RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 PTPN1P18031 435 aaKnown RBP22.99■■□□□ 1.27
CDCP1-202ENST00000425231 CCNE1P24864 410 aa22.99■■□□□ 1.27
CDCP1-202ENST00000425231 AVPR1AP37288 418 aa22.99■■□□□ 1.27
CDCP1-202ENST00000425231 NUCB2P80303 420 aa22.99■■□□□ 1.27
CDCP1-202ENST00000425231 ZACNQ401N2 412 aa22.99■■□□□ 1.27
CDCP1-202ENST00000425231 MDH1BQ5I0G3 518 aa22.99■■□□□ 1.27
CDCP1-202ENST00000425231 C1orf220Q5T0J3 134 aa22.99■■□□□ 1.27
CDCP1-202ENST00000425231 FMR1NBQ8N0W7 255 aaPredicted RBP22.99■■□□□ 1.27
CDCP1-202ENST00000425231 GUF1Q8N442 669 aaKnown RBP22.99■■□□□ 1.27
CDCP1-202ENST00000425231 USP13Q92995 863 aaPredicted RBP22.99■■□□□ 1.27
CDCP1-202ENST00000425231 NKD2Q969F2 451 aaPredicted RBP22.99■■□□□ 1.27
CDCP1-202ENST00000425231 ELMO3Q96BJ8 720 aa22.99■■□□□ 1.27
CDCP1-202ENST00000425231 CEP295NLQ96MC4 621 aa22.99■■□□□ 1.27
CDCP1-202ENST00000425231 GTSE1Q9NYZ3 720 aa22.99■■□□□ 1.27
CDCP1-202ENST00000425231 GRIK1P39086 918 aa22.98■■□□□ 1.27
CDCP1-202ENST00000425231 SOX9P48436 509 aa22.98■■□□□ 1.27
CDCP1-202ENST00000425231 CDH8P55286 799 aa22.98■■□□□ 1.27
CDCP1-202ENST00000425231 ZNF699Q32M78 642 aa22.98■■□□□ 1.27
CDCP1-202ENST00000425231 MSANTD3Q96H12 275 aa22.98■■□□□ 1.27
CDCP1-202ENST00000425231 SMYD3Q9H7B4 428 aa22.98■■□□□ 1.27
CDCP1-202ENST00000425231 C8orf33Q9H7E9 229 aaPredicted RBP22.98■■□□□ 1.27
CDCP1-202ENST00000425231 TDP1Q9NUW8 608 aa22.98■■□□□ 1.27
CDCP1-202ENST00000425231 FRMD4BQ9Y2L6 1034 aa22.98■■□□□ 1.27
CDCP1-202ENST00000425231 KIF26AQ9ULI4 1882 aaPredicted RBP22.97■■□□□ 1.27
CDCP1-202ENST00000425231 ZNF638Q14966 1978 aaKnown RBP22.97■■□□□ 1.27
CDCP1-202ENST00000425231 CFAP54Q96N23 3096 aa22.97■■□□□ 1.27
CDCP1-202ENST00000425231 A8MXQ7 604 aa22.97■■□□□ 1.27
CDCP1-202ENST00000425231 IKBKBO14920 756 aa22.97■■□□□ 1.27
CDCP1-202ENST00000425231 MAPK13O15264 365 aa22.97■■□□□ 1.27
CDCP1-202ENST00000425231 LAMTOR5O43504 91 aa22.97■■□□□ 1.27
CDCP1-202ENST00000425231 KPNA1P52294 538 aaPredicted RBP22.97■■□□□ 1.27
CDCP1-202ENST00000425231 PLCB2Q00722 1185 aa22.97■■□□□ 1.27
CDCP1-202ENST00000425231 ZNF667Q5HYK9 610 aa22.97■■□□□ 1.27
CDCP1-202ENST00000425231 SV2AQ7L0J3 742 aa22.97■■□□□ 1.27
CDCP1-202ENST00000425231 FANCMQ8IYD8 2048 aa22.97■■□□□ 1.27
CDCP1-202ENST00000425231 RIN3Q8TB24 985 aa22.97■■□□□ 1.27
CDCP1-202ENST00000425231 FBXO4Q9UKT5 387 aa22.97■■□□□ 1.27
CDCP1-202ENST00000425231 R4GN57 208 aa22.97■■□□□ 1.27
CDCP1-202ENST00000425231 ANAPC1Q9H1A4 1944 aa22.96■■□□□ 1.27
CDCP1-202ENST00000425231 AKAP3O75969 853 aa22.96■■□□□ 1.27
CDCP1-202ENST00000425231 CHRNB1P11230 501 aa22.96■■□□□ 1.27
CDCP1-202ENST00000425231 NR2F2P24468 414 aa22.96■■□□□ 1.27
CDCP1-202ENST00000425231 TNK2Q07912 1038 aa22.96■■□□□ 1.27
CDCP1-202ENST00000425231 SGSM1Q2NKQ1 1148 aa22.96■■□□□ 1.27
CDCP1-202ENST00000425231 ZCWPW2Q504Y3 356 aa22.96■■□□□ 1.27
CDCP1-202ENST00000425231 TXNDC11Q6PKC3 985 aa22.96■■□□□ 1.27
CDCP1-202ENST00000425231 B3GALNT2Q8NCR0 500 aa22.96■■□□□ 1.27
CDCP1-202ENST00000425231 ENGASEQ8NFI3 743 aa22.96■■□□□ 1.27
CDCP1-202ENST00000425231 TTC8Q8TAM2 541 aa22.96■■□□□ 1.27
CDCP1-202ENST00000425231 SLC22A12Q96S37 553 aa22.96■■□□□ 1.27
CDCP1-202ENST00000425231 FAM83CQ9BQN1 747 aa22.96■■□□□ 1.27
CDCP1-202ENST00000425231 SDCBP2Q9H190 292 aa22.96■■□□□ 1.27
CDCP1-202ENST00000425231 LMAN1LQ9HAT1 526 aa22.96■■□□□ 1.27
CDCP1-202ENST00000425231 GKN1Q9NS71 199 aa22.96■■□□□ 1.27
CDCP1-202ENST00000425231 TMEM30AQ9NV96 361 aa22.96■■□□□ 1.27
CDCP1-202ENST00000425231 THG1LQ9NWX6 298 aaKnown RBP22.96■■□□□ 1.27
CDCP1-202ENST00000425231 SPECC1L-ADORA2AF8WAN1 911 aa22.95■■□□□ 1.26
CDCP1-202ENST00000425231 CTHP32929 405 aa22.95■■□□□ 1.26
CDCP1-202ENST00000425231 VAMP7P51809 220 aa22.95■■□□□ 1.26
CDCP1-202ENST00000425231 CACNA2D1P54289 1103 aa22.95■■□□□ 1.26
CDCP1-202ENST00000425231 USP46P62068 366 aa22.95■■□□□ 1.26
CDCP1-202ENST00000425231 MTAPQ13126 283 aa22.95■■□□□ 1.26
CDCP1-202ENST00000425231 PNOCQ13519 176 aa22.95■■□□□ 1.26
CDCP1-202ENST00000425231 ZNF268Q14587 947 aaPredicted RBP22.95■■□□□ 1.26
CDCP1-202ENST00000425231 ZNF528Q3MIS6 628 aa22.95■■□□□ 1.26
CDCP1-202ENST00000425231 C1orf228Q6PIY5 440 aa22.95■■□□□ 1.26
CDCP1-202ENST00000425231 DENND5BQ6ZUT9 1274 aa22.95■■□□□ 1.26
CDCP1-202ENST00000425231 RALGPS2Q86X27 583 aaPredicted RBP22.95■■□□□ 1.26
CDCP1-202ENST00000425231 C8orf48Q96LL4 319 aa22.95■■□□□ 1.26
CDCP1-202ENST00000425231 CYP2S1Q96SQ9 504 aa22.95■■□□□ 1.26
CDCP1-202ENST00000425231 B3GNT5Q9BYG0 378 aa22.95■■□□□ 1.26
CDCP1-202ENST00000425231 CHRDQ9H2X0 955 aa22.95■■□□□ 1.26
CDCP1-202ENST00000425231 KIF9Q9HAQ2 790 aa22.95■■□□□ 1.26
CDCP1-202ENST00000425231 F8VP50 259 aa22.94■■□□□ 1.26
CDCP1-202ENST00000425231 TRIM66O15016 1216 aa22.94■■□□□ 1.26
CDCP1-202ENST00000425231 RAP1GAPP47736 663 aa22.94■■□□□ 1.26
CDCP1-202ENST00000425231 WDR44Q5JSH3 913 aa22.94■■□□□ 1.26
CDCP1-202ENST00000425231 MAMSTRQ6ZN01 415 aa22.94■■□□□ 1.26
CDCP1-202ENST00000425231 CCDC34Q96HJ3 373 aa22.94■■□□□ 1.26
CDCP1-202ENST00000425231 TTLL2Q9BWV7 592 aa22.94■■□□□ 1.26
CDCP1-202ENST00000425231 ZNF518BQ9C0D4 1074 aa22.94■■□□□ 1.26
CDCP1-202ENST00000425231 SEMA4AQ9H3S1 761 aa22.94■■□□□ 1.26
CDCP1-202ENST00000425231 GCNT4Q9P109 453 aa22.94■■□□□ 1.26
CDCP1-202ENST00000425231 RIF1Q5UIP0 2472 aaKnown RBP22.94■■□□□ 1.26
CDCP1-202ENST00000425231 C2orf78A6NCI8 922 aa22.93■■□□□ 1.26
CDCP1-202ENST00000425231 CLDN5O00501 218 aa22.93■■□□□ 1.26
CDCP1-202ENST00000425231 RPL13P26373 211 aaKnown RBP22.93■■□□□ 1.26
CDCP1-202ENST00000425231 ANXA13P27216 316 aa22.93■■□□□ 1.26
CDCP1-202ENST00000425231 MCCD1P59942 119 aaPredicted RBP22.93■■□□□ 1.26
CDCP1-202ENST00000425231 NOP14P78316 857 aaKnown RBP22.93■■□□□ 1.26
CDCP1-202ENST00000425231 CSTF1Q05048 431 aaKnown RBP22.93■■□□□ 1.26
CDCP1-202ENST00000425231 ADAM9Q13443 819 aa22.93■■□□□ 1.26
CDCP1-202ENST00000425231 SCARA5Q6ZMJ2 495 aa22.93■■□□□ 1.26
CDCP1-202ENST00000425231 INTS8Q75QN2 995 aaKnown RBP22.93■■□□□ 1.26
CDCP1-202ENST00000425231 SMYD4Q8IYR2 804 aaPredicted RBP22.93■■□□□ 1.26
CDCP1-202ENST00000425231 TAF4BQ92750 862 aa22.93■■□□□ 1.26
CDCP1-202ENST00000425231 ELOVL4Q9GZR5 314 aa22.93■■□□□ 1.26
CDCP1-202ENST00000425231 TRPC7Q9HCX4 862 aa22.93■■□□□ 1.26
CDCP1-202ENST00000425231 HPS4Q9NQG7 708 aa22.93■■□□□ 1.26
CDCP1-202ENST00000425231 PRMT8Q9NR22 394 aaPredicted RBP22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms