RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 ARHGAP9Q9BRR9 750 aa6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 MED10Q9BTT4 135 aa6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 XYLT2Q9H1B5 865 aa6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 SMYD3Q9H7B4 428 aa6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 KCNK12Q9HB15 430 aa6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 CRTAC1Q9NQ79 661 aa6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 ARMCX3Q9UH62 379 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 CDH9Q9ULB4 789 aa6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 YIPF1Q9Y548 306 aa6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 MYH10P35580 1976 aa6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 A0A1W2PRU2 124 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 CLDN5O00501 218 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 NRG2O14511 850 aaPredicted RBP6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 DCXO43602 365 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 NARSO43776 548 aaKnown RBP6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 STX10O60499 249 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 TACC1O75410 805 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 ASS1P00966 412 aaKnown RBP6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 ATF6P18850 670 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 BDNFP23560 247 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 PCSK1P29120 753 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 HOXA9P31269 272 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 CCR2P41597 374 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 NDST1P52848 882 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 NLRP12P59046 1061 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 ZXDAP98168 799 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 VAC14Q08AM6 782 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 IFRD2Q12894 506 aaPredicted RBP6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 PLD1Q13393 1074 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 NFE2Q16621 373 aaPredicted RBP6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 DPCR1Q3MIW9 517 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 CBWD6Q4V339 395 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 ZNF394Q53GI3 561 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 WDR44Q5JSH3 913 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 CBWD3Q5JTY5 395 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 PRSS36Q5K4E3 855 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 CBWD5Q5RIA9 395 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 STXBP5Q5T5C0 1151 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 TTI2Q6NXR4 508 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 FAM171BQ6P995 826 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 LIMS2Q7Z4I7 341 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 FRMD5Q7Z6J6 570 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 ZDHHC14Q8IZN3 488 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 SLC44A3Q8N4M1 653 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 ZNF511Q8NB15 262 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 MLKLQ8NB16 471 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 FBXL13Q8NEE6 735 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 TTC16Q8NEE8 873 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 MYCBPAPQ8TBZ2 947 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 SPPL2BQ8TCT7 592 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 C2orf15Q8WU43 125 aaKnown RBP6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 TAF4BQ92750 862 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 FGF14Q92915 247 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 SLC35C1Q96A29 364 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 MYLPFQ96A32 169 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 PCED1BQ96HM7 432 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 CEP63Q96MT8 703 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 PKMYT1Q99640 499 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 KXD1Q9BQD3 176 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 MKNK1Q9BUB5 465 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 LRRC3Q9BY71 257 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 B3GNT5Q9BYG0 378 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 PLA2G2FQ9BZM2 168 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 IMPG2Q9BZV3 1241 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 DNAJC25Q9H1X3 360 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 ATXN3LQ9H3M9 355 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 APOBEC3GQ9HC16 384 aaKnown RBP6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 METTL14Q9HCE5 456 aaKnown RBP6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 TMEM8AQ9HCN3 771 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 ZNF334Q9HCZ1 680 aaPredicted RBP6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 ASAH2Q9NR71 780 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 RAB20Q9NX57 234 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 RWDD2AQ9UIY3 292 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 CDH7Q9ULB5 785 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 MAFFQ9ULX9 164 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 USTQ9Y2C2 406 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 NUMBLQ9Y6R0 609 aa6.15□□□□□ -1.42
HMGB3P24-201ENST00000433260 ZNF638Q14966 1978 aaKnown RBP6.15□□□□□ -1.43
HMGB3P24-201ENST00000433260 SLC38A8A6NNN8 435 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 ZNF197O14709 1029 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 SLC16A3O15427 465 aaKnown RBP6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 MOSPD3O75425 235 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 FGFR1OPO95684 399 aaKnown RBP6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 STAU1O95793 577 aaKnown RBP6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 ABL1P00519 1130 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 FAM163BP0C2L3 166 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 CCDC192P0DO97 292 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 P4HA1P13674 534 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 CEBPBP17676 345 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 ANXA13P27216 316 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 GABRR2P28476 465 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 ADORA2BP29275 332 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 GTF2H1P32780 548 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 VIPR2P41587 438 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 ASPAP45381 313 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 FMO5P49326 533 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 MXI1P50539 228 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 CACNA2D1P54289 1103 aa6.14□□□□□ -1.43
HMGB3P24-201ENST00000433260 RPL10AP62906 217 aaKnown RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms