RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 RBM44Q6ZP01 1051 aaKnown RBP12.22□□□□□ -0.45
SMPD4-209ENST00000439886 TMPRSS6Q8IU80 811 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 CRLF3Q8IUI8 442 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 SLC15A3Q8IY34 581 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 FAM71AQ8IYT1 594 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 GDPD5Q8WTR4 605 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 SENP7Q9BQF6 1050 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 CALN1Q9BXU9 219 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 ANLNQ9NQW6 1124 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 SNED1Q8TER0 1413 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 ROBO3Q96MS0 1386 aa12.22□□□□□ -0.45
SMPD4-209ENST00000439886 TRIM49D1C9J1S8 452 aa12.21□□□□□ -0.45
SMPD4-209ENST00000439886 PDLIM1O00151 329 aa12.21□□□□□ -0.45
SMPD4-209ENST00000439886 HNRNPDLO14979 420 aaKnown RBP12.21□□□□□ -0.45
SMPD4-209ENST00000439886 FOSP01100 380 aaPredicted RBP12.21□□□□□ -0.45
SMPD4-209ENST00000439886 FDX1P10109 184 aa12.21□□□□□ -0.45
SMPD4-209ENST00000439886 GLRA2P23416 452 aa12.21□□□□□ -0.45
SMPD4-209ENST00000439886 MSX2P35548 267 aaPredicted RBP12.21□□□□□ -0.45
SMPD4-209ENST00000439886 SLC1A1P43005 524 aa12.21□□□□□ -0.45
SMPD4-209ENST00000439886 CDK7P50613 346 aa12.21□□□□□ -0.45
SMPD4-209ENST00000439886 ZNF200P98182 395 aaPredicted RBP12.21□□□□□ -0.45
SMPD4-209ENST00000439886 ANKRD22Q5VYY1 191 aa12.21□□□□□ -0.45
SMPD4-209ENST00000439886 NLRX1Q86UT6 975 aa12.21□□□□□ -0.45
SMPD4-209ENST00000439886 TREML1Q86YW5 311 aa12.21□□□□□ -0.45
SMPD4-209ENST00000439886 PEX5LQ8IYB4 626 aa12.21□□□□□ -0.45
SMPD4-209ENST00000439886 C12orf50Q8NA57 414 aaPredicted RBP12.21□□□□□ -0.45
SMPD4-209ENST00000439886 ICA1LQ8NDH6 482 aa12.21□□□□□ -0.45
SMPD4-209ENST00000439886 PLEKHO2Q8TD55 490 aa12.21□□□□□ -0.45
SMPD4-209ENST00000439886 LRRN4Q8WUT4 740 aa12.21□□□□□ -0.45
SMPD4-209ENST00000439886 PANX3Q96QZ0 392 aa12.21□□□□□ -0.45
SMPD4-209ENST00000439886 SLC7A5P2Q9GIP4 190 aa12.21□□□□□ -0.45
SMPD4-209ENST00000439886 KANSL3Q9P2N6 904 aa12.21□□□□□ -0.45
SMPD4-209ENST00000439886 WRAP73Q9P2S5 460 aaPredicted RBP12.21□□□□□ -0.45
SMPD4-209ENST00000439886 IQANK1A0A1B0GTG1 560 aa12.21□□□□□ -0.45
SMPD4-209ENST00000439886 CFHP08603 1231 aa12.21□□□□□ -0.45
SMPD4-209ENST00000439886 C6orf222P0C671 652 aaPredicted RBP12.21□□□□□ -0.45
SMPD4-209ENST00000439886 RFX1P22670 979 aa12.21□□□□□ -0.45
SMPD4-209ENST00000439886 AQP4P55087 323 aa12.21□□□□□ -0.45
SMPD4-209ENST00000439886 RPL7AP62424 266 aaKnown RBP12.21□□□□□ -0.45
SMPD4-209ENST00000439886 CLEC16AQ2KHT3 1053 aa12.21□□□□□ -0.45
SMPD4-209ENST00000439886 C6orf183Q5T699 404 aa12.21□□□□□ -0.45
SMPD4-209ENST00000439886 ZFPM1Q8IX07 1006 aa12.21□□□□□ -0.45
SMPD4-209ENST00000439886 CPXCR1Q8N123 301 aa12.21□□□□□ -0.45
SMPD4-209ENST00000439886 OR6Y1Q8NGX8 325 aa12.21□□□□□ -0.45
SMPD4-209ENST00000439886 LMO3Q8TAP4 145 aa12.21□□□□□ -0.45
SMPD4-209ENST00000439886 NAT14Q8WUY8 206 aa12.21□□□□□ -0.45
SMPD4-209ENST00000439886 ATP6V0A1Q93050 837 aa12.21□□□□□ -0.45
SMPD4-209ENST00000439886 SRPK1Q96SB4 655 aaKnown RBP12.21□□□□□ -0.45
SMPD4-209ENST00000439886 NDEL1Q9GZM8 345 aa12.21□□□□□ -0.45
SMPD4-209ENST00000439886 TMEM206Q9H813 350 aa12.21□□□□□ -0.45
SMPD4-209ENST00000439886 SLC7A8Q9UHI5 535 aa12.21□□□□□ -0.45
SMPD4-209ENST00000439886 XPO7Q9UIA9 1087 aaKnown RBP12.21□□□□□ -0.45
SMPD4-209ENST00000439886 CROTQ9UKG9 612 aa12.21□□□□□ -0.45
SMPD4-209ENST00000439886 MYH11P35749 1972 aa12.21□□□□□ -0.46
SMPD4-209ENST00000439886 H0YIN7 160 aa12.21□□□□□ -0.46
SMPD4-209ENST00000439886 SORBS2O94875 1100 aaKnown RBP12.21□□□□□ -0.46
SMPD4-209ENST00000439886 PEX2P28328 305 aa12.21□□□□□ -0.46
SMPD4-209ENST00000439886 GCAP28676 217 aa12.21□□□□□ -0.46
SMPD4-209ENST00000439886 TRPC1P48995 793 aa12.21□□□□□ -0.46
SMPD4-209ENST00000439886 RALGPS1Q5JS13 557 aa12.21□□□□□ -0.46
SMPD4-209ENST00000439886 PLA2G4FQ68DD2 849 aa12.21□□□□□ -0.46
SMPD4-209ENST00000439886 DENND5BQ6ZUT9 1274 aa12.21□□□□□ -0.46
SMPD4-209ENST00000439886 SAMD3Q8N6K7 520 aa12.21□□□□□ -0.46
SMPD4-209ENST00000439886 MCEEQ96PE7 176 aa12.21□□□□□ -0.46
SMPD4-209ENST00000439886 TEKT3Q9BXF9 490 aa12.21□□□□□ -0.46
SMPD4-209ENST00000439886 DRC3Q9H069 523 aa12.21□□□□□ -0.46
SMPD4-209ENST00000439886 IVNS1ABPQ9Y6Y0 642 aa12.21□□□□□ -0.46
SMPD4-209ENST00000439886 NUP98P52948 1817 aa12.2□□□□□ -0.46
SMPD4-209ENST00000439886 DCAF8L1A6NGE4 600 aa12.2□□□□□ -0.46
SMPD4-209ENST00000439886 ADCY3O60266 1144 aa12.2□□□□□ -0.46
SMPD4-209ENST00000439886 PROSCO94903 275 aa12.2□□□□□ -0.46
SMPD4-209ENST00000439886 MYCLP12524 364 aaPredicted RBP12.2□□□□□ -0.46
SMPD4-209ENST00000439886 NEK2P51955 445 aa12.2□□□□□ -0.46
SMPD4-209ENST00000439886 NSUN2Q08J23 767 aaKnown RBP eCLIP12.2□□□□□ -0.46
SMPD4-209ENST00000439886 DLG1Q12959 904 aa12.2□□□□□ -0.46
SMPD4-209ENST00000439886 OTOP1Q7RTM1 612 aa12.2□□□□□ -0.46
SMPD4-209ENST00000439886 ANKS1BQ7Z6G8 1248 aa12.2□□□□□ -0.46
SMPD4-209ENST00000439886 RFX6Q8HWS3 928 aa12.2□□□□□ -0.46
SMPD4-209ENST00000439886 FAM71DQ8N9W8 422 aa12.2□□□□□ -0.46
SMPD4-209ENST00000439886 MIS12Q9H081 205 aa12.2□□□□□ -0.46
SMPD4-209ENST00000439886 TDRKHQ9Y2W6 561 aaKnown RBP12.2□□□□□ -0.46
SMPD4-209ENST00000439886 MROH7Q68CQ1 1323 aa12.2□□□□□ -0.46
SMPD4-209ENST00000439886 F8VP50 259 aa12.2□□□□□ -0.46
SMPD4-209ENST00000439886 ECE2O60344 883 aa12.2□□□□□ -0.46
SMPD4-209ENST00000439886 CYP3A4P08684 503 aa12.2□□□□□ -0.46
SMPD4-209ENST00000439886 CCDC166P0CW27 439 aa12.2□□□□□ -0.46
SMPD4-209ENST00000439886 NELFEP18615 380 aaKnown RBP12.2□□□□□ -0.46
SMPD4-209ENST00000439886 KLHL38Q2WGJ6 581 aa12.2□□□□□ -0.46
SMPD4-209ENST00000439886 PPP6R3Q5H9R7 873 aaPredicted RBP12.2□□□□□ -0.46
SMPD4-209ENST00000439886 FNBP1LQ5T0N5 605 aa12.2□□□□□ -0.46
SMPD4-209ENST00000439886 CLEC4GQ6UXB4 293 aa12.2□□□□□ -0.46
SMPD4-209ENST00000439886 SEPT12Q8IYM1 358 aa12.2□□□□□ -0.46
SMPD4-209ENST00000439886 RNF148Q8N7C7 305 aa12.2□□□□□ -0.46
SMPD4-209ENST00000439886 LINC00116Q8NCU8 138 aa12.2□□□□□ -0.46
SMPD4-209ENST00000439886 E2F7Q96AV8 911 aa12.2□□□□□ -0.46
SMPD4-209ENST00000439886 WDR18Q9BV38 432 aa12.2□□□□□ -0.46
SMPD4-209ENST00000439886 VAV3Q9UKW4 847 aa12.2□□□□□ -0.46
SMPD4-209ENST00000439886 E5RJQ4 531 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 MAGEB2O15479 319 aa12.19□□□□□ -0.46
SMPD4-209ENST00000439886 AVILO75366 819 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms