RNA–Protein interactions for RNA: ENST00000430591.1

SMC6-205, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-205ENST00000430591 PRAMEF12O95522 483 aa7.07□□□□□ -1.28
SMC6-205ENST00000430591 LRG1P02750 347 aa7.07□□□□□ -1.28
SMC6-205ENST00000430591 HNRNPA1P09651 372 aaKnown RBP eCLIP7.07□□□□□ -1.28
SMC6-205ENST00000430591 HAPLN1P10915 354 aaPredicted RBP7.07□□□□□ -1.28
SMC6-205ENST00000430591 HOXC13P31276 330 aa7.07□□□□□ -1.28
SMC6-205ENST00000430591 ELF1P32519 619 aa7.07□□□□□ -1.28
SMC6-205ENST00000430591 ASPAP45381 313 aa7.07□□□□□ -1.28
SMC6-205ENST00000430591 PGFP49763 221 aa7.07□□□□□ -1.28
SMC6-205ENST00000430591 VAMP7P51809 220 aa7.07□□□□□ -1.28
SMC6-205ENST00000430591 CLDN10P78369 228 aa7.07□□□□□ -1.28
SMC6-205ENST00000430591 POU5F1Q01860 360 aaKnown RBP7.07□□□□□ -1.28
SMC6-205ENST00000430591 APBA1Q02410 837 aa7.07□□□□□ -1.28
SMC6-205ENST00000430591 CREMQ03060 361 aa7.07□□□□□ -1.28
SMC6-205ENST00000430591 ADAM9Q13443 819 aa7.07□□□□□ -1.28
SMC6-205ENST00000430591 HTR4Q13639 388 aa7.07□□□□□ -1.28
SMC6-205ENST00000430591 NCOA4Q13772 614 aa7.07□□□□□ -1.28
SMC6-205ENST00000430591 WDR72Q3MJ13 1102 aa7.07□□□□□ -1.28
SMC6-205ENST00000430591 MGAT5BQ3V5L5 792 aa7.07□□□□□ -1.28
SMC6-205ENST00000430591 ZACNQ401N2 412 aa7.07□□□□□ -1.28
SMC6-205ENST00000430591 CBWD6Q4V339 395 aa7.07□□□□□ -1.28
SMC6-205ENST00000430591 MDH1BQ5I0G3 518 aa7.07□□□□□ -1.28
SMC6-205ENST00000430591 INTS6LQ5JSJ4 861 aaKnown RBP7.07□□□□□ -1.28
SMC6-205ENST00000430591 CBWD3Q5JTY5 395 aa7.07□□□□□ -1.28
SMC6-205ENST00000430591 CBWD5Q5RIA9 395 aa7.07□□□□□ -1.28
SMC6-205ENST00000430591 TANGO2Q6ICL3 276 aa7.07□□□□□ -1.28
SMC6-205ENST00000430591 TTI2Q6NXR4 508 aa7.07□□□□□ -1.28
SMC6-205ENST00000430591 PDXDC1Q6P996 788 aa7.07□□□□□ -1.28
SMC6-205ENST00000430591 TREML4Q6UXN2 200 aa7.07□□□□□ -1.28
SMC6-205ENST00000430591 PAQR9Q6ZVX9 377 aa7.07□□□□□ -1.28
SMC6-205ENST00000430591 VASH1Q7L8A9 365 aaPredicted RBP7.07□□□□□ -1.28
SMC6-205ENST00000430591 TMEM150AQ86TG1 271 aa7.07□□□□□ -1.28
SMC6-205ENST00000430591 FAM186BQ8IYM0 893 aa7.07□□□□□ -1.28
SMC6-205ENST00000430591 ZDHHC14Q8IZN3 488 aa7.07□□□□□ -1.28
SMC6-205ENST00000430591 SLC44A3Q8N4M1 653 aa7.07□□□□□ -1.28
SMC6-205ENST00000430591 GPT2Q8TD30 523 aa7.07□□□□□ -1.28
SMC6-205ENST00000430591 HDAC7Q8WUI4 952 aa7.07□□□□□ -1.28
SMC6-205ENST00000430591 CACTINQ8WUQ7 758 aaKnown RBP7.07□□□□□ -1.28
SMC6-205ENST00000430591 EDAQ92838 391 aa7.07□□□□□ -1.28
SMC6-205ENST00000430591 MYLPFQ96A32 169 aa7.07□□□□□ -1.28
SMC6-205ENST00000430591 PCMTD1Q96MG8 357 aaPredicted RBP7.07□□□□□ -1.28
SMC6-205ENST00000430591 ZNF560Q96MR9 790 aa7.07□□□□□ -1.28
SMC6-205ENST00000430591 TIGD1Q96MW7 591 aa7.07□□□□□ -1.28
SMC6-205ENST00000430591 NECTIN4Q96NY8 510 aa7.07□□□□□ -1.28
SMC6-205ENST00000430591 SYT15Q9BQS2 421 aa7.07□□□□□ -1.28
SMC6-205ENST00000430591 ARHGAP9Q9BRR9 750 aa7.07□□□□□ -1.28
SMC6-205ENST00000430591 GDAP2Q9NXN4 497 aa7.07□□□□□ -1.28
SMC6-205ENST00000430591 CA14Q9ULX7 337 aa7.07□□□□□ -1.28
SMC6-205ENST00000430591 MRPS23Q9Y3D9 190 aaKnown RBP7.07□□□□□ -1.28
SMC6-205ENST00000430591 MUC6Q6W4X9 2439 aa7.07□□□□□ -1.28
SMC6-205ENST00000430591 PATJQ8NI35 1801 aa7.06□□□□□ -1.28
SMC6-205ENST00000430591 HELZP42694 1942 aaKnown RBP7.06□□□□□ -1.28
SMC6-205ENST00000430591 ATG2BQ96BY7 2078 aa7.06□□□□□ -1.28
SMC6-205ENST00000430591 MYOFQ9NZM1 2061 aa7.06□□□□□ -1.28
SMC6-205ENST00000430591 SHISA7A6NL88 538 aa7.06□□□□□ -1.28
SMC6-205ENST00000430591 ANHXE9PGG2 379 aa7.06□□□□□ -1.28
SMC6-205ENST00000430591 SCAMP3O14828 347 aaKnown RBP7.06□□□□□ -1.28
SMC6-205ENST00000430591 KIAA0391O15091 583 aaKnown RBP7.06□□□□□ -1.28
SMC6-205ENST00000430591 CALUO43852 315 aaPredicted RBP7.06□□□□□ -1.28
SMC6-205ENST00000430591 KINO60870 393 aaKnown RBP7.06□□□□□ -1.28
SMC6-205ENST00000430591 PHACTR2O75167 634 aa7.06□□□□□ -1.28
SMC6-205ENST00000430591 BEST1O76090 585 aa7.06□□□□□ -1.28
SMC6-205ENST00000430591 MYL1P05976 194 aa7.06□□□□□ -1.28
SMC6-205ENST00000430591 CCDC130P13994 396 aa7.06□□□□□ -1.28
SMC6-205ENST00000430591 HMGA1P17096 107 aaKnown RBP7.06□□□□□ -1.28
SMC6-205ENST00000430591 NPR3P17342 541 aa7.06□□□□□ -1.28
SMC6-205ENST00000430591 CD72P21854 359 aa7.06□□□□□ -1.28
SMC6-205ENST00000430591 WARSP23381 471 aaKnown RBP7.06□□□□□ -1.28
SMC6-205ENST00000430591 BDNFP23560 247 aa7.06□□□□□ -1.28
SMC6-205ENST00000430591 HOXA9P31269 272 aa7.06□□□□□ -1.28
SMC6-205ENST00000430591 PIK3CAP42336 1068 aa7.06□□□□□ -1.28
SMC6-205ENST00000430591 UBE2HP62256 183 aa7.06□□□□□ -1.28
SMC6-205ENST00000430591 GPC5P78333 572 aa7.06□□□□□ -1.28
SMC6-205ENST00000430591 LRMPQ12912 555 aa7.06□□□□□ -1.28
SMC6-205ENST00000430591 MYBPC2Q14324 1141 aa7.06□□□□□ -1.28
SMC6-205ENST00000430591 UVSSAQ2YD98 709 aa7.06□□□□□ -1.28
SMC6-205ENST00000430591 ZNF699Q32M78 642 aa7.06□□□□□ -1.28
SMC6-205ENST00000430591 HSP90AA4PQ58FG1 418 aa7.06□□□□□ -1.28
SMC6-205ENST00000430591 DCAF17Q5H9S7 520 aaPredicted RBP7.06□□□□□ -1.28
SMC6-205ENST00000430591 FAM78AQ5JUQ0 283 aa7.06□□□□□ -1.28
SMC6-205ENST00000430591 TMEM31Q5JXX7 168 aa7.06□□□□□ -1.28
SMC6-205ENST00000430591 TPGS2Q68CL5 300 aa7.06□□□□□ -1.28
SMC6-205ENST00000430591 MRPL14Q6P1L8 145 aaKnown RBP7.06□□□□□ -1.28
SMC6-205ENST00000430591 OTOP3Q7RTS5 596 aa7.06□□□□□ -1.28
SMC6-205ENST00000430591 DNAJB7Q7Z6W7 309 aaPredicted RBP7.06□□□□□ -1.28
SMC6-205ENST00000430591 METTL23Q86XA0 190 aa7.06□□□□□ -1.28
SMC6-205ENST00000430591 NT5DC4Q86YG4 428 aa7.06□□□□□ -1.28
SMC6-205ENST00000430591 SCN4BQ8IWT1 228 aa7.06□□□□□ -1.28
SMC6-205ENST00000430591 ZC3H3Q8IXZ2 948 aaKnown RBP7.06□□□□□ -1.28
SMC6-205ENST00000430591 OR6B3Q8NGW1 331 aa7.06□□□□□ -1.28
SMC6-205ENST00000430591 TTC8Q8TAM2 541 aa7.06□□□□□ -1.28
SMC6-205ENST00000430591 NELFBQ8WX92 580 aa7.06□□□□□ -1.28
SMC6-205ENST00000430591 KAT5Q92993 513 aa7.06□□□□□ -1.28
SMC6-205ENST00000430591 PCED1BQ96HM7 432 aa7.06□□□□□ -1.28
SMC6-205ENST00000430591 IPO9Q96P70 1041 aaKnown RBP7.06□□□□□ -1.28
SMC6-205ENST00000430591 GSDMAQ96QA5 445 aa7.06□□□□□ -1.28
SMC6-205ENST00000430591 SLC22A12Q96S37 553 aa7.06□□□□□ -1.28
SMC6-205ENST00000430591 TSPAN18Q96SJ8 248 aa7.06□□□□□ -1.28
SMC6-205ENST00000430591 B3GNT5Q9BYG0 378 aa7.06□□□□□ -1.28
SMC6-205ENST00000430591 ZNF518BQ9C0D4 1074 aa7.06□□□□□ -1.28
SMC6-205ENST00000430591 ELOVL4Q9GZR5 314 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms