RNA–Protein interactions for RNA: ENST00000424135.5

PLOD3-204, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 5

Gene PLOD3, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-204ENST00000424135 A0A087X0B3 334 aa12.58□□□□□ -0.4
PLOD3-204ENST00000424135 TRAV19A0A0A6YYK7 116 aa12.58□□□□□ -0.4
PLOD3-204ENST00000424135 K7EQS6 105 aa12.58□□□□□ -0.4
PLOD3-204ENST00000424135 GABRDO14764 452 aa12.58□□□□□ -0.4
PLOD3-204ENST00000424135 FOXD2O60548 495 aaPredicted RBP12.58□□□□□ -0.4
PLOD3-204ENST00000424135 APBB3O95704 486 aa12.58□□□□□ -0.4
PLOD3-204ENST00000424135 CHRM1P11229 460 aaPredicted RBP12.58□□□□□ -0.4
PLOD3-204ENST00000424135 SPINK2P20155 84 aa12.58□□□□□ -0.4
PLOD3-204ENST00000424135 OPRD1P41143 372 aa12.58□□□□□ -0.4
PLOD3-204ENST00000424135 IFNAR2P48551 515 aa12.58□□□□□ -0.4
PLOD3-204ENST00000424135 SEC13P55735 322 aa12.58□□□□□ -0.4
PLOD3-204ENST00000424135 SHC2P98077 582 aa12.58□□□□□ -0.4
PLOD3-204ENST00000424135 POU5F1Q01860 360 aaKnown RBP12.58□□□□□ -0.4
PLOD3-204ENST00000424135 L1TD1Q5T7N2 865 aaKnown RBP12.58□□□□□ -0.4
PLOD3-204ENST00000424135 RNF43Q68DV7 783 aa12.58□□□□□ -0.4
PLOD3-204ENST00000424135 ADGRF2Q8IZF7 708 aa12.58□□□□□ -0.4
PLOD3-204ENST00000424135 CPA6Q8N4T0 437 aa12.58□□□□□ -0.4
PLOD3-204ENST00000424135 CCDC33Q8N5R6 958 aa12.58□□□□□ -0.4
PLOD3-204ENST00000424135 OR5B17Q8NGF7 314 aa12.58□□□□□ -0.4
PLOD3-204ENST00000424135 NOC3LQ8WTT2 800 aaKnown RBP12.58□□□□□ -0.4
PLOD3-204ENST00000424135 KBTBD7Q8WVZ9 684 aa12.58□□□□□ -0.4
PLOD3-204ENST00000424135 DDX1Q92499 740 aaKnown RBP12.58□□□□□ -0.4
PLOD3-204ENST00000424135 HPS3Q969F9 1004 aa12.58□□□□□ -0.4
PLOD3-204ENST00000424135 TRMT2BQ96GJ1 504 aaKnown RBP12.58□□□□□ -0.4
PLOD3-204ENST00000424135 EDEM2Q9BV94 578 aa12.58□□□□□ -0.4
PLOD3-204ENST00000424135 PANK2Q9BZ23 570 aa12.58□□□□□ -0.4
PLOD3-204ENST00000424135 TPSD1Q9BZJ3 242 aa12.58□□□□□ -0.4
PLOD3-204ENST00000424135 ABCB6Q9NP58 842 aa12.58□□□□□ -0.4
PLOD3-204ENST00000424135 ZDHHC4Q9NPG8 344 aa12.58□□□□□ -0.4
PLOD3-204ENST00000424135 VPS45Q9NRW7 570 aa12.58□□□□□ -0.4
PLOD3-204ENST00000424135 GDAP2Q9NXN4 497 aa12.58□□□□□ -0.4
PLOD3-204ENST00000424135 RBAKQ9NYW8 714 aaPredicted RBP12.58□□□□□ -0.4
PLOD3-204ENST00000424135 ZMYM5Q9UJ78 669 aa12.58□□□□□ -0.4
PLOD3-204ENST00000424135 SMC3Q9UQE7 1217 aa12.58□□□□□ -0.4
PLOD3-204ENST00000424135 PCDHGA5Q9Y5G8 931 aa12.58□□□□□ -0.4
PLOD3-204ENST00000424135 ZFYVE26Q68DK2 2539 aa12.57□□□□□ -0.4
PLOD3-204ENST00000424135 LNP1A1A4G5 178 aa12.57□□□□□ -0.4
PLOD3-204ENST00000424135 BCLAF3A2AJT9 711 aaKnown RBP12.57□□□□□ -0.4
PLOD3-204ENST00000424135 HUS1O60921 280 aa12.57□□□□□ -0.4
PLOD3-204ENST00000424135 PRPF6O94906 941 aaKnown RBP12.57□□□□□ -0.4
PLOD3-204ENST00000424135 GCNT3O95395 438 aa12.57□□□□□ -0.4
PLOD3-204ENST00000424135 CAVIN2O95810 425 aa12.57□□□□□ -0.4
PLOD3-204ENST00000424135 KRT19P08727 400 aa12.57□□□□□ -0.4
PLOD3-204ENST00000424135 USP17L7P0C7H9 530 aa12.57□□□□□ -0.4
PLOD3-204ENST00000424135 PNPLA4P41247 253 aa12.57□□□□□ -0.4
PLOD3-204ENST00000424135 SLC6A11P48066 632 aa12.57□□□□□ -0.4
PLOD3-204ENST00000424135 RPL10AP62906 217 aaKnown RBP12.57□□□□□ -0.4
PLOD3-204ENST00000424135 POSTNQ15063 836 aa12.57□□□□□ -0.4
PLOD3-204ENST00000424135 C2orf27AQ580R0 203 aa12.57□□□□□ -0.4
PLOD3-204ENST00000424135 FAM171BQ6P995 826 aa12.57□□□□□ -0.4
PLOD3-204ENST00000424135 LIMS2Q7Z4I7 341 aa12.57□□□□□ -0.4
PLOD3-204ENST00000424135 NT5DC4Q86YG4 428 aa12.57□□□□□ -0.4
PLOD3-204ENST00000424135 SPATA2LQ8IUW3 424 aaPredicted RBP12.57□□□□□ -0.4
PLOD3-204ENST00000424135 FRMD1Q8N878 549 aa12.57□□□□□ -0.4
PLOD3-204ENST00000424135 USP33Q8TEY7 942 aa12.57□□□□□ -0.4
PLOD3-204ENST00000424135 MYLPFQ96A32 169 aa12.57□□□□□ -0.4
PLOD3-204ENST00000424135 HVCN1Q96D96 273 aa12.57□□□□□ -0.4
PLOD3-204ENST00000424135 ACCSQ96QU6 501 aa12.57□□□□□ -0.4
PLOD3-204ENST00000424135 TMEM30AQ9NV96 361 aa12.57□□□□□ -0.4
PLOD3-204ENST00000424135 EBF1Q9UH73 591 aa12.57□□□□□ -0.4
PLOD3-204ENST00000424135 KIAA1549LQ6ZVL6 1849 aa12.57□□□□□ -0.4
PLOD3-204ENST00000424135 ANAPC1Q9H1A4 1944 aa12.56□□□□□ -0.4
PLOD3-204ENST00000424135 SOBPA7XYQ1 873 aa12.56□□□□□ -0.4
PLOD3-204ENST00000424135 C1QTNF9BB2RNN3 333 aa12.56□□□□□ -0.4
PLOD3-204ENST00000424135 PDGFRBP09619 1106 aa12.56□□□□□ -0.4
PLOD3-204ENST00000424135 C1QTNF9P0C862 333 aa12.56□□□□□ -0.4
PLOD3-204ENST00000424135 HDCP19113 662 aa12.56□□□□□ -0.4
PLOD3-204ENST00000424135 BDNFP23560 247 aa12.56□□□□□ -0.4
PLOD3-204ENST00000424135 GBP1P32455 592 aa12.56□□□□□ -0.4
PLOD3-204ENST00000424135 HOXD13P35453 343 aa12.56□□□□□ -0.4
PLOD3-204ENST00000424135 DGKEP52429 567 aa12.56□□□□□ -0.4
PLOD3-204ENST00000424135 CACNA2D1P54289 1103 aa12.56□□□□□ -0.4
PLOD3-204ENST00000424135 RBP5P82980 135 aa12.56□□□□□ -0.4
PLOD3-204ENST00000424135 MYL7Q01449 175 aa12.56□□□□□ -0.4
PLOD3-204ENST00000424135 CFAP221Q4G0U5 840 aa12.56□□□□□ -0.4
PLOD3-204ENST00000424135 FBXO43Q4G163 708 aa12.56□□□□□ -0.4
PLOD3-204ENST00000424135 EMC10Q5UCC4 262 aa12.56□□□□□ -0.4
PLOD3-204ENST00000424135 ANO7Q6IWH7 933 aa12.56□□□□□ -0.4
PLOD3-204ENST00000424135 TMEM92Q6UXU6 159 aa12.56□□□□□ -0.4
PLOD3-204ENST00000424135 TMEM86AQ8N2M4 240 aa12.56□□□□□ -0.4
PLOD3-204ENST00000424135 LRRC52Q8N7C0 313 aa12.56□□□□□ -0.4
PLOD3-204ENST00000424135 ATP2A3Q93084 1043 aa12.56□□□□□ -0.4
PLOD3-204ENST00000424135 RNF38Q9H0F5 515 aa12.56□□□□□ -0.4
PLOD3-204ENST00000424135 TMEM206Q9H813 350 aa12.56□□□□□ -0.4
PLOD3-204ENST00000424135 INTS13Q9NVM9 706 aa12.56□□□□□ -0.4
PLOD3-204ENST00000424135 UXTQ9UBK9 157 aaPredicted RBP12.56□□□□□ -0.4
PLOD3-204ENST00000424135 ARHGAP26Q9UNA1 814 aa12.56□□□□□ -0.4
PLOD3-204ENST00000424135 WASF3Q9UPY6 502 aa12.56□□□□□ -0.4
PLOD3-204ENST00000424135 ATRXP46100 2492 aa12.55□□□□□ -0.4
PLOD3-204ENST00000424135 FRMD3A2A2Y4 597 aa12.55□□□□□ -0.4
PLOD3-204ENST00000424135 VPS37CA5D8V6 355 aaPredicted RBP12.55□□□□□ -0.4
PLOD3-204ENST00000424135 LEFTY2O00292 366 aa12.55□□□□□ -0.4
PLOD3-204ENST00000424135 CDX4O14627 284 aaPredicted RBP12.55□□□□□ -0.4
PLOD3-204ENST00000424135 BMP15O95972 392 aa12.55□□□□□ -0.4
PLOD3-204ENST00000424135 CYP17A1P05093 508 aa12.55□□□□□ -0.4
PLOD3-204ENST00000424135 IDEP14735 1019 aa12.55□□□□□ -0.4
PLOD3-204ENST00000424135 GARTP22102 1010 aa12.55□□□□□ -0.4
PLOD3-204ENST00000424135 ABCD1P33897 745 aa12.55□□□□□ -0.4
PLOD3-204ENST00000424135 NOVA1P51513 510 aaKnown RBP12.55□□□□□ -0.4
PLOD3-204ENST00000424135 AMPD2Q01433 879 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms