RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 RPF1Q9H9Y2 349 aaKnown RBP12.04□□□□□ -0.48
CECR3-201ENST00000428828 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.04□□□□□ -0.48
CECR3-201ENST00000428828 KLK14Q9P0G3 267 aa12.04□□□□□ -0.48
CECR3-201ENST00000428828 ARMCX3Q9UH62 379 aaPredicted RBP12.04□□□□□ -0.48
CECR3-201ENST00000428828 CPSF3Q9UKF6 684 aaKnown RBP12.04□□□□□ -0.48
CECR3-201ENST00000428828 CEP290O15078 2479 aa12.04□□□□□ -0.48
CECR3-201ENST00000428828 SNX3O60493 162 aa12.03□□□□□ -0.48
CECR3-201ENST00000428828 CAPN15O75808 1086 aa12.03□□□□□ -0.48
CECR3-201ENST00000428828 RECQL4O94761 1208 aa12.03□□□□□ -0.48
CECR3-201ENST00000428828 GNA14O95837 355 aa12.03□□□□□ -0.48
CECR3-201ENST00000428828 CDC25CP30307 473 aa12.03□□□□□ -0.48
CECR3-201ENST00000428828 GRM5P41594 1212 aa12.03□□□□□ -0.48
CECR3-201ENST00000428828 DLG4P78352 724 aa12.03□□□□□ -0.48
CECR3-201ENST00000428828 FPGSQ05932 587 aa12.03□□□□□ -0.48
CECR3-201ENST00000428828 CYP24A1Q07973 514 aa12.03□□□□□ -0.48
CECR3-201ENST00000428828 BFSP1Q12934 665 aa12.03□□□□□ -0.48
CECR3-201ENST00000428828 ENOX2Q16206 610 aaKnown RBP12.03□□□□□ -0.48
CECR3-201ENST00000428828 CNKSR3Q6P9H4 555 aa12.03□□□□□ -0.48
CECR3-201ENST00000428828 FAM136AQ96C01 138 aa12.03□□□□□ -0.48
CECR3-201ENST00000428828 VWCEQ96DN2 955 aa12.03□□□□□ -0.48
CECR3-201ENST00000428828 FBXL18Q96ME1 805 aa12.03□□□□□ -0.48
CECR3-201ENST00000428828 ACAP3Q96P50 834 aa12.03□□□□□ -0.48
CECR3-201ENST00000428828 POP1Q99575 1024 aaKnown RBP12.03□□□□□ -0.48
CECR3-201ENST00000428828 HINFPQ9BQA5 517 aa12.03□□□□□ -0.48
CECR3-201ENST00000428828 MKNK1Q9BUB5 465 aa12.03□□□□□ -0.48
CECR3-201ENST00000428828 CXCL16Q9H2A7 254 aa12.03□□□□□ -0.48
CECR3-201ENST00000428828 RGS18Q9NS28 235 aa12.03□□□□□ -0.48
CECR3-201ENST00000428828 ZNF510Q9Y2H8 683 aa12.03□□□□□ -0.48
CECR3-201ENST00000428828 GBF1Q92538 1859 aa12.03□□□□□ -0.48
CECR3-201ENST00000428828 ATP5HO75947 161 aa12.03□□□□□ -0.48
CECR3-201ENST00000428828 UBOX5O94941 541 aa12.03□□□□□ -0.48
CECR3-201ENST00000428828 MOCS3O95396 460 aa12.03□□□□□ -0.48
CECR3-201ENST00000428828 KRT16P08779 473 aa12.03□□□□□ -0.48
CECR3-201ENST00000428828 ITGA4P13612 1032 aa12.03□□□□□ -0.48
CECR3-201ENST00000428828 TRIM21P19474 475 aaKnown RBP12.03□□□□□ -0.48
CECR3-201ENST00000428828 PCK1P35558 622 aa12.03□□□□□ -0.48
CECR3-201ENST00000428828 PEX5P50542 639 aa12.03□□□□□ -0.48
CECR3-201ENST00000428828 VAMP7P51809 220 aa12.03□□□□□ -0.48
CECR3-201ENST00000428828 YARSP54577 528 aaKnown RBP12.03□□□□□ -0.48
CECR3-201ENST00000428828 MYLK4Q86YV6 388 aaPredicted RBP12.03□□□□□ -0.48
CECR3-201ENST00000428828 BRSK2Q8IWQ3 736 aa12.03□□□□□ -0.48
CECR3-201ENST00000428828 TRIM42Q8IWZ5 723 aa12.03□□□□□ -0.48
CECR3-201ENST00000428828 PLEKHO2Q8TD55 490 aa12.03□□□□□ -0.48
CECR3-201ENST00000428828 TUBGCP2Q9BSJ2 902 aa12.03□□□□□ -0.48
CECR3-201ENST00000428828 TRIM7Q9C029 511 aa12.03□□□□□ -0.48
CECR3-201ENST00000428828 TSPYL2Q9H2G4 693 aaPredicted RBP12.03□□□□□ -0.48
CECR3-201ENST00000428828 KIAA1586Q9HCI6 787 aa12.03□□□□□ -0.48
CECR3-201ENST00000428828 TOPORSQ9NS56 1045 aaPredicted RBP12.03□□□□□ -0.48
CECR3-201ENST00000428828 A0A0U1RQF3 1178 aa12.02□□□□□ -0.49
CECR3-201ENST00000428828 GJB6O95452 261 aa12.02□□□□□ -0.49
CECR3-201ENST00000428828 LMNAP02545 664 aaKnown RBP12.02□□□□□ -0.49
CECR3-201ENST00000428828 MMEP08473 750 aa12.02□□□□□ -0.49
CECR3-201ENST00000428828 NUDT17P0C025 328 aa12.02□□□□□ -0.49
CECR3-201ENST00000428828 CCDC166P0CW27 439 aa12.02□□□□□ -0.49
CECR3-201ENST00000428828 MLH1P40692 756 aa12.02□□□□□ -0.49
CECR3-201ENST00000428828 PPIGQ13427 754 aaKnown RBP eCLIP12.02□□□□□ -0.49
CECR3-201ENST00000428828 IKBKEQ14164 716 aa12.02□□□□□ -0.49
CECR3-201ENST00000428828 GLRA4Q5JXX5 417 aa12.02□□□□□ -0.49
CECR3-201ENST00000428828 SH2D4BQ5SQS7 431 aa12.02□□□□□ -0.49
CECR3-201ENST00000428828 TMEM154Q6P9G4 183 aa12.02□□□□□ -0.49
CECR3-201ENST00000428828 SLC24A5Q71RS6 500 aa12.02□□□□□ -0.49
CECR3-201ENST00000428828 INTS8Q75QN2 995 aaKnown RBP12.02□□□□□ -0.49
CECR3-201ENST00000428828 OTOP2Q7RTS6 562 aa12.02□□□□□ -0.49
CECR3-201ENST00000428828 FRMD5Q7Z6J6 570 aa12.02□□□□□ -0.49
CECR3-201ENST00000428828 ECHDC2Q86YB7 292 aa12.02□□□□□ -0.49
CECR3-201ENST00000428828 STK32AQ8WU08 396 aa12.02□□□□□ -0.49
CECR3-201ENST00000428828 TMEM174Q8WUU8 243 aa12.02□□□□□ -0.49
CECR3-201ENST00000428828 PTPRN2Q92932 1015 aa12.02□□□□□ -0.49
CECR3-201ENST00000428828 TMEM237Q96Q45 408 aa12.02□□□□□ -0.49
CECR3-201ENST00000428828 FNBP1Q96RU3 617 aa12.02□□□□□ -0.49
CECR3-201ENST00000428828 EDEM3Q9BZQ6 932 aa12.02□□□□□ -0.49
CECR3-201ENST00000428828 UBE2OQ9C0C9 1292 aaKnown RBP12.02□□□□□ -0.49
CECR3-201ENST00000428828 PIDD1Q9HB75 910 aa12.02□□□□□ -0.49
CECR3-201ENST00000428828 RXFP1Q9HBX9 757 aa12.02□□□□□ -0.49
CECR3-201ENST00000428828 METTL14Q9HCE5 456 aaKnown RBP12.02□□□□□ -0.49
CECR3-201ENST00000428828 IL23AQ9NPF7 189 aa12.02□□□□□ -0.49
CECR3-201ENST00000428828 PDP2Q9P2J9 529 aa12.02□□□□□ -0.49
CECR3-201ENST00000428828 SCOCQ9UIL1 159 aa12.02□□□□□ -0.49
CECR3-201ENST00000428828 LRCH1Q9Y2L9 728 aa12.02□□□□□ -0.49
CECR3-201ENST00000428828 USP15Q9Y4E8 981 aaPredicted RBP12.02□□□□□ -0.49
CECR3-201ENST00000428828 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.01□□□□□ -0.49
CECR3-201ENST00000428828 SSU72P8A0A1W2PR75 194 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 ESYT3A0FGR9 886 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 ZBBXA8MT70 800 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 LACTBL1A8MY62 500 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 C9IYK1 514 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 F8VZ95 297 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 ENPP3O14638 875 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 RAD51CO43502 376 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 SUN1O94901 812 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 UPP2O95045 317 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 ATF7P17544 494 aaPredicted RBP12.01□□□□□ -0.49
CECR3-201ENST00000428828 TNNI1P19237 187 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 KIF11P52732 1056 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 CYP27A1Q02318 531 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 USP4Q13107 963 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 KYAT1Q16773 422 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 SLC10A6Q3KNW5 377 aa12.01□□□□□ -0.49
CECR3-201ENST00000428828 FAM133BQ5BKY9 247 aaKnown RBP12.01□□□□□ -0.49
CECR3-201ENST00000428828 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms