RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 NRDE2Q9H7Z3 1164 aa9.57□□□□□ -0.88
NR1I3-209ENST00000428574 RC3H2Q9HBD1 1191 aaKnown RBP9.57□□□□□ -0.88
NR1I3-209ENST00000428574 IL23AQ9NPF7 189 aa9.57□□□□□ -0.88
NR1I3-209ENST00000428574 PRKAG2Q9UGJ0 569 aa9.57□□□□□ -0.88
NR1I3-209ENST00000428574 CYTH4Q9UIA0 394 aa9.57□□□□□ -0.88
NR1I3-209ENST00000428574 NME7Q9Y5B8 376 aa9.57□□□□□ -0.88
NR1I3-209ENST00000428574 PCDHA3Q9Y5H8 950 aa9.57□□□□□ -0.88
NR1I3-209ENST00000428574 TRIM43BA6NCK2 446 aa9.56□□□□□ -0.88
NR1I3-209ENST00000428574 H7C4K7 107 aa9.56□□□□□ -0.88
NR1I3-209ENST00000428574 PGRMC1O00264 195 aaKnown RBP9.56□□□□□ -0.88
NR1I3-209ENST00000428574 ENC1O14682 589 aa9.56□□□□□ -0.88
NR1I3-209ENST00000428574 NRP1O14786 923 aa9.56□□□□□ -0.88
NR1I3-209ENST00000428574 SPOPO43791 374 aa9.56□□□□□ -0.88
NR1I3-209ENST00000428574 TADA2AO75478 443 aa9.56□□□□□ -0.88
NR1I3-209ENST00000428574 TADA3O75528 432 aa9.56□□□□□ -0.88
NR1I3-209ENST00000428574 EFEMP2O95967 443 aa9.56□□□□□ -0.88
NR1I3-209ENST00000428574 LAG3P18627 525 aa9.56□□□□□ -0.88
NR1I3-209ENST00000428574 FGFR3P22607 806 aa9.56□□□□□ -0.88
NR1I3-209ENST00000428574 LMO2P25791 158 aa9.56□□□□□ -0.88
NR1I3-209ENST00000428574 PCK1P35558 622 aa9.56□□□□□ -0.88
NR1I3-209ENST00000428574 PPM1AP35813 382 aa9.56□□□□□ -0.88
NR1I3-209ENST00000428574 MAGEA11P43364 429 aa9.56□□□□□ -0.88
NR1I3-209ENST00000428574 OR1G1P47890 313 aa9.56□□□□□ -0.88
NR1I3-209ENST00000428574 VASPP50552 380 aaPredicted RBP9.56□□□□□ -0.88
NR1I3-209ENST00000428574 PDE4CQ08493 712 aa9.56□□□□□ -0.88
NR1I3-209ENST00000428574 MRPL58Q14197 206 aaKnown RBP9.56□□□□□ -0.88
NR1I3-209ENST00000428574 EFHC1Q5JVL4 640 aa9.56□□□□□ -0.88
NR1I3-209ENST00000428574 CCDC181Q5TID7 509 aa9.56□□□□□ -0.88
NR1I3-209ENST00000428574 ZNF280DQ6N043 979 aa9.56□□□□□ -0.88
NR1I3-209ENST00000428574 PSRC1Q6PGN9 363 aaPredicted RBP9.56□□□□□ -0.88
NR1I3-209ENST00000428574 DCUN1D2Q6PH85 259 aa9.56□□□□□ -0.88
NR1I3-209ENST00000428574 ANKS3Q6ZW76 656 aa9.56□□□□□ -0.88
NR1I3-209ENST00000428574 BEND5Q7L4P6 421 aa9.56□□□□□ -0.88
NR1I3-209ENST00000428574 FAM35AQ86V20 835 aa9.56□□□□□ -0.88
NR1I3-209ENST00000428574 VSIG1Q86XK7 387 aa9.56□□□□□ -0.88
NR1I3-209ENST00000428574 C12orf29Q8N999 325 aa9.56□□□□□ -0.88
NR1I3-209ENST00000428574 SLC2A14Q8TDB8 520 aa9.56□□□□□ -0.88
NR1I3-209ENST00000428574 MAIP1Q8WWC4 291 aa9.56□□□□□ -0.88
NR1I3-209ENST00000428574 IRGQQ8WZA9 623 aa9.56□□□□□ -0.88
NR1I3-209ENST00000428574 GOLGA1Q92805 767 aa9.56□□□□□ -0.88
NR1I3-209ENST00000428574 TRIM43Q96BQ3 446 aaPredicted RBP9.56□□□□□ -0.88
NR1I3-209ENST00000428574 PAAF1Q9BRP4 392 aa9.56□□□□□ -0.88
NR1I3-209ENST00000428574 CNPY3Q9BT09 278 aa9.56□□□□□ -0.88
NR1I3-209ENST00000428574 DPEP3Q9H4B8 488 aa9.56□□□□□ -0.88
NR1I3-209ENST00000428574 FAM49BQ9NUQ9 324 aa9.56□□□□□ -0.88
NR1I3-209ENST00000428574 RRN3Q9NYV6 651 aa9.56□□□□□ -0.88
NR1I3-209ENST00000428574 HSFX1Q9UBD0 423 aa9.56□□□□□ -0.88
NR1I3-209ENST00000428574 FAN1Q9Y2M0 1017 aa9.56□□□□□ -0.88
NR1I3-209ENST00000428574 MICAL3Q7RTP6 2002 aa9.56□□□□□ -0.88
NR1I3-209ENST00000428574 PCNTO95613 3336 aa9.56□□□□□ -0.88
NR1I3-209ENST00000428574 TBKBP1A7MCY6 615 aa9.55□□□□□ -0.88
NR1I3-209ENST00000428574 ZNF487B1APH4 448 aa9.55□□□□□ -0.88
NR1I3-209ENST00000428574 E5RJQ4 531 aa9.55□□□□□ -0.88
NR1I3-209ENST00000428574 CCDC188H7C350 402 aa9.55□□□□□ -0.88
NR1I3-209ENST00000428574 DYNC1I1O14576 645 aa9.55□□□□□ -0.88
NR1I3-209ENST00000428574 KCNK3O14649 394 aa9.55□□□□□ -0.88
NR1I3-209ENST00000428574 DDX3YO15523 660 aaKnown RBP9.55□□□□□ -0.88
NR1I3-209ENST00000428574 ATMINO43313 823 aaPredicted RBP9.55□□□□□ -0.88
NR1I3-209ENST00000428574 CALCAP01258 141 aa9.55□□□□□ -0.88
NR1I3-209ENST00000428574 GALTP07902 379 aa9.55□□□□□ -0.88
NR1I3-209ENST00000428574 PDGFRBP09619 1106 aa9.55□□□□□ -0.88
NR1I3-209ENST00000428574 COMTP21964 271 aa9.55□□□□□ -0.88
NR1I3-209ENST00000428574 PTPN7P35236 360 aa9.55□□□□□ -0.88
NR1I3-209ENST00000428574 CETN2P41208 172 aa9.55□□□□□ -0.88
NR1I3-209ENST00000428574 PTPN9P43378 593 aa9.55□□□□□ -0.88
NR1I3-209ENST00000428574 ALDH7A1P49419 539 aaKnown RBP9.55□□□□□ -0.88
NR1I3-209ENST00000428574 PEX5P50542 639 aa9.55□□□□□ -0.88
NR1I3-209ENST00000428574 ZNF143P52747 638 aaPredicted RBP9.55□□□□□ -0.88
NR1I3-209ENST00000428574 RWDD2BP57060 319 aa9.55□□□□□ -0.88
NR1I3-209ENST00000428574 COPS2P61201 443 aa9.55□□□□□ -0.88
NR1I3-209ENST00000428574 WDR5P61964 334 aaKnown RBP9.55□□□□□ -0.88
NR1I3-209ENST00000428574 SLC6A3Q01959 620 aa9.55□□□□□ -0.88
NR1I3-209ENST00000428574 ORC1Q13415 861 aa9.55□□□□□ -0.88
NR1I3-209ENST00000428574 MESDQ14696 234 aa9.55□□□□□ -0.88
NR1I3-209ENST00000428574 HADHQ16836 314 aaKnown RBP9.55□□□□□ -0.88
NR1I3-209ENST00000428574 TCTN1Q2MV58 587 aa9.55□□□□□ -0.88
NR1I3-209ENST00000428574 GLE1Q53GS7 698 aaKnown RBP9.55□□□□□ -0.88
NR1I3-209ENST00000428574 MDH1BQ5I0G3 518 aa9.55□□□□□ -0.88
NR1I3-209ENST00000428574 RAB41Q5JT25 222 aa9.55□□□□□ -0.88
NR1I3-209ENST00000428574 PMF1Q6P1K2 205 aa9.55□□□□□ -0.88
NR1I3-209ENST00000428574 OLFML1Q6UWY5 402 aa9.55□□□□□ -0.88
NR1I3-209ENST00000428574 VSTM1Q6UX27 236 aa9.55□□□□□ -0.88
NR1I3-209ENST00000428574 RSRC2Q7L4I2 434 aaKnown RBP9.55□□□□□ -0.88
NR1I3-209ENST00000428574 DEFB128Q7Z7B8 93 aa9.55□□□□□ -0.88
NR1I3-209ENST00000428574 RHOT1Q8IXI2 618 aa9.55□□□□□ -0.88
NR1I3-209ENST00000428574 KATNAL2Q8IYT4 538 aa9.55□□□□□ -0.88
NR1I3-209ENST00000428574 RNF168Q8IYW5 571 aaPredicted RBP9.55□□□□□ -0.88
NR1I3-209ENST00000428574 TMEM130Q8N3G9 435 aa9.55□□□□□ -0.88
NR1I3-209ENST00000428574 RABGGTAQ92696 567 aa9.55□□□□□ -0.88
NR1I3-209ENST00000428574 MCEEQ96PE7 176 aa9.55□□□□□ -0.88
NR1I3-209ENST00000428574 RTP3Q9BQQ7 232 aa9.55□□□□□ -0.88
NR1I3-209ENST00000428574 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.55□□□□□ -0.88
NR1I3-209ENST00000428574 HTATIP2Q9BUP3 242 aa9.55□□□□□ -0.88
NR1I3-209ENST00000428574 ZCWPW1Q9H0M4 648 aa9.55□□□□□ -0.88
NR1I3-209ENST00000428574 MTIF3Q9H2K0 278 aaKnown RBP9.55□□□□□ -0.88
NR1I3-209ENST00000428574 DMAP1Q9NPF5 467 aaPredicted RBP9.55□□□□□ -0.88
NR1I3-209ENST00000428574 CRTAC1Q9NQ79 661 aa9.55□□□□□ -0.88
NR1I3-209ENST00000428574 CNGB3Q9NQW8 809 aa9.55□□□□□ -0.88
NR1I3-209ENST00000428574 DDX56Q9NY93 547 aaKnown RBP9.55□□□□□ -0.88
NR1I3-209ENST00000428574 TMEM59LQ9UK28 342 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms