RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 RCOR2Q8IZ40 523 aa28.02■■■□□ 2.08
SH3GL3-202ENST00000427482 PGBD4Q96DM1 585 aa28.02■■■□□ 2.08
SH3GL3-202ENST00000427482 RBM41Q96IZ5 413 aaKnown RBP28.02■■■□□ 2.08
SH3GL3-202ENST00000427482 HPCAL4Q9UM19 191 aa28.02■■■□□ 2.08
SH3GL3-202ENST00000427482 PHF24Q9UPV7 400 aa28.02■■■□□ 2.08
SH3GL3-202ENST00000427482 RALAP11233 206 aa28.01■■■□□ 2.07
SH3GL3-202ENST00000427482 SKIP12755 728 aa28.01■■■□□ 2.07
SH3GL3-202ENST00000427482 RPL9P32969 192 aaKnown RBP28.01■■■□□ 2.07
SH3GL3-202ENST00000427482 CBX1P83916 185 aa28.01■■■□□ 2.07
SH3GL3-202ENST00000427482 KLF1Q13351 362 aaPredicted RBP28.01■■■□□ 2.07
SH3GL3-202ENST00000427482 ATP13A4Q4VNC1 1196 aa28.01■■■□□ 2.07
SH3GL3-202ENST00000427482 POLNQ7Z5Q5 900 aa28.01■■■□□ 2.07
SH3GL3-202ENST00000427482 TMEM110Q86TL2 294 aa28.01■■■□□ 2.07
SH3GL3-202ENST00000427482 ANKRD52Q8NB46 1076 aa28.01■■■□□ 2.07
SH3GL3-202ENST00000427482 OSBPL8Q9BZF1 889 aa28.01■■■□□ 2.07
SH3GL3-202ENST00000427482 DDX56Q9NY93 547 aaKnown RBP28.01■■■□□ 2.07
SH3GL3-202ENST00000427482 TSC2P49815 1807 aa28■■■□□ 2.07
SH3GL3-202ENST00000427482 PIK3R2O00459 728 aa28■■■□□ 2.07
SH3GL3-202ENST00000427482 LRCH4O75427 683 aa28■■■□□ 2.07
SH3GL3-202ENST00000427482 KRT1P04264 644 aa28■■■□□ 2.07
SH3GL3-202ENST00000427482 BCAT1P54687 386 aa28■■■□□ 2.07
SH3GL3-202ENST00000427482 BST2Q10589 180 aaKnown RBP28■■■□□ 2.07
SH3GL3-202ENST00000427482 DDX42Q86XP3 938 aaKnown RBP eCLIP28■■■□□ 2.07
SH3GL3-202ENST00000427482 ARFGAP1Q8N6T3 406 aa28■■■□□ 2.07
SH3GL3-202ENST00000427482 RNF169Q8NCN4 708 aa28■■■□□ 2.07
SH3GL3-202ENST00000427482 SENP8Q96LD8 212 aa28■■■□□ 2.07
SH3GL3-202ENST00000427482 SLITRK1Q96PX8 696 aa28■■■□□ 2.07
SH3GL3-202ENST00000427482 XRN2Q9H0D6 950 aaKnown RBP eCLIP28■■■□□ 2.07
SH3GL3-202ENST00000427482 FAM114A2Q9NRY5 505 aa28■■■□□ 2.07
SH3GL3-202ENST00000427482 KLHL11Q9NVR0 708 aa28■■■□□ 2.07
SH3GL3-202ENST00000427482 RASAL2Q9UJF2 1139 aa28■■■□□ 2.07
SH3GL3-202ENST00000427482 GABRDO14764 452 aa27.99■■■□□ 2.07
SH3GL3-202ENST00000427482 DAPK3O43293 454 aa27.99■■■□□ 2.07
SH3GL3-202ENST00000427482 ADORA2BP29275 332 aa27.99■■■□□ 2.07
SH3GL3-202ENST00000427482 SLC25A11Q02978 314 aaKnown RBP27.99■■■□□ 2.07
SH3GL3-202ENST00000427482 SMC1AQ14683 1233 aaKnown RBP27.99■■■□□ 2.07
SH3GL3-202ENST00000427482 ACAP1Q15027 740 aa27.99■■■□□ 2.07
SH3GL3-202ENST00000427482 WSCD1Q658N2 575 aa27.99■■■□□ 2.07
SH3GL3-202ENST00000427482 TXNRD3NBQ6F5E7 133 aa27.99■■■□□ 2.07
SH3GL3-202ENST00000427482 ANKS1BQ7Z6G8 1248 aa27.99■■■□□ 2.07
SH3GL3-202ENST00000427482 B3GALNT2Q8NCR0 500 aa27.99■■■□□ 2.07
SH3GL3-202ENST00000427482 ERP44Q9BS26 406 aa27.99■■■□□ 2.07
SH3GL3-202ENST00000427482 ACBD3Q9H3P7 528 aa27.99■■■□□ 2.07
SH3GL3-202ENST00000427482 UBN1Q9NPG3 1134 aa27.99■■■□□ 2.07
SH3GL3-202ENST00000427482 TRIM17Q9Y577 477 aa27.99■■■□□ 2.07
SH3GL3-202ENST00000427482 ARVCFO00192 962 aa27.99■■■□□ 2.07
SH3GL3-202ENST00000427482 FAM153BP0C7A2 387 aa27.99■■■□□ 2.07
SH3GL3-202ENST00000427482 CETN2P41208 172 aa27.99■■■□□ 2.07
SH3GL3-202ENST00000427482 SNX16P57768 344 aa27.99■■■□□ 2.07
SH3GL3-202ENST00000427482 HLTFQ14527 1009 aaKnown RBP eCLIP27.99■■■□□ 2.07
SH3GL3-202ENST00000427482 FAM153CQ494X1 144 aa27.99■■■□□ 2.07
SH3GL3-202ENST00000427482 DUPD1Q68J44 220 aa27.99■■■□□ 2.07
SH3GL3-202ENST00000427482 OLFML1Q6UWY5 402 aa27.99■■■□□ 2.07
SH3GL3-202ENST00000427482 RNF25Q96BH1 459 aaPredicted RBP27.99■■■□□ 2.07
SH3GL3-202ENST00000427482 PIWIL1Q96J94 861 aaKnown RBP27.99■■■□□ 2.07
SH3GL3-202ENST00000427482 FAM153AQ9UHL3 310 aa27.99■■■□□ 2.07
SH3GL3-202ENST00000427482 KBTBD13C9JR72 458 aa27.98■■■□□ 2.07
SH3GL3-202ENST00000427482 GABBR2O75899 941 aa27.98■■■□□ 2.07
SH3GL3-202ENST00000427482 ZNF143P52747 638 aaPredicted RBP27.98■■■□□ 2.07
SH3GL3-202ENST00000427482 MBTPS1Q14703 1052 aa27.98■■■□□ 2.07
SH3GL3-202ENST00000427482 ZNF598Q86UK7 904 aaKnown RBP27.98■■■□□ 2.07
SH3GL3-202ENST00000427482 ECHDC2Q86YB7 292 aa27.98■■■□□ 2.07
SH3GL3-202ENST00000427482 C3orf58Q8NDZ4 430 aa27.98■■■□□ 2.07
SH3GL3-202ENST00000427482 SLC2A14Q8TDB8 520 aa27.98■■■□□ 2.07
SH3GL3-202ENST00000427482 HEMGNQ9BXL5 484 aa27.98■■■□□ 2.07
SH3GL3-202ENST00000427482 CASTOR2A6NHX0 329 aa27.97■■■□□ 2.07
SH3GL3-202ENST00000427482 C2CD4BA6NLJ0 364 aa27.97■■■□□ 2.07
SH3GL3-202ENST00000427482 GPD1P21695 349 aa27.97■■■□□ 2.07
SH3GL3-202ENST00000427482 PTPN7P35236 360 aa27.97■■■□□ 2.07
SH3GL3-202ENST00000427482 RPL34P49207 117 aaKnown RBP27.97■■■□□ 2.07
SH3GL3-202ENST00000427482 COPS2P61201 443 aa27.97■■■□□ 2.07
SH3GL3-202ENST00000427482 UPP1Q16831 310 aa27.97■■■□□ 2.07
SH3GL3-202ENST00000427482 KCTD19Q17RG1 926 aaPredicted RBP27.97■■■□□ 2.07
SH3GL3-202ENST00000427482 TMEM86AQ8N2M4 240 aa27.97■■■□□ 2.07
SH3GL3-202ENST00000427482 C1orf54Q8WWF1 131 aa27.97■■■□□ 2.07
SH3GL3-202ENST00000427482 SLCO2A1Q92959 643 aa27.97■■■□□ 2.07
SH3GL3-202ENST00000427482 DPH5Q9H2P9 285 aa27.97■■■□□ 2.07
SH3GL3-202ENST00000427482 CYLDQ9NQC7 956 aa27.97■■■□□ 2.07
SH3GL3-202ENST00000427482 PI4K2BG5E9Z4 385 aa27.97■■■□□ 2.07
SH3GL3-202ENST00000427482 AARSP49588 968 aaKnown RBP eCLIP27.97■■■□□ 2.07
SH3GL3-202ENST00000427482 GRIK3Q13003 919 aa27.97■■■□□ 2.07
SH3GL3-202ENST00000427482 HADHQ16836 314 aaKnown RBP27.97■■■□□ 2.07
SH3GL3-202ENST00000427482 ZFYVE27Q5T4F4 411 aa27.97■■■□□ 2.07
SH3GL3-202ENST00000427482 TRNP1Q6NT89 227 aa27.97■■■□□ 2.07
SH3GL3-202ENST00000427482 MFSD7Q6UXD7 560 aa27.97■■■□□ 2.07
SH3GL3-202ENST00000427482 ZDHHC17Q8IUH5 632 aa27.97■■■□□ 2.07
SH3GL3-202ENST00000427482 CCDC105Q8IYK2 499 aa27.97■■■□□ 2.07
SH3GL3-202ENST00000427482 SH3TC2Q8TF17 1288 aa27.97■■■□□ 2.07
SH3GL3-202ENST00000427482 HNRNPABQ99729 332 aaKnown RBP27.97■■■□□ 2.07
SH3GL3-202ENST00000427482 DCLK3Q9C098 648 aa27.97■■■□□ 2.07
SH3GL3-202ENST00000427482 ASNSD1Q9NWL6 643 aa27.97■■■□□ 2.07
SH3GL3-202ENST00000427482 PAPSS1O43252 624 aaPredicted RBP27.96■■■□□ 2.07
SH3GL3-202ENST00000427482 CAPN15O75808 1086 aa27.96■■■□□ 2.07
SH3GL3-202ENST00000427482 POMCP01189 267 aa27.96■■■□□ 2.07
SH3GL3-202ENST00000427482 KRT7P08729 469 aa27.96■■■□□ 2.07
SH3GL3-202ENST00000427482 IBSPP21815 317 aaPredicted RBP27.96■■■□□ 2.07
SH3GL3-202ENST00000427482 TKTP29401 623 aaKnown RBP27.96■■■□□ 2.07
SH3GL3-202ENST00000427482 SLC6A3Q01959 620 aa27.96■■■□□ 2.07
SH3GL3-202ENST00000427482 GPS2Q13227 327 aa27.96■■■□□ 2.07
SH3GL3-202ENST00000427482 SPOCD1Q6ZMY3 1216 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms