RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 ADAM12O43184 909 aa13.42□□□□□ -0.26
SCLT1-202ENST00000439369 RTN2O75298 545 aa13.42□□□□□ -0.26
SCLT1-202ENST00000439369 NDUFA10O95299 355 aa13.42□□□□□ -0.26
SCLT1-202ENST00000439369 PLEKP08567 350 aaPredicted RBP13.42□□□□□ -0.26
SCLT1-202ENST00000439369 FAM228BP0C875 321 aa13.42□□□□□ -0.26
SCLT1-202ENST00000439369 GPD2P43304 727 aa13.42□□□□□ -0.26
SCLT1-202ENST00000439369 TUFMP49411 452 aaKnown RBP13.42□□□□□ -0.26
SCLT1-202ENST00000439369 RPL10AP62906 217 aaKnown RBP13.42□□□□□ -0.26
SCLT1-202ENST00000439369 NOMO3P69849 1222 aa13.42□□□□□ -0.26
SCLT1-202ENST00000439369 CENPCQ03188 943 aa13.42□□□□□ -0.26
SCLT1-202ENST00000439369 TAF3Q5VWG9 929 aa13.42□□□□□ -0.26
SCLT1-202ENST00000439369 DENND1BQ6P3S1 775 aa13.42□□□□□ -0.26
SCLT1-202ENST00000439369 ELMSAN1Q6PJG2 1045 aa13.42□□□□□ -0.26
SCLT1-202ENST00000439369 TTC30AQ86WT1 665 aa13.42□□□□□ -0.26
SCLT1-202ENST00000439369 TCEAL8Q8IYN2 117 aa13.42□□□□□ -0.26
SCLT1-202ENST00000439369 TXLNBQ8N3L3 684 aa13.42□□□□□ -0.26
SCLT1-202ENST00000439369 MICAL1Q8TDZ2 1067 aa13.42□□□□□ -0.26
SCLT1-202ENST00000439369 HDAC7Q8WUI4 952 aa13.42□□□□□ -0.26
SCLT1-202ENST00000439369 SLC35F5Q8WV83 523 aa13.42□□□□□ -0.26
SCLT1-202ENST00000439369 PPP2R3CQ969Q6 453 aa13.42□□□□□ -0.26
SCLT1-202ENST00000439369 TRIM11Q96F44 468 aa13.42□□□□□ -0.26
SCLT1-202ENST00000439369 VCPIP1Q96JH7 1222 aa13.42□□□□□ -0.26
SCLT1-202ENST00000439369 C8orf48Q96LL4 319 aa13.42□□□□□ -0.26
SCLT1-202ENST00000439369 CDCA3Q99618 268 aaPredicted RBP13.42□□□□□ -0.26
SCLT1-202ENST00000439369 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.42□□□□□ -0.26
SCLT1-202ENST00000439369 KRT82Q9NSB4 513 aa13.42□□□□□ -0.26
SCLT1-202ENST00000439369 DPP7Q9UHL4 492 aa13.42□□□□□ -0.26
SCLT1-202ENST00000439369 NAGPAQ9UK23 515 aa13.42□□□□□ -0.26
SCLT1-202ENST00000439369 SOWAHDA6NJG2 315 aa13.41□□□□□ -0.26
SCLT1-202ENST00000439369 TRIM66O15016 1216 aa13.41□□□□□ -0.26
SCLT1-202ENST00000439369 AP1G2O75843 785 aa13.41□□□□□ -0.26
SCLT1-202ENST00000439369 CALCAP01258 141 aa13.41□□□□□ -0.26
SCLT1-202ENST00000439369 OR4Q2P0C623 313 aa13.41□□□□□ -0.26
SCLT1-202ENST00000439369 HAPLN1P10915 354 aaPredicted RBP13.41□□□□□ -0.26
SCLT1-202ENST00000439369 UNGP13051 313 aaPredicted RBP13.41□□□□□ -0.26
SCLT1-202ENST00000439369 RPL17P18621 184 aaKnown RBP13.41□□□□□ -0.26
SCLT1-202ENST00000439369 ADORA2BP29275 332 aa13.41□□□□□ -0.26
SCLT1-202ENST00000439369 ACADSBP45954 432 aa13.41□□□□□ -0.26
SCLT1-202ENST00000439369 NSFP46459 744 aaKnown RBP13.41□□□□□ -0.26
SCLT1-202ENST00000439369 PLA2G4AP47712 749 aa13.41□□□□□ -0.26
SCLT1-202ENST00000439369 RPL34P49207 117 aaKnown RBP13.41□□□□□ -0.26
SCLT1-202ENST00000439369 ARPP19P56211 112 aa13.41□□□□□ -0.26
SCLT1-202ENST00000439369 KRT83P78385 493 aa13.41□□□□□ -0.26
SCLT1-202ENST00000439369 C1QBPQ07021 282 aaKnown RBP13.41□□□□□ -0.26
SCLT1-202ENST00000439369 SPA17Q15506 151 aa13.41□□□□□ -0.26
SCLT1-202ENST00000439369 PLPP4Q5VZY2 271 aa13.41□□□□□ -0.26
SCLT1-202ENST00000439369 ACAD10Q6JQN1 1059 aa13.41□□□□□ -0.26
SCLT1-202ENST00000439369 GPR153Q6NV75 609 aa13.41□□□□□ -0.26
SCLT1-202ENST00000439369 ALKBH5Q6P6C2 394 aaKnown RBP13.41□□□□□ -0.26
SCLT1-202ENST00000439369 LILRA6Q6PI73 481 aa13.41□□□□□ -0.26
SCLT1-202ENST00000439369 RNF19BQ6ZMZ0 732 aa13.41□□□□□ -0.26
SCLT1-202ENST00000439369 PHF13Q86YI8 300 aaPredicted RBP13.41□□□□□ -0.26
SCLT1-202ENST00000439369 AUTS2Q8WXX7 1259 aa13.41□□□□□ -0.26
SCLT1-202ENST00000439369 KCTD13Q8WZ19 329 aa13.41□□□□□ -0.26
SCLT1-202ENST00000439369 SPATA17Q96L03 361 aa13.41□□□□□ -0.26
SCLT1-202ENST00000439369 HSFY1Q96LI6 401 aa13.41□□□□□ -0.26
SCLT1-202ENST00000439369 PCDHB18PQ96TA0 734 aa13.41□□□□□ -0.26
SCLT1-202ENST00000439369 LPIN3Q9BQK8 851 aa13.41□□□□□ -0.26
SCLT1-202ENST00000439369 ISCUQ9H1K1 167 aa13.41□□□□□ -0.26
SCLT1-202ENST00000439369 SEPT11Q9NVA2 429 aaKnown RBP13.41□□□□□ -0.26
SCLT1-202ENST00000439369 COMMD8Q9NX08 183 aa13.41□□□□□ -0.26
SCLT1-202ENST00000439369 ABI2Q9NYB9 513 aaPredicted RBP13.41□□□□□ -0.26
SCLT1-202ENST00000439369 INTUQ9ULD6 942 aa13.41□□□□□ -0.26
SCLT1-202ENST00000439369 HIDE1A8MVS5 230 aa13.4□□□□□ -0.26
SCLT1-202ENST00000439369 CLDN5O00501 218 aa13.4□□□□□ -0.26
SCLT1-202ENST00000439369 VNN2O95498 520 aa13.4□□□□□ -0.26
SCLT1-202ENST00000439369 GLUD1P00367 558 aa13.4□□□□□ -0.26
SCLT1-202ENST00000439369 MYBL1P10243 752 aa13.4□□□□□ -0.26
SCLT1-202ENST00000439369 POU3F3P20264 500 aaPredicted RBP13.4□□□□□ -0.26
SCLT1-202ENST00000439369 MMP8P22894 467 aa13.4□□□□□ -0.26
SCLT1-202ENST00000439369 BDNFP23560 247 aa13.4□□□□□ -0.26
SCLT1-202ENST00000439369 KLRC2P26717 231 aa13.4□□□□□ -0.26
SCLT1-202ENST00000439369 ELF1P32519 619 aa13.4□□□□□ -0.26
SCLT1-202ENST00000439369 CA8P35219 290 aa13.4□□□□□ -0.26
SCLT1-202ENST00000439369 PDE4CQ08493 712 aa13.4□□□□□ -0.26
SCLT1-202ENST00000439369 PDCLQ13371 301 aa13.4□□□□□ -0.26
SCLT1-202ENST00000439369 PLD1Q13393 1074 aa13.4□□□□□ -0.26
SCLT1-202ENST00000439369 CCDC142Q17RM4 750 aa13.4□□□□□ -0.26
SCLT1-202ENST00000439369 NAA35Q5VZE5 725 aa13.4□□□□□ -0.26
SCLT1-202ENST00000439369 RAD9BQ6WBX8 426 aa13.4□□□□□ -0.26
SCLT1-202ENST00000439369 CLEC20AQ6ZU45 233 aa13.4□□□□□ -0.26
SCLT1-202ENST00000439369 CCDC149Q6ZUS6 474 aa13.4□□□□□ -0.26
SCLT1-202ENST00000439369 GPIHBP1Q8IV16 184 aa13.4□□□□□ -0.26
SCLT1-202ENST00000439369 WDTC1Q8N5D0 677 aa13.4□□□□□ -0.26
SCLT1-202ENST00000439369 IPO4Q8TEX9 1081 aaKnown RBP13.4□□□□□ -0.26
SCLT1-202ENST00000439369 GDPD5Q8WTR4 605 aa13.4□□□□□ -0.26
SCLT1-202ENST00000439369 SECISBP2LQ93073 1101 aaKnown RBP13.4□□□□□ -0.26
SCLT1-202ENST00000439369 SMOQ99835 787 aa13.4□□□□□ -0.26
SCLT1-202ENST00000439369 SLC4A5Q9BY07 1137 aa13.4□□□□□ -0.26
SCLT1-202ENST00000439369 KCNF1Q9H3M0 494 aa13.4□□□□□ -0.26
SCLT1-202ENST00000439369 PLEKHA4Q9H4M7 779 aa13.4□□□□□ -0.26
SCLT1-202ENST00000439369 CERS4Q9HA82 394 aa13.4□□□□□ -0.26
SCLT1-202ENST00000439369 EHD2Q9NZN4 543 aa13.4□□□□□ -0.26
SCLT1-202ENST00000439369 FBXW11Q9UKB1 542 aa13.4□□□□□ -0.26
SCLT1-202ENST00000439369 STRIP2Q9ULQ0 834 aa13.4□□□□□ -0.26
SCLT1-202ENST00000439369 COL4A4P53420 1690 aaPredicted RBP13.4□□□□□ -0.26
SCLT1-202ENST00000439369 EPOPA6NHQ4 379 aa13.39□□□□□ -0.27
SCLT1-202ENST00000439369 CALB1P05937 261 aa13.39□□□□□ -0.27
SCLT1-202ENST00000439369 CFHP08603 1231 aa13.39□□□□□ -0.27
SCLT1-202ENST00000439369 CYP2F1P24903 491 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms