RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 DDX46Q7L014 1031 aaKnown RBP6.65□□□□□ -1.34
C9orf3-205ENST00000427193 UBE3BQ7Z3V4 1068 aa6.65□□□□□ -1.34
C9orf3-205ENST00000427193 RNF180Q86T96 592 aa6.65□□□□□ -1.34
C9orf3-205ENST00000427193 MAPKAPK5Q8IW41 473 aa6.65□□□□□ -1.34
C9orf3-205ENST00000427193 AUTS2Q8WXX7 1259 aa6.65□□□□□ -1.34
C9orf3-205ENST00000427193 NELL1Q92832 810 aa6.65□□□□□ -1.34
C9orf3-205ENST00000427193 REXO4Q9GZR2 422 aaKnown RBP6.65□□□□□ -1.34
C9orf3-205ENST00000427193 PRDM13Q9H4Q3 707 aa6.65□□□□□ -1.34
C9orf3-205ENST00000427193 DCTPP1Q9H773 170 aa6.65□□□□□ -1.34
C9orf3-205ENST00000427193 KLHL11Q9NVR0 708 aa6.65□□□□□ -1.34
C9orf3-205ENST00000427193 RNF186Q9NXI6 227 aa6.65□□□□□ -1.34
C9orf3-205ENST00000427193 EDARQ9UNE0 448 aa6.65□□□□□ -1.34
C9orf3-205ENST00000427193 NIP7Q9Y221 180 aaKnown RBP eCLIP6.65□□□□□ -1.34
C9orf3-205ENST00000427193 ATRNL1Q5VV63 1379 aa6.65□□□□□ -1.35
C9orf3-205ENST00000427193 ABCC12Q96J65 1359 aa6.65□□□□□ -1.35
C9orf3-205ENST00000427193 UNC80Q8N2C7 3258 aa6.65□□□□□ -1.35
C9orf3-205ENST00000427193 COL11A2P13942 1736 aaPredicted RBP6.64□□□□□ -1.35
C9orf3-205ENST00000427193 MTHFD2P13995 350 aa6.64□□□□□ -1.35
C9orf3-205ENST00000427193 IARSP41252 1262 aaKnown RBP6.64□□□□□ -1.35
C9orf3-205ENST00000427193 ID4P47928 161 aa6.64□□□□□ -1.35
C9orf3-205ENST00000427193 Q6ZVL8 140 aa6.64□□□□□ -1.35
C9orf3-205ENST00000427193 PPP1R42Q7Z4L9 355 aa6.64□□□□□ -1.35
C9orf3-205ENST00000427193 TMEM132CQ8N3T6 1108 aa6.64□□□□□ -1.35
C9orf3-205ENST00000427193 SIMC1Q8NDZ2 872 aa6.64□□□□□ -1.35
C9orf3-205ENST00000427193 FATE1Q969F0 183 aa6.64□□□□□ -1.35
C9orf3-205ENST00000427193 FUBP1Q96AE4 644 aaKnown RBP6.64□□□□□ -1.35
C9orf3-205ENST00000427193 MASTLQ96GX5 879 aa6.64□□□□□ -1.35
C9orf3-205ENST00000427193 FUBP3Q96I24 572 aaKnown RBP eCLIP6.64□□□□□ -1.35
C9orf3-205ENST00000427193 UTP14AQ9BVJ6 771 aaKnown RBP6.64□□□□□ -1.35
C9orf3-205ENST00000427193 BICC1Q9H694 974 aaKnown RBP6.64□□□□□ -1.35
C9orf3-205ENST00000427193 C9orf78Q9NZ63 289 aaPredicted RBP6.64□□□□□ -1.35
C9orf3-205ENST00000427193 NOX1Q9Y5S8 564 aa6.64□□□□□ -1.35
C9orf3-205ENST00000427193 MAST3O60307 1309 aa6.64□□□□□ -1.35
C9orf3-205ENST00000427193 SH3TC1Q8TE82 1336 aa6.64□□□□□ -1.35
C9orf3-205ENST00000427193 LAMA3Q16787 3333 aa6.64□□□□□ -1.35
C9orf3-205ENST00000427193 FDXRP22570 491 aa6.63□□□□□ -1.35
C9orf3-205ENST00000427193 LMO1P25800 156 aa6.63□□□□□ -1.35
C9orf3-205ENST00000427193 MPLP40238 635 aa6.63□□□□□ -1.35
C9orf3-205ENST00000427193 SCAPQ12770 1279 aa6.63□□□□□ -1.35
C9orf3-205ENST00000427193 ADRM1Q16186 407 aa6.63□□□□□ -1.35
C9orf3-205ENST00000427193 COLEC12Q5KU26 742 aa6.63□□□□□ -1.35
C9orf3-205ENST00000427193 TSHZ3Q63HK5 1081 aa6.63□□□□□ -1.35
C9orf3-205ENST00000427193 FBXO42Q6P3S6 717 aa6.63□□□□□ -1.35
C9orf3-205ENST00000427193 OLFM4Q6UX06 510 aa6.63□□□□□ -1.35
C9orf3-205ENST00000427193 MED25Q71SY5 747 aa6.63□□□□□ -1.35
C9orf3-205ENST00000427193 TSPEARQ8WU66 669 aa6.63□□□□□ -1.35
C9orf3-205ENST00000427193 GLIS2Q9BZE0 524 aaPredicted RBP6.63□□□□□ -1.35
C9orf3-205ENST00000427193 MOCS1Q9NZB8 636 aa6.63□□□□□ -1.35
C9orf3-205ENST00000427193 FAM30AQ9NZY2 134 aa6.63□□□□□ -1.35
C9orf3-205ENST00000427193 PGAP2Q9UHJ9 254 aa6.63□□□□□ -1.35
C9orf3-205ENST00000427193 TRMT112Q9UI30 125 aaKnown RBP6.63□□□□□ -1.35
C9orf3-205ENST00000427193 SCOCQ9UIL1 159 aa6.63□□□□□ -1.35
C9orf3-205ENST00000427193 CACNA1SQ13698 1873 aa6.62□□□□□ -1.35
C9orf3-205ENST00000427193 COL4A1P02462 1669 aa6.62□□□□□ -1.35
C9orf3-205ENST00000427193 SNED1Q8TER0 1413 aa6.62□□□□□ -1.35
C9orf3-205ENST00000427193 ELANEP08246 267 aa6.62□□□□□ -1.35
C9orf3-205ENST00000427193 ELLP55199 621 aaPredicted RBP6.62□□□□□ -1.35
C9orf3-205ENST00000427193 HUNKP57058 714 aa6.62□□□□□ -1.35
C9orf3-205ENST00000427193 RAP2BP61225 183 aa6.62□□□□□ -1.35
C9orf3-205ENST00000427193 KIF23Q02241 960 aaPredicted RBP6.62□□□□□ -1.35
C9orf3-205ENST00000427193 MUM1Q2TAK8 710 aa6.62□□□□□ -1.35
C9orf3-205ENST00000427193 ANO4Q32M45 955 aa6.62□□□□□ -1.35
C9orf3-205ENST00000427193 B3GNTL1Q67FW5 361 aaPredicted RBP6.62□□□□□ -1.35
C9orf3-205ENST00000427193 THNSL2Q86YJ6 484 aa6.62□□□□□ -1.35
C9orf3-205ENST00000427193 SLC44A3Q8N4M1 653 aa6.62□□□□□ -1.35
C9orf3-205ENST00000427193 CAGE1Q8TC20 777 aa6.62□□□□□ -1.35
C9orf3-205ENST00000427193 UHRF1Q96T88 793 aaPredicted RBP6.62□□□□□ -1.35
C9orf3-205ENST00000427193 MRI1Q9BV20 369 aa6.62□□□□□ -1.35
C9orf3-205ENST00000427193 ALOXE3Q9BYJ1 711 aa6.62□□□□□ -1.35
C9orf3-205ENST00000427193 NYXQ9GZU5 481 aa6.62□□□□□ -1.35
C9orf3-205ENST00000427193 RNPEPQ9H4A4 650 aa6.62□□□□□ -1.35
C9orf3-205ENST00000427193 GREM2Q9H772 168 aa6.62□□□□□ -1.35
C9orf3-205ENST00000427193 RBM12Q9NTZ6 932 aaKnown RBP6.62□□□□□ -1.35
C9orf3-205ENST00000427193 LAMB2P55268 1798 aa6.62□□□□□ -1.35
C9orf3-205ENST00000427193 DDX60Q8IY21 1712 aaKnown RBP6.62□□□□□ -1.35
C9orf3-205ENST00000427193 VCANP13611 3396 aa6.61□□□□□ -1.35
C9orf3-205ENST00000427193 SALL3Q9BXA9 1300 aa6.61□□□□□ -1.35
C9orf3-205ENST00000427193 SREBF1P36956 1147 aa6.61□□□□□ -1.35
C9orf3-205ENST00000427193 NUCB1Q02818 461 aa6.61□□□□□ -1.35
C9orf3-205ENST00000427193 STRN3Q13033 797 aa6.61□□□□□ -1.35
C9orf3-205ENST00000427193 MUM1L1Q5H9M0 696 aa6.61□□□□□ -1.35
C9orf3-205ENST00000427193 AFMIDQ63HM1 303 aa6.61□□□□□ -1.35
C9orf3-205ENST00000427193 RGMBQ6NW40 437 aa6.61□□□□□ -1.35
C9orf3-205ENST00000427193 CENPQQ7L2Z9 268 aaPredicted RBP6.61□□□□□ -1.35
C9orf3-205ENST00000427193 ATG9AQ7Z3C6 839 aa6.61□□□□□ -1.35
C9orf3-205ENST00000427193 GPR149Q86SP6 731 aa6.61□□□□□ -1.35
C9orf3-205ENST00000427193 FAM43AQ8N2R8 423 aa6.61□□□□□ -1.35
C9orf3-205ENST00000427193 PQLC1Q8N2U9 271 aa6.61□□□□□ -1.35
C9orf3-205ENST00000427193 VGLL2Q8N8G2 317 aa6.61□□□□□ -1.35
C9orf3-205ENST00000427193 CNBD1Q8NA66 436 aa6.61□□□□□ -1.35
C9orf3-205ENST00000427193 LMBR1Q8WVP7 490 aa6.61□□□□□ -1.35
C9orf3-205ENST00000427193 JDP2Q8WYK2 163 aa6.61□□□□□ -1.35
C9orf3-205ENST00000427193 BOD1Q96IK1 185 aa6.61□□□□□ -1.35
C9orf3-205ENST00000427193 IFT122Q9HBG6 1241 aa6.61□□□□□ -1.35
C9orf3-205ENST00000427193 LANCL2Q9NS86 450 aa6.61□□□□□ -1.35
C9orf3-205ENST00000427193 TMEM74BQ9NUR3 256 aa6.61□□□□□ -1.35
C9orf3-205ENST00000427193 TESQ9UGI8 421 aaKnown RBP6.61□□□□□ -1.35
C9orf3-205ENST00000427193 RIPOR2Q9Y4F9 1068 aa6.61□□□□□ -1.35
C9orf3-205ENST00000427193 A0A1B0GTW7 788 aa6.6□□□□□ -1.35
C9orf3-205ENST00000427193 GOLGA8AA7E2F4 631 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms