RNA–Protein interactions for RNA: ENST00000439068.6

LSMEM1-202, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene LSMEM1, Length 730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-202ENST00000439068 LILRA6Q6PI73 481 aa9.66□□□□□ -0.86
LSMEM1-202ENST00000439068 MOXD1Q6UVY6 613 aa9.66□□□□□ -0.86
LSMEM1-202ENST00000439068 Q6ZUG5 572 aa9.66□□□□□ -0.86
LSMEM1-202ENST00000439068 GRASPQ7Z6J2 395 aaPredicted RBP9.66□□□□□ -0.86
LSMEM1-202ENST00000439068 LILRB2Q8N423 598 aa9.66□□□□□ -0.86
LSMEM1-202ENST00000439068 FEZF2Q8TBJ5 459 aa9.66□□□□□ -0.86
LSMEM1-202ENST00000439068 CYB5D2Q8WUJ1 264 aa9.66□□□□□ -0.86
LSMEM1-202ENST00000439068 KLHL6Q8WZ60 621 aa9.66□□□□□ -0.86
LSMEM1-202ENST00000439068 BRF1Q92994 677 aa9.66□□□□□ -0.86
LSMEM1-202ENST00000439068 UTP4Q969X6 686 aaKnown RBP9.66□□□□□ -0.86
LSMEM1-202ENST00000439068 TMEM143Q96AN5 459 aa9.66□□□□□ -0.86
LSMEM1-202ENST00000439068 ZNF707Q96C28 371 aaPredicted RBP9.66□□□□□ -0.86
LSMEM1-202ENST00000439068 FAM20AQ96MK3 541 aa9.66□□□□□ -0.86
LSMEM1-202ENST00000439068 RTKNQ9BST9 563 aa9.66□□□□□ -0.86
LSMEM1-202ENST00000439068 FAM126AQ9BYI3 521 aaPredicted RBP9.66□□□□□ -0.86
LSMEM1-202ENST00000439068 CSRNP2Q9H175 543 aa9.66□□□□□ -0.86
LSMEM1-202ENST00000439068 ZSCAN32Q9NX65 697 aa9.66□□□□□ -0.86
LSMEM1-202ENST00000439068 VPS54Q9P1Q0 977 aa9.66□□□□□ -0.86
LSMEM1-202ENST00000439068 DDX25Q9UHL0 483 aaKnown RBP9.66□□□□□ -0.86
LSMEM1-202ENST00000439068 GMEB2Q9UKD1 530 aa9.66□□□□□ -0.86
LSMEM1-202ENST00000439068 ADAM28Q9UKQ2 775 aa9.66□□□□□ -0.86
LSMEM1-202ENST00000439068 TMA7Q9Y2S6 64 aaKnown RBP9.66□□□□□ -0.86
LSMEM1-202ENST00000439068 IPPQ9Y573 584 aa9.66□□□□□ -0.86
LSMEM1-202ENST00000439068 CACNA1BQ00975 2339 aa9.66□□□□□ -0.86
LSMEM1-202ENST00000439068 SF3B1O75533 1304 aaKnown RBP eCLIP9.65□□□□□ -0.864e-6■■■■■ 139.6
LSMEM1-202ENST00000439068 INO80B-WBP1J3KQ70 363 aa9.65□□□□□ -0.86
LSMEM1-202ENST00000439068 B4GALT3O60512 393 aa9.65□□□□□ -0.86
LSMEM1-202ENST00000439068 BAG4O95429 457 aaKnown RBP9.65□□□□□ -0.86
LSMEM1-202ENST00000439068 IFNAR1P17181 557 aa9.65□□□□□ -0.86
LSMEM1-202ENST00000439068 MAP4P27816 1152 aaKnown RBP9.65□□□□□ -0.86
LSMEM1-202ENST00000439068 PSMA5P28066 241 aa9.65□□□□□ -0.86
LSMEM1-202ENST00000439068 MLH1P40692 756 aa9.65□□□□□ -0.86
LSMEM1-202ENST00000439068 SCNN1GP51170 649 aa9.65□□□□□ -0.86
LSMEM1-202ENST00000439068 ATXN1P54253 815 aaKnown RBP9.65□□□□□ -0.86
LSMEM1-202ENST00000439068 NPEPPSP55786 919 aa9.65□□□□□ -0.86
LSMEM1-202ENST00000439068 POU5F1BQ06416 359 aa9.65□□□□□ -0.86
LSMEM1-202ENST00000439068 DSC1Q08554 894 aa9.65□□□□□ -0.86
LSMEM1-202ENST00000439068 CDK5R2Q13319 367 aa9.65□□□□□ -0.86
LSMEM1-202ENST00000439068 UVSSAQ2YD98 709 aa9.65□□□□□ -0.86
LSMEM1-202ENST00000439068 ADCK5Q3MIX3 580 aa9.65□□□□□ -0.86
LSMEM1-202ENST00000439068 UBXN11Q5T124 520 aa9.65□□□□□ -0.86
LSMEM1-202ENST00000439068 PLA2G4FQ68DD2 849 aa9.65□□□□□ -0.86
LSMEM1-202ENST00000439068 CPLX2Q6PUV4 134 aaKnown RBP9.65□□□□□ -0.86
LSMEM1-202ENST00000439068 BLOC1S2Q6QNY1 142 aa9.65□□□□□ -0.86
LSMEM1-202ENST00000439068 PARM1Q6UWI2 310 aa9.65□□□□□ -0.86
LSMEM1-202ENST00000439068 ZNF852Q6ZMS4 543 aa9.65□□□□□ -0.86
LSMEM1-202ENST00000439068 RTL10Q7L3V2 364 aa9.65□□□□□ -0.86
LSMEM1-202ENST00000439068 CDH24Q86UP0 819 aa9.65□□□□□ -0.86
LSMEM1-202ENST00000439068 FERMT3Q86UX7 667 aa9.65□□□□□ -0.86
LSMEM1-202ENST00000439068 RNF168Q8IYW5 571 aaPredicted RBP9.65□□□□□ -0.86
LSMEM1-202ENST00000439068 GJA10Q969M2 543 aa9.65□□□□□ -0.86
LSMEM1-202ENST00000439068 MYRFLQ96LU7 910 aa9.65□□□□□ -0.86
LSMEM1-202ENST00000439068 NAP1L4Q99733 375 aaKnown RBP9.65□□□□□ -0.86
LSMEM1-202ENST00000439068 MIPEPQ99797 713 aa9.65□□□□□ -0.86
LSMEM1-202ENST00000439068 APOL6Q9BWW8 343 aa9.65□□□□□ -0.86
LSMEM1-202ENST00000439068 DHX33Q9H6R0 707 aaKnown RBP9.65□□□□□ -0.86
LSMEM1-202ENST00000439068 MARCH5Q9NX47 278 aa9.65□□□□□ -0.86
LSMEM1-202ENST00000439068 USP18Q9UMW8 372 aa9.65□□□□□ -0.86
LSMEM1-202ENST00000439068 TPRP12270 2363 aaKnown RBP9.65□□□□□ -0.87
LSMEM1-202ENST00000439068 CPLX1O14810 134 aa9.64□□□□□ -0.87
LSMEM1-202ENST00000439068 ADAMTS3O15072 1205 aa9.64□□□□□ -0.87
LSMEM1-202ENST00000439068 SLITRK5O94991 958 aa9.64□□□□□ -0.87
LSMEM1-202ENST00000439068 GLULP15104 373 aa9.64□□□□□ -0.87
LSMEM1-202ENST00000439068 HOXA9P31269 272 aa9.64□□□□□ -0.87
LSMEM1-202ENST00000439068 YWHABP31946 246 aaKnown RBP9.64□□□□□ -0.87
LSMEM1-202ENST00000439068 SLC7A5Q01650 507 aa9.64□□□□□ -0.87
LSMEM1-202ENST00000439068 ELAVL2Q12926 359 aaKnown RBP9.64□□□□□ -0.87
LSMEM1-202ENST00000439068 GRIK3Q13003 919 aa9.64□□□□□ -0.87
LSMEM1-202ENST00000439068 PPP2R5CQ13362 524 aa9.64□□□□□ -0.87
LSMEM1-202ENST00000439068 XKR9Q5GH70 373 aa9.64□□□□□ -0.87
LSMEM1-202ENST00000439068 PPP4R3AQ6IN85 833 aa9.64□□□□□ -0.87
LSMEM1-202ENST00000439068 B3GNT9Q6UX72 402 aa9.64□□□□□ -0.87
LSMEM1-202ENST00000439068 SEZ6L2Q6UXD5 910 aa9.64□□□□□ -0.87
LSMEM1-202ENST00000439068 CD163Q86VB7 1156 aa9.64□□□□□ -0.87
LSMEM1-202ENST00000439068 CEP57Q86XR8 500 aa9.64□□□□□ -0.87
LSMEM1-202ENST00000439068 C4orf19Q8IY42 314 aa9.64□□□□□ -0.87
LSMEM1-202ENST00000439068 BLIDQ8IZY5 108 aa9.64□□□□□ -0.87
LSMEM1-202ENST00000439068 DNAJB8Q8NHS0 232 aa9.64□□□□□ -0.87
LSMEM1-202ENST00000439068 EZH1Q92800 747 aaPredicted RBP9.64□□□□□ -0.87
LSMEM1-202ENST00000439068 FGF13Q92913 245 aa9.64□□□□□ -0.87
LSMEM1-202ENST00000439068 FGF14Q92915 247 aa9.64□□□□□ -0.87
LSMEM1-202ENST00000439068 CHAMP1Q96JM3 812 aa9.64□□□□□ -0.87
LSMEM1-202ENST00000439068 CCDC43Q96MW1 224 aaKnown RBP9.64□□□□□ -0.87
LSMEM1-202ENST00000439068 PSMG3-AS1Q96PY0 264 aa9.64□□□□□ -0.87
LSMEM1-202ENST00000439068 TTPALQ9BTX7 342 aa9.64□□□□□ -0.87
LSMEM1-202ENST00000439068 DDX23Q9BUQ8 820 aaKnown RBP9.64□□□□□ -0.87
LSMEM1-202ENST00000439068 PHF20Q9BVI0 1012 aa9.64□□□□□ -0.87
LSMEM1-202ENST00000439068 GPR62Q9BZJ7 368 aa9.64□□□□□ -0.87
LSMEM1-202ENST00000439068 MINDY3Q9H8M7 445 aa9.64□□□□□ -0.87
LSMEM1-202ENST00000439068 PFDN2Q9UHV9 154 aa9.64□□□□□ -0.87
LSMEM1-202ENST00000439068 KCNH3Q9ULD8 1083 aa9.64□□□□□ -0.87
LSMEM1-202ENST00000439068 DMXL1Q9Y485 3027 aa9.64□□□□□ -0.87
LSMEM1-202ENST00000439068 NCOR2Q9Y618 2525 aa9.63□□□□□ -0.87
LSMEM1-202ENST00000439068 CEP250Q9BV73 2442 aa9.63□□□□□ -0.87
LSMEM1-202ENST00000439068 FRYLO94915 3013 aa9.63□□□□□ -0.87
LSMEM1-202ENST00000439068 MAN2B1O00754 1011 aa9.63□□□□□ -0.87
LSMEM1-202ENST00000439068 TDP2O95551 362 aa9.63□□□□□ -0.87
LSMEM1-202ENST00000439068 EFEMP2O95967 443 aa9.63□□□□□ -0.87
LSMEM1-202ENST00000439068 GCFC2P16383 781 aaKnown RBP9.63□□□□□ -0.87
LSMEM1-202ENST00000439068 XBP1P17861 261 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms