RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 DCLK3Q9C098 648 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 GRIP2Q9C0E4 1043 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 RPAP3Q9H6T3 665 aaPredicted RBP5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 LRRC19Q9H756 370 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 RMND5AQ9H871 391 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 MANSC1Q9H8J5 431 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 PNPLA3Q9NST1 481 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 GJB4Q9NTQ9 266 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 TRNAU1APQ9NX07 287 aaKnown RBP5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 TAS2R1Q9NYW7 299 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 GMPR2Q9P2T1 348 aaKnown RBP5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 APPL1Q9UKG1 709 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 PRPF19Q9UMS4 504 aaKnown RBP5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 PSMD13Q9UNM6 376 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 TACC3Q9Y6A5 838 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 HEG1Q9ULI3 1381 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 SF3B1O75533 1304 aaKnown RBP eCLIP5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 ARHGAP42A6NI28 874 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 LRRIQ4A6NIV6 560 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 B8ZZF3 427 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 H3BRJ5 948 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 RNF103O00237 685 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 TRAF5O00463 557 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 BUD23O43709 281 aaKnown RBP5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 TSPAN1O60635 241 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 SNAP91O60641 907 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 GUCY1B2O75343 617 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 TRPA1O75762 1119 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 TSPAN9O75954 239 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 TOMM70O94826 608 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 FKBP9O95302 570 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 PGM3O95394 542 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 CHEK2O96017 543 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 SMIM18P0DKX4 95 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 EEF2P13639 858 aaKnown RBP5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 AOC1P19801 751 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 SLC5A2P31639 672 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 MCM7P33993 719 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 ADD2P35612 726 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 PTGIRP43119 386 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 ALDH1A3P47895 512 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 SERPINB10P48595 397 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 BLVRAP53004 296 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 COPAP53621 1224 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 NLRP11P59045 1033 aaKnown RBP5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 GNG2P59768 71 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 SH3BP2P78314 561 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 BNC1Q01954 994 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 HSPA14Q0VDF9 509 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 CETN1Q12798 172 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 E2F2Q14209 437 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 DLGAP5Q15398 846 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 TGFBIQ15582 683 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 TRADDQ15628 312 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 PHKG1Q16816 387 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 EXOC3L4Q17RC7 722 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 CWF19L2Q2TBE0 894 aaKnown RBP5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 ZNF568Q3ZCX4 644 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 ZBED5Q49AG3 693 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 ZC2HC1CQ53FD0 456 aaPredicted RBP5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 CAVIN4Q5BKX8 364 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 ESCO1Q5FWF5 840 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 MEX3CQ5U5Q3 659 aaKnown RBP5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 SPOPLQ6IQ16 392 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 RFWD3Q6PCD5 774 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 OTOAQ7RTW8 1153 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 KRT25Q7Z3Z0 450 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 TMC7Q7Z402 723 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 NOP9Q86U38 636 aaKnown RBP5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 KBTBD2Q8IY47 623 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 CENPSQ8N2Z9 138 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 TMCO5AQ8N6Q1 288 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 GOLM1Q8NBJ4 401 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 DAGLBQ8NCG7 672 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 IL17REQ8NFR9 667 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 SLC26A7Q8TE54 656 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 DENND1AQ8TEH3 1009 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 U2AF1L4Q8WU68 220 aaKnown RBP5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 TTC9Q92623 222 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 DPF3Q92784 378 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 HPS1Q92902 700 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 RMND5BQ96G75 393 aaPredicted RBP5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 BCL7BQ9BQE9 202 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 ZSWIM1Q9BR11 485 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 YTHDF1Q9BYJ9 559 aaKnown RBP5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 CELF4Q9BZC1 486 aaKnown RBP5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 SHCBP1LQ9BZQ2 653 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 OR2B2Q9GZK3 357 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 SENP6Q9GZR1 1112 aaPredicted RBP5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 PAIP1Q9H074 479 aaKnown RBP5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 CPNE5Q9HCH3 593 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 HOXC10Q9NYD6 342 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 ZMAT5Q9UDW3 170 aaKnown RBP5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 PCSK1NQ9UHG2 260 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 ATPIF1Q9UII2 106 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 ITGA11Q9UKX5 1188 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 NAALADL1Q9UQQ1 740 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 ERGIC3Q9Y282 383 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 WBP11Q9Y2W2 641 aaKnown RBP5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 NEU2Q9Y3R4 380 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms