RNA–Protein interactions for RNA: ENST00000427487.5

HDLBP-215, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 924 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-215ENST00000427487 KCTD13Q8WZ19 329 aa12.76□□□□□ -0.37
HDLBP-215ENST00000427487 CALR3Q96L12 384 aaKnown RBP12.76□□□□□ -0.37
HDLBP-215ENST00000427487 C8orf48Q96LL4 319 aa12.76□□□□□ -0.37
HDLBP-215ENST00000427487 CDCA3Q99618 268 aaPredicted RBP12.76□□□□□ -0.37
HDLBP-215ENST00000427487 TCF25Q9BQ70 676 aa12.76□□□□□ -0.37
HDLBP-215ENST00000427487 ALG13Q9NP73 1137 aaKnown RBP12.76□□□□□ -0.37
HDLBP-215ENST00000427487 ENTPD7Q9NQZ7 604 aa12.76□□□□□ -0.37
HDLBP-215ENST00000427487 KCND1Q9NSA2 647 aa12.76□□□□□ -0.37
HDLBP-215ENST00000427487 COMMD8Q9NX08 183 aa12.76□□□□□ -0.37
HDLBP-215ENST00000427487 WDR27A2RRH5 827 aa12.75□□□□□ -0.37
HDLBP-215ENST00000427487 MTMR11A4FU01 709 aa12.75□□□□□ -0.37
HDLBP-215ENST00000427487 ANKRD62A6NC57 917 aa12.75□□□□□ -0.37
HDLBP-215ENST00000427487 SOWAHDA6NJG2 315 aa12.75□□□□□ -0.37
HDLBP-215ENST00000427487 M0QYV0 167 aa12.75□□□□□ -0.37
HDLBP-215ENST00000427487 GRM6O15303 877 aa12.75□□□□□ -0.37
HDLBP-215ENST00000427487 TEX28O15482 410 aa12.75□□□□□ -0.37
HDLBP-215ENST00000427487 HCRTO43612 131 aa12.75□□□□□ -0.37
HDLBP-215ENST00000427487 CPB1P15086 417 aa12.75□□□□□ -0.37
HDLBP-215ENST00000427487 MMP8P22894 467 aa12.75□□□□□ -0.37
HDLBP-215ENST00000427487 OR1D2P34982 312 aa12.75□□□□□ -0.37
HDLBP-215ENST00000427487 SCNN1AP37088 669 aa12.75□□□□□ -0.37
HDLBP-215ENST00000427487 NSFP46459 744 aaKnown RBP12.75□□□□□ -0.37
HDLBP-215ENST00000427487 GABRB2P47870 512 aa12.75□□□□□ -0.37
HDLBP-215ENST00000427487 ERVFC1P60507 584 aa12.75□□□□□ -0.37
HDLBP-215ENST00000427487 RPL10AP62906 217 aaKnown RBP12.75□□□□□ -0.37
HDLBP-215ENST00000427487 GOLGA7BQ2TAP0 167 aa12.75□□□□□ -0.37
HDLBP-215ENST00000427487 TAF3Q5VWG9 929 aa12.75□□□□□ -0.37
HDLBP-215ENST00000427487 GPR153Q6NV75 609 aa12.75□□□□□ -0.37
HDLBP-215ENST00000427487 LILRA6Q6PI73 481 aa12.75□□□□□ -0.37
HDLBP-215ENST00000427487 PRSS55Q6UWB4 352 aaPredicted RBP12.75□□□□□ -0.37
HDLBP-215ENST00000427487 RSPO2Q6UXX9 243 aaPredicted RBP12.75□□□□□ -0.37
HDLBP-215ENST00000427487 RAD9BQ6WBX8 426 aa12.75□□□□□ -0.37
HDLBP-215ENST00000427487 CLEC20AQ6ZU45 233 aa12.75□□□□□ -0.37
HDLBP-215ENST00000427487 TMEM110Q86TL2 294 aa12.75□□□□□ -0.37
HDLBP-215ENST00000427487 TCEAL8Q8IYN2 117 aa12.75□□□□□ -0.37
HDLBP-215ENST00000427487 PPP2R3CQ969Q6 453 aa12.75□□□□□ -0.37
HDLBP-215ENST00000427487 TRIM44Q96DX7 344 aaPredicted RBP12.75□□□□□ -0.37
HDLBP-215ENST00000427487 SPATA17Q96L03 361 aa12.75□□□□□ -0.37
HDLBP-215ENST00000427487 B3GALT6Q96L58 329 aa12.75□□□□□ -0.37
HDLBP-215ENST00000427487 KLHL5Q96PQ7 755 aa12.75□□□□□ -0.37
HDLBP-215ENST00000427487 TMEM209Q96SK2 561 aa12.75□□□□□ -0.37
HDLBP-215ENST00000427487 PCDHB18PQ96TA0 734 aa12.75□□□□□ -0.37
HDLBP-215ENST00000427487 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.75□□□□□ -0.37
HDLBP-215ENST00000427487 SLC4A5Q9BY07 1137 aa12.75□□□□□ -0.37
HDLBP-215ENST00000427487 KCNF1Q9H3M0 494 aa12.75□□□□□ -0.37
HDLBP-215ENST00000427487 DMAP1Q9NPF5 467 aaPredicted RBP12.75□□□□□ -0.37
HDLBP-215ENST00000427487 FAM49BQ9NUQ9 324 aa12.75□□□□□ -0.37
HDLBP-215ENST00000427487 TMLHEQ9NVH6 421 aa12.75□□□□□ -0.37
HDLBP-215ENST00000427487 EHD2Q9NZN4 543 aa12.75□□□□□ -0.37
HDLBP-215ENST00000427487 WDR35Q9P2L0 1181 aa12.75□□□□□ -0.37
HDLBP-215ENST00000427487 STRIP2Q9ULQ0 834 aa12.75□□□□□ -0.37
HDLBP-215ENST00000427487 LAMA2P24043 3122 aaKnown RBP12.74□□□□□ -0.37
HDLBP-215ENST00000427487 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.74□□□□□ -0.37
HDLBP-215ENST00000427487 BTNL10A8MVZ5 291 aa12.74□□□□□ -0.37
HDLBP-215ENST00000427487 CCP110O43303 1012 aa12.74□□□□□ -0.37
HDLBP-215ENST00000427487 AP1G2O75843 785 aa12.74□□□□□ -0.37
HDLBP-215ENST00000427487 PAPLNO95428 1278 aa12.74□□□□□ -0.37
HDLBP-215ENST00000427487 CALB1P05937 261 aa12.74□□□□□ -0.37
HDLBP-215ENST00000427487 POU2F2P09086 479 aa12.74□□□□□ -0.37
HDLBP-215ENST00000427487 CNPP09543 421 aaKnown RBP12.74□□□□□ -0.37
HDLBP-215ENST00000427487 CCDC130P13994 396 aa12.74□□□□□ -0.37
HDLBP-215ENST00000427487 POU3F3P20264 500 aaPredicted RBP12.74□□□□□ -0.37
HDLBP-215ENST00000427487 DNAJB1P25685 340 aa12.74□□□□□ -0.37
HDLBP-215ENST00000427487 CYP27A1Q02318 531 aa12.74□□□□□ -0.37
HDLBP-215ENST00000427487 PDCLQ13371 301 aa12.74□□□□□ -0.37
HDLBP-215ENST00000427487 PLD1Q13393 1074 aa12.74□□□□□ -0.37
HDLBP-215ENST00000427487 ORC1Q13415 861 aa12.74□□□□□ -0.37
HDLBP-215ENST00000427487 TCEAL1Q15170 157 aa12.74□□□□□ -0.37
HDLBP-215ENST00000427487 RAB41Q5JT25 222 aa12.74□□□□□ -0.37
HDLBP-215ENST00000427487 CCDC122Q5T0U0 273 aa12.74□□□□□ -0.37
HDLBP-215ENST00000427487 DENND1BQ6P3S1 775 aa12.74□□□□□ -0.37
HDLBP-215ENST00000427487 ELMSAN1Q6PJG2 1045 aa12.74□□□□□ -0.37
HDLBP-215ENST00000427487 WDTC1Q8N5D0 677 aa12.74□□□□□ -0.37
HDLBP-215ENST00000427487 C1orf131Q8NDD1 294 aaKnown RBP12.74□□□□□ -0.37
HDLBP-215ENST00000427487 UBE2Q2Q8WVN8 375 aa12.74□□□□□ -0.37
HDLBP-215ENST00000427487 MRPL38Q96DV4 380 aaKnown RBP12.74□□□□□ -0.37
HDLBP-215ENST00000427487 MED10Q9BTT4 135 aa12.74□□□□□ -0.37
HDLBP-215ENST00000427487 PLEKHA4Q9H4M7 779 aa12.74□□□□□ -0.37
HDLBP-215ENST00000427487 ZNF576Q9H609 170 aa12.74□□□□□ -0.37
HDLBP-215ENST00000427487 AVENQ9NQS1 362 aaPredicted RBP12.74□□□□□ -0.37
HDLBP-215ENST00000427487 KRT82Q9NSB4 513 aa12.74□□□□□ -0.37
HDLBP-215ENST00000427487 IL37Q9NZH6 218 aa12.74□□□□□ -0.37
HDLBP-215ENST00000427487 COLQQ9Y215 455 aaPredicted RBP12.74□□□□□ -0.37
HDLBP-215ENST00000427487 ADGRG1Q9Y653 693 aa12.74□□□□□ -0.37
HDLBP-215ENST00000427487 NCANO14594 1321 aa12.73□□□□□ -0.37
HDLBP-215ENST00000427487 A0A0A6YYK5 440 aaPredicted RBP12.73□□□□□ -0.37
HDLBP-215ENST00000427487 C2CD2LO14523 706 aa12.73□□□□□ -0.37
HDLBP-215ENST00000427487 PJA2O43164 708 aa12.73□□□□□ -0.37
HDLBP-215ENST00000427487 ADAM12O43184 909 aa12.73□□□□□ -0.37
HDLBP-215ENST00000427487 SART1O43290 800 aaKnown RBP12.73□□□□□ -0.37
HDLBP-215ENST00000427487 FBXO21O94952 628 aa12.73□□□□□ -0.37
HDLBP-215ENST00000427487 FTLP02792 175 aaPredicted RBP12.73□□□□□ -0.37
HDLBP-215ENST00000427487 H2AFZP0C0S5 128 aa12.73□□□□□ -0.37
HDLBP-215ENST00000427487 CCDC175P0C221 793 aa12.73□□□□□ -0.37
HDLBP-215ENST00000427487 HAPLN1P10915 354 aaPredicted RBP12.73□□□□□ -0.37
HDLBP-215ENST00000427487 BDNFP23560 247 aa12.73□□□□□ -0.37
HDLBP-215ENST00000427487 HOXA9P31269 272 aa12.73□□□□□ -0.37
HDLBP-215ENST00000427487 GFPT1Q06210 699 aaPredicted RBP12.73□□□□□ -0.37
HDLBP-215ENST00000427487 PDE4CQ08493 712 aa12.73□□□□□ -0.37
HDLBP-215ENST00000427487 ZNF268Q14587 947 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms