RNA–Protein interactions for RNA: ENST00000426253.5

NIF3L1-207, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-207ENST00000426253 ANKRD62A6NC57 917 aa6.83□□□□□ -1.32
NIF3L1-207ENST00000426253 TBKBP1A7MCY6 615 aa6.83□□□□□ -1.32
NIF3L1-207ENST00000426253 AGRPO00253 132 aa6.83□□□□□ -1.32
NIF3L1-207ENST00000426253 ASAP2O43150 1006 aa6.83□□□□□ -1.32
NIF3L1-207ENST00000426253 CSDE1O75534 798 aaKnown RBP6.83□□□□□ -1.32
NIF3L1-207ENST00000426253 EOMESO95936 686 aa6.83□□□□□ -1.32
NIF3L1-207ENST00000426253 SRGAP2CP0DJJ0 459 aa6.83□□□□□ -1.32
NIF3L1-207ENST00000426253 XRCC6P12956 609 aaKnown RBP eCLIP6.83□□□□□ -1.32
NIF3L1-207ENST00000426253 SPINK2P20155 84 aa6.83□□□□□ -1.32
NIF3L1-207ENST00000426253 FGFR4P22455 802 aa6.83□□□□□ -1.32
NIF3L1-207ENST00000426253 MCM2P49736 904 aa6.83□□□□□ -1.32
NIF3L1-207ENST00000426253 GATMP50440 423 aa6.83□□□□□ -1.32
NIF3L1-207ENST00000426253 POLGP54098 1239 aaPredicted RBP6.83□□□□□ -1.32
NIF3L1-207ENST00000426253 NFKBIBQ15653 356 aa6.83□□□□□ -1.32
NIF3L1-207ENST00000426253 LPAL2Q16609 132 aa6.83□□□□□ -1.32
NIF3L1-207ENST00000426253 PAN2Q504Q3 1202 aaKnown RBP6.83□□□□□ -1.32
NIF3L1-207ENST00000426253 SPOUT1Q5T280 376 aaKnown RBP6.83□□□□□ -1.32
NIF3L1-207ENST00000426253 CES5AQ6NT32 575 aa6.83□□□□□ -1.32
NIF3L1-207ENST00000426253 ANKRD54Q6NXT1 300 aa6.83□□□□□ -1.32
NIF3L1-207ENST00000426253 ZNF410Q86VK4 478 aa6.83□□□□□ -1.32
NIF3L1-207ENST00000426253 NOSTRINQ8IVI9 506 aa6.83□□□□□ -1.32
NIF3L1-207ENST00000426253 CMTR2Q8IYT2 770 aaKnown RBP6.83□□□□□ -1.32
NIF3L1-207ENST00000426253 RNF141Q8WVD5 230 aa6.83□□□□□ -1.32
NIF3L1-207ENST00000426253 TCP11Q8WWU5 503 aa6.83□□□□□ -1.32
NIF3L1-207ENST00000426253 TMEM143Q96AN5 459 aa6.83□□□□□ -1.32
NIF3L1-207ENST00000426253 BORCS6Q96GS4 357 aa6.83□□□□□ -1.32
NIF3L1-207ENST00000426253 TMX3Q96JJ7 454 aa6.83□□□□□ -1.32
NIF3L1-207ENST00000426253 ASPNQ9BXN1 380 aa6.83□□□□□ -1.32
NIF3L1-207ENST00000426253 KLHL25Q9H0H3 589 aa6.83□□□□□ -1.32
NIF3L1-207ENST00000426253 TMEM60Q9H2L4 133 aa6.83□□□□□ -1.32
NIF3L1-207ENST00000426253 DHX33Q9H6R0 707 aaKnown RBP6.83□□□□□ -1.32
NIF3L1-207ENST00000426253 ELAC1Q9H777 363 aaKnown RBP6.83□□□□□ -1.32
NIF3L1-207ENST00000426253 TBC1D17Q9HA65 648 aa6.83□□□□□ -1.32
NIF3L1-207ENST00000426253 RC3H2Q9HBD1 1191 aaKnown RBP6.83□□□□□ -1.32
NIF3L1-207ENST00000426253 CHST12Q9NRB3 414 aa6.83□□□□□ -1.32
NIF3L1-207ENST00000426253 ANKEF1Q9NU02 776 aa6.83□□□□□ -1.32
NIF3L1-207ENST00000426253 TYW1Q9NV66 732 aaKnown RBP6.83□□□□□ -1.32
NIF3L1-207ENST00000426253 FANCLQ9NW38 375 aa6.83□□□□□ -1.32
NIF3L1-207ENST00000426253 TMEM161AQ9NX61 479 aa6.83□□□□□ -1.32
NIF3L1-207ENST00000426253 RAB23Q9ULC3 237 aa6.83□□□□□ -1.32
NIF3L1-207ENST00000426253 CA14Q9ULX7 337 aa6.83□□□□□ -1.32
NIF3L1-207ENST00000426253 NOL7Q9UMY1 257 aaKnown RBP6.83□□□□□ -1.32
NIF3L1-207ENST00000426253 KIF3AQ9Y496 699 aa6.83□□□□□ -1.32
NIF3L1-207ENST00000426253 HELZ2Q9BYK8 2649 aaKnown RBP6.83□□□□□ -1.32
NIF3L1-207ENST00000426253 CEP295Q9C0D2 2601 aa6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 ADAMTS20P59510 1910 aa6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 CCDC163A0A0D9SF12 145 aa6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 A0A0U1RQF3 1178 aa6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 ESYT3A0FGR9 886 aa6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 RNF225M0QZC1 329 aaPredicted RBP6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 CBFA2T2O43439 604 aa6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 LYPLA2O95372 231 aa6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 ITGB1P05556 798 aa6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 EPHX1P07099 455 aa6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 LINC00271P0C7V0 271 aa6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 CD247P20963 164 aa6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 SFPQP23246 707 aaKnown RBP eCLIP6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 U2AF2P26368 475 aaKnown RBP eCLIP6.82□□□□□ -1.321e-6■□□□□ 9.2
NIF3L1-207ENST00000426253 TRAPPC10P48553 1259 aa6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 CSTF1Q05048 431 aaKnown RBP6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 LAMTOR4Q0VGL1 99 aa6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 ORC2Q13416 577 aaPredicted RBP6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 SQSTM1Q13501 440 aa6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 TDGQ13569 410 aa6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 AUHQ13825 339 aaKnown RBP6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 SV2CQ496J9 727 aa6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 TTC38Q5R3I4 469 aa6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 TDRD10Q5VZ19 366 aaKnown RBP6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 MCTP1Q6DN14 999 aa6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 PRR23CQ6ZRP0 262 aa6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 BEND4Q6ZU67 534 aa6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 CATSPER4Q7RTX7 472 aa6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 CATSPER3Q86XQ3 398 aa6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 ECHDC2Q86YB7 292 aa6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 ZDHHC14Q8IZN3 488 aa6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 SYNPOQ8N3V7 929 aa6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 RNF169Q8NCN4 708 aa6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 ZSWIM2Q8NEG5 633 aa6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 SPPL3Q8TCT6 385 aa6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 PIGOQ8TEQ8 1089 aa6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 P2RX5Q93086 422 aa6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 NLRP4Q96MN2 994 aa6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 CCDC43Q96MW1 224 aaKnown RBP6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 NECTIN4Q96NY8 510 aa6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 EPC1Q9H2F5 836 aa6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 KCNF1Q9H3M0 494 aa6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 IFT122Q9HBG6 1241 aa6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 SPATA6Q9NWH7 488 aaPredicted RBP6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 DACT1Q9NYF0 836 aa6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 DUSP12Q9UNI6 340 aa6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 SIT1Q9Y3P8 196 aa6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 PCDHB12Q9Y5F1 795 aa6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 PCDHGA2Q9Y5H1 932 aa6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 COL4A3BPQ9Y5P4 624 aa6.82□□□□□ -1.32
NIF3L1-207ENST00000426253 IGF2RP11717 2491 aa6.81□□□□□ -1.32
NIF3L1-207ENST00000426253 H3BQV1 296 aa6.81□□□□□ -1.32
NIF3L1-207ENST00000426253 LAMTOR5O43504 91 aa6.81□□□□□ -1.32
NIF3L1-207ENST00000426253 TBC1D4O60343 1298 aa6.81□□□□□ -1.32
NIF3L1-207ENST00000426253 MED24O75448 989 aa6.81□□□□□ -1.32
NIF3L1-207ENST00000426253 OR52Z1P0C646 297 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms