2■□□□□ 0.98
SHOX2-203ENST00000441443 DEUP1Q05D60 604 aa21.2■□□□□ 0.98
SHOX2-203ENST00000441443 SPOCD1Q6ZMY3 1216 aa21.2■□□□□ 0.98
SHOX2-203ENST00000441443 CHSY1Q86X52 802 aa21.2■□□□□ 0.98
SHOX2-203ENST00000441443 KLHL23Q8NBE8 558 aa21.2■□□□□ 0.98
SHOX2-203ENST00000441443 SMYD3Q9H7B4 428 aa21.2■□□□□ 0.98
SHOX2-203ENST00000441443 PCDH9Q9HC56 1237 aa21.2■□□□□ 0.98
SHOX2-203ENST00000441443 MRPL47Q9HD33 250 aaKnown RBP21.2■□□□□ 0.98
SHOX2-203ENST00000441443 C1orf112Q9NSG2 853 aa21.2■□□□□ 0.98
SHOX2-203ENST00000441443 STRIP2Q9ULQ0 834 aa21.2■□□□□ 0.98
SHOX2-203ENST00000441443 FARP1Q9Y4F1 1045 aaPredicted RBP21.2■□□□□ 0.98
SHOX2-203ENST00000441443 VAV1P15498 845 aa21.19■□□□□ 0.98
SHOX2-203ENST00000441443 MED21Q13503 144 aa21.19■□□□□ 0.98
SHOX2-203ENST00000441443 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.19■□□□□ 0.98
SHOX2-203ENST00000441443 ZNF772Q68DY9 489 aaPredicted RBP21.19■□□□□ 0.98
SHOX2-203ENST00000441443 ACAD11Q709F0 780 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms