RNA–Protein interactions for RNA: ENST00000431473.3

RIMKLA-202, Transcript of ribosomal modification protein rimK like family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIMKLA, Length 8,909 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLA-202ENST00000431473 DDI1Q8WTU0 396 aa12.16□□□□□ -0.46
RIMKLA-202ENST00000431473 FAM84BQ96KN1 310 aaPredicted RBP12.16□□□□□ -0.46
RIMKLA-202ENST00000431473 CAPN10Q9HC96 672 aa12.16□□□□□ -0.46
RIMKLA-202ENST00000431473 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.16□□□□□ -0.46
RIMKLA-202ENST00000431473 ADGRA3Q8IWK6 1321 aa12.16□□□□□ -0.46
RIMKLA-202ENST00000431473 RASSF9O75901 435 aa12.16□□□□□ -0.46
RIMKLA-202ENST00000431473 GTF2H3Q13889 308 aa12.16□□□□□ -0.46
RIMKLA-202ENST00000431473 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.16□□□□□ -0.46
RIMKLA-202ENST00000431473 NSUN4Q96CB9 384 aaKnown RBP12.16□□□□□ -0.46
RIMKLA-202ENST00000431473 OTUD5Q96G74 571 aa12.16□□□□□ -0.46
RIMKLA-202ENST00000431473 FAM129AQ9BZQ8 928 aa12.16□□□□□ -0.46
RIMKLA-202ENST00000431473 MRGBPQ9NV56 204 aa12.16□□□□□ -0.46
RIMKLA-202ENST00000431473 WHRNQ9P202 907 aa12.16□□□□□ -0.46
RIMKLA-202ENST00000431473 NR5A2O00482 541 aa12.16□□□□□ -0.46
RIMKLA-202ENST00000431473 PMPCBO75439 489 aa12.16□□□□□ -0.46
RIMKLA-202ENST00000431473 RAD51Q06609 339 aa12.16□□□□□ -0.46
RIMKLA-202ENST00000431473 CENPLQ8N0S6 344 aaPredicted RBP12.16□□□□□ -0.46
RIMKLA-202ENST00000431473 CALML6Q8TD86 181 aa12.16□□□□□ -0.46
RIMKLA-202ENST00000431473 DDX18Q9NVP1 670 aaKnown RBP12.16□□□□□ -0.46
RIMKLA-202ENST00000431473 RPS6KL1Q9Y6S9 549 aa12.16□□□□□ -0.46
RIMKLA-202ENST00000431473 H2AFYO75367 372 aaKnown RBP12.16□□□□□ -0.46
RIMKLA-202ENST00000431473 KCTD17Q8N5Z5 321 aa12.16□□□□□ -0.46
RIMKLA-202ENST00000431473 DDX50Q9BQ39 737 aaKnown RBP12.16□□□□□ -0.46
RIMKLA-202ENST00000431473 TIPINQ9BVW5 301 aa12.16□□□□□ -0.46
RIMKLA-202ENST00000431473 CAPN6Q9Y6Q1 641 aa12.16□□□□□ -0.46
RIMKLA-202ENST00000431473 PLA2R1Q13018 1463 aa12.16□□□□□ -0.46
RIMKLA-202ENST00000431473 ALKQ9UM73 1620 aa12.16□□□□□ -0.46
RIMKLA-202ENST00000431473 TMEM253P0C7T8 217 aa12.16□□□□□ -0.46
RIMKLA-202ENST00000431473 WASHC5Q12768 1159 aa12.16□□□□□ -0.46
RIMKLA-202ENST00000431473 MMRN1Q13201 1228 aa12.16□□□□□ -0.46
RIMKLA-202ENST00000431473 PGS1Q32NB8 556 aa12.16□□□□□ -0.46
RIMKLA-202ENST00000431473 EDRF1Q3B7T1 1238 aa12.16□□□□□ -0.46
RIMKLA-202ENST00000431473 KCNT1Q5JUK3 1230 aa12.16□□□□□ -0.46
RIMKLA-202ENST00000431473 TDRD5Q8NAT2 981 aaKnown RBP12.16□□□□□ -0.46
RIMKLA-202ENST00000431473 SOX13Q9UN79 622 aa12.16□□□□□ -0.46
RIMKLA-202ENST00000431473 H3BQF6 201 aa12.15□□□□□ -0.46
RIMKLA-202ENST00000431473 SARSP49591 514 aaKnown RBP12.15□□□□□ -0.46
RIMKLA-202ENST00000431473 EIF2B2P49770 351 aaKnown RBP12.15□□□□□ -0.46
RIMKLA-202ENST00000431473 SYN2Q92777 582 aaPredicted RBP12.15□□□□□ -0.46
RIMKLA-202ENST00000431473 MTMR4Q9NYA4 1195 aa12.15□□□□□ -0.46
RIMKLA-202ENST00000431473 DGAT1O75907 488 aa12.15□□□□□ -0.46
RIMKLA-202ENST00000431473 GRK2P25098 689 aa12.15□□□□□ -0.46
RIMKLA-202ENST00000431473 CHI3L1P36222 383 aaPredicted RBP12.15□□□□□ -0.46
RIMKLA-202ENST00000431473 EMC2Q15006 297 aa12.15□□□□□ -0.46
RIMKLA-202ENST00000431473 WDR93Q6P2C0 686 aa12.15□□□□□ -0.46
RIMKLA-202ENST00000431473 OR6J1Q8NGC5 347 aa12.15□□□□□ -0.46
RIMKLA-202ENST00000431473 GPR63Q9BZJ6 419 aa12.15□□□□□ -0.46
RIMKLA-202ENST00000431473 CYP4F12Q9HCS2 524 aa12.15□□□□□ -0.46
RIMKLA-202ENST00000431473 EXTL3O43909 919 aa12.15□□□□□ -0.46
RIMKLA-202ENST00000431473 TP53BP2Q13625 1128 aa12.15□□□□□ -0.46
RIMKLA-202ENST00000431473 SUGP1Q8IWZ8 645 aaKnown RBP12.15□□□□□ -0.46
RIMKLA-202ENST00000431473 TMEM121Q9BTD3 319 aa12.15□□□□□ -0.46
RIMKLA-202ENST00000431473 VPS33BQ9H267 617 aa12.15□□□□□ -0.46
RIMKLA-202ENST00000431473 PCDHB8Q9UN66 801 aa12.15□□□□□ -0.46
RIMKLA-202ENST00000431473 ADGRL3Q9HAR2 1447 aa12.15□□□□□ -0.46
RIMKLA-202ENST00000431473 SEPT5Q99719 369 aaPredicted RBP12.15□□□□□ -0.46
RIMKLA-202ENST00000431473 RIC8BQ9NVN3 520 aa12.15□□□□□ -0.46
RIMKLA-202ENST00000431473 A0A087X0T9 212 aa12.15□□□□□ -0.46
RIMKLA-202ENST00000431473 RHOBTB1O94844 696 aa12.15□□□□□ -0.46
RIMKLA-202ENST00000431473 FAM228BP0C875 321 aa12.15□□□□□ -0.46
RIMKLA-202ENST00000431473 TRAF2Q12933 501 aa12.15□□□□□ -0.46
RIMKLA-202ENST00000431473 PTK6Q13882 451 aa12.15□□□□□ -0.46
RIMKLA-202ENST00000431473 SLC13A5Q86YT5 568 aaPredicted RBP12.15□□□□□ -0.46
RIMKLA-202ENST00000431473 ZNF333Q96JL9 665 aa12.15□□□□□ -0.46
RIMKLA-202ENST00000431473 CATSPERBQ9H7T0 1116 aa12.15□□□□□ -0.46
RIMKLA-202ENST00000431473 KCND2Q9NZV8 630 aa12.15□□□□□ -0.46
RIMKLA-202ENST00000431473 C6orf203Q9P0P8 240 aaPredicted RBP12.15□□□□□ -0.46
RIMKLA-202ENST00000431473 ATF5Q9Y2D1 282 aaPredicted RBP12.15□□□□□ -0.46
RIMKLA-202ENST00000431473 PDZK1P1A8MUH7 402 aa12.15□□□□□ -0.46
RIMKLA-202ENST00000431473 ACAD10Q6JQN1 1059 aa12.15□□□□□ -0.46
RIMKLA-202ENST00000431473 C1orf131Q8NDD1 294 aaKnown RBP12.15□□□□□ -0.46
RIMKLA-202ENST00000431473 BHMTQ93088 406 aa12.15□□□□□ -0.46
RIMKLA-202ENST00000431473 HPDLQ96IR7 371 aa12.15□□□□□ -0.46
RIMKLA-202ENST00000431473 ZSWIM1Q9BR11 485 aa12.15□□□□□ -0.46
RIMKLA-202ENST00000431473 MTA3Q9BTC8 594 aa12.15□□□□□ -0.46
RIMKLA-202ENST00000431473 NEO1Q92859 1461 aa12.15□□□□□ -0.47
RIMKLA-202ENST00000431473 TADA2AO75478 443 aa12.15□□□□□ -0.47
RIMKLA-202ENST00000431473 CD44P16070 742 aaKnown RBP12.15□□□□□ -0.47
RIMKLA-202ENST00000431473 H2AFXP16104 143 aaPredicted RBP12.15□□□□□ -0.47
RIMKLA-202ENST00000431473 HMGCS2P54868 508 aa12.15□□□□□ -0.47
RIMKLA-202ENST00000431473 SEL1L3Q68CR1 1132 aa12.15□□□□□ -0.47
RIMKLA-202ENST00000431473 NFKBIL1Q9UBC1 381 aaPredicted RBP12.15□□□□□ -0.47
RIMKLA-202ENST00000431473 CITO14578 2027 aa12.15□□□□□ -0.47
RIMKLA-202ENST00000431473 IGSF9BQ9UPX0 1349 aa12.15□□□□□ -0.47
RIMKLA-202ENST00000431473 RGS4P49798 205 aa12.14□□□□□ -0.47
RIMKLA-202ENST00000431473 BNC2Q6ZN30 1099 aaPredicted RBP12.14□□□□□ -0.47
RIMKLA-202ENST00000431473 LRRC6Q86X45 466 aa12.14□□□□□ -0.47
RIMKLA-202ENST00000431473 UNC45BQ8IWX7 931 aa12.14□□□□□ -0.47
RIMKLA-202ENST00000431473 JADE3Q92613 823 aa12.14□□□□□ -0.47
RIMKLA-202ENST00000431473 OSBPL10Q9BXB5 764 aa12.14□□□□□ -0.47
RIMKLA-202ENST00000431473 SYBUQ9NX95 663 aa12.14□□□□□ -0.47
RIMKLA-202ENST00000431473 RALBP11234 206 aa12.14□□□□□ -0.47
RIMKLA-202ENST00000431473 PAX7P23759 505 aa12.14□□□□□ -0.47
RIMKLA-202ENST00000431473 PRIM2P49643 509 aa12.14□□□□□ -0.47
RIMKLA-202ENST00000431473 SERPINB8P50452 374 aa12.14□□□□□ -0.47
RIMKLA-202ENST00000431473 PRKCEQ02156 737 aa12.14□□□□□ -0.47
RIMKLA-202ENST00000431473 ZNF543Q08ER8 600 aa12.14□□□□□ -0.47
RIMKLA-202ENST00000431473 ARHGEF6Q15052 776 aa12.14□□□□□ -0.47
RIMKLA-202ENST00000431473 AGAP9Q5VTM2 703 aa12.14□□□□□ -0.47
RIMKLA-202ENST00000431473 TMED8Q6PL24 325 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms