RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 WASF2Q9Y6W5 498 aa15.05■□□□□ -0
MSH5-206ENST00000423982 PTPRJQ12913 1337 aa15.05■□□□□ -0
MSH5-206ENST00000423982 F8VP50 259 aa15.04■□□□□ -0
MSH5-206ENST00000423982 SMAPO00193 183 aa15.04■□□□□ -0
MSH5-206ENST00000423982 GSC2O15499 205 aa15.04■□□□□ -0
MSH5-206ENST00000423982 TOMM70O94826 608 aa15.04■□□□□ -0
MSH5-206ENST00000423982 KRT1P04264 644 aa15.04■□□□□ -0
MSH5-206ENST00000423982 KCTD2Q14681 263 aa15.04■□□□□ -0
MSH5-206ENST00000423982 TAF1CQ15572 869 aaPredicted RBP15.04■□□□□ -0
MSH5-206ENST00000423982 RNASEH2BQ5TBB1 312 aaKnown RBP15.04■□□□□ -0
MSH5-206ENST00000423982 TMEM270Q6UE05 265 aa15.04■□□□□ -0
MSH5-206ENST00000423982 ZC3H18Q86VM9 953 aaKnown RBP15.04■□□□□ -0
MSH5-206ENST00000423982 ALLCQ8N6M5 410 aa15.04■□□□□ -0
MSH5-206ENST00000423982 SLITRK1Q96PX8 696 aa15.04■□□□□ -0
MSH5-206ENST00000423982 MMP19Q99542 508 aa15.04■□□□□ -0
MSH5-206ENST00000423982 PSMC3IPQ9P2W1 217 aaPredicted RBP15.04■□□□□ -0
MSH5-206ENST00000423982 RABGEF1Q9UJ41 708 aa15.04■□□□□ -0
MSH5-206ENST00000423982 TELO2Q9Y4R8 837 aa15.04■□□□□ -0
MSH5-206ENST00000423982 PCDHB2Q9Y5E7 798 aa15.04■□□□□ -0
MSH5-206ENST00000423982 TRPM7Q96QT4 1865 aa15.04■□□□□ -0
MSH5-206ENST00000423982 TMEM88BA6NKF7 163 aa15.04■□□□□ -0
MSH5-206ENST00000423982 SGK1O00141 431 aa15.04■□□□□ -0
MSH5-206ENST00000423982 LGR5O75473 907 aa15.04■□□□□ -0
MSH5-206ENST00000423982 NEFHP12036 1026 aa15.04■□□□□ -0
MSH5-206ENST00000423982 PAPOLAP51003 745 aaKnown RBP15.04■□□□□ -0
MSH5-206ENST00000423982 GDF10P55107 478 aa15.04■□□□□ -0
MSH5-206ENST00000423982 ZNF252P-AS1Q0IIN9 211 aa15.04■□□□□ -0
MSH5-206ENST00000423982 PPP1R15BQ5SWA1 713 aa15.04■□□□□ -0
MSH5-206ENST00000423982 AP1ARQ63HQ0 302 aa15.04■□□□□ -0
MSH5-206ENST00000423982 KBTBD2Q8IY47 623 aa15.04■□□□□ -0
MSH5-206ENST00000423982 FBXO27Q8NI29 283 aa15.04■□□□□ -0
MSH5-206ENST00000423982 PTCD3Q96EY7 689 aaKnown RBP15.04■□□□□ -0
MSH5-206ENST00000423982 MFSD14AQ96MC6 490 aa15.04■□□□□ -0
MSH5-206ENST00000423982 ANKRD27Q96NW4 1050 aa15.04■□□□□ -0
MSH5-206ENST00000423982 DDX50Q9BQ39 737 aaKnown RBP15.04■□□□□ -0
MSH5-206ENST00000423982 ANKFY1Q9P2R3 1169 aa15.04■□□□□ -0
MSH5-206ENST00000423982 TCRBV7S3A2A0A539 114 aa15.03■□□□□ -0
MSH5-206ENST00000423982 HNRNPDLO14979 420 aaKnown RBP15.03■□□□□ -0
MSH5-206ENST00000423982 ALOX15BO15296 676 aa15.03■□□□□ -0
MSH5-206ENST00000423982 CETN2P41208 172 aa15.03■□□□□ -0
MSH5-206ENST00000423982 NOMO3P69849 1222 aa15.03■□□□□ -0
MSH5-206ENST00000423982 GCNT1Q02742 428 aa15.03■□□□□ -0
MSH5-206ENST00000423982 PTP4A2Q12974 167 aa15.03■□□□□ -0
MSH5-206ENST00000423982 CCDC142Q17RM4 750 aa15.03■□□□□ -0
MSH5-206ENST00000423982 MDH1BQ5I0G3 518 aa15.03■□□□□ -0
MSH5-206ENST00000423982 FYB2Q5VWT5 728 aa15.03■□□□□ -0
MSH5-206ENST00000423982 OR52E8Q6IFG1 317 aa15.03■□□□□ -0
MSH5-206ENST00000423982 ANKRD23Q86SG2 305 aa15.03■□□□□ -0
MSH5-206ENST00000423982 MAP4K3Q8IVH8 894 aa15.03■□□□□ -0
MSH5-206ENST00000423982 TMEM174Q8WUU8 243 aa15.03■□□□□ -0
MSH5-206ENST00000423982 BTBD10Q9BSF8 475 aa15.03■□□□□ -0
MSH5-206ENST00000423982 AGO4Q9HCK5 861 aaKnown RBP15.03■□□□□ -0
MSH5-206ENST00000423982 KMT5AQ9NQR1 393 aa15.03■□□□□ -0
MSH5-206ENST00000423982 LNPEPQ9UIQ6 1025 aa15.03■□□□□ -0
MSH5-206ENST00000423982 TLL2Q9Y6L7 1015 aa15.03■□□□□ -0
MSH5-206ENST00000423982 SOWAHBA6NEL2 793 aa15.03■□□□□ -0
MSH5-206ENST00000423982 GYG2O15488 501 aa15.03■□□□□ -0
MSH5-206ENST00000423982 AHCYL1O43865 530 aa15.03■□□□□ -0
MSH5-206ENST00000423982 AOC2O75106 756 aa15.03■□□□□ -0
MSH5-206ENST00000423982 HAUS5O94927 633 aa15.03■□□□□ -0
MSH5-206ENST00000423982 VHLP40337 213 aa15.03■□□□□ -0
MSH5-206ENST00000423982 OGDHQ02218 1023 aa15.03■□□□□ -0
MSH5-206ENST00000423982 SEPT7Q16181 437 aaKnown RBP15.03■□□□□ -0
MSH5-206ENST00000423982 PAFAH2Q99487 392 aa15.03■□□□□ -0
MSH5-206ENST00000423982 PARK7Q99497 189 aaKnown RBP15.03■□□□□ -0
MSH5-206ENST00000423982 KCNK13Q9HB14 408 aa15.03■□□□□ -0
MSH5-206ENST00000423982 ASB3Q9Y575 518 aa15.03■□□□□ -0
MSH5-206ENST00000423982 LOXHD1Q8IVV2 1947 aa15.03■□□□□ -0
MSH5-206ENST00000423982 UNCXA6NJT0 531 aa15.02■□□□□ -0
MSH5-206ENST00000423982 SNUPNO95149 360 aaKnown RBP15.02■□□□□ -0
MSH5-206ENST00000423982 CCNE2O96020 404 aa15.02■□□□□ -0
MSH5-206ENST00000423982 AMPD1P23109 780 aa15.02■□□□□ -0
MSH5-206ENST00000423982 CCND2P30279 289 aa15.02■□□□□ -0
MSH5-206ENST00000423982 ACOT2P49753 483 aa15.02■□□□□ -0
MSH5-206ENST00000423982 GEMIN4P57678 1058 aaKnown RBP15.02■□□□□ -0
MSH5-206ENST00000423982 FAM81BQ96LP2 452 aa15.02■□□□□ -0
MSH5-206ENST00000423982 TTC25Q96NG3 672 aa15.02■□□□□ -0
MSH5-206ENST00000423982 TMEM120AQ9BXJ8 343 aa15.02■□□□□ -0
MSH5-206ENST00000423982 MANSC1Q9H8J5 431 aa15.02■□□□□ -0
MSH5-206ENST00000423982 APOBEC3GQ9HC16 384 aaKnown RBP15.02■□□□□ -0
MSH5-206ENST00000423982 TAS2R1Q9NYW7 299 aa15.02■□□□□ -0
MSH5-206ENST00000423982 STOML1Q9UBI4 398 aa15.02■□□□□ -0
MSH5-206ENST00000423982 FBXO40Q9UH90 709 aa15.02■□□□□ -0
MSH5-206ENST00000423982 E5RJQ4 531 aa15.02□□□□□ -0.01
MSH5-206ENST00000423982 CCDC22O60826 627 aa15.02□□□□□ -0.01
MSH5-206ENST00000423982 RGS20O76081 388 aa15.02□□□□□ -0.01
MSH5-206ENST00000423982 NPTXRO95502 500 aa15.02□□□□□ -0.01
MSH5-206ENST00000423982 HLA-DRAP01903 254 aa15.02□□□□□ -0.01
MSH5-206ENST00000423982 SLC10A3P09131 477 aa15.02□□□□□ -0.01
MSH5-206ENST00000423982 TROVE2P10155 538 aaKnown RBP eCLIP15.02□□□□□ -0.01
MSH5-206ENST00000423982 TNNI1P19237 187 aa15.02□□□□□ -0.01
MSH5-206ENST00000423982 RAB27AP51159 221 aa15.02□□□□□ -0.01
MSH5-206ENST00000423982 HIF1AQ16665 826 aa15.02□□□□□ -0.01
MSH5-206ENST00000423982 EFHC2Q5JST6 749 aa15.02□□□□□ -0.01
MSH5-206ENST00000423982 TDRD10Q5VZ19 366 aaKnown RBP15.02□□□□□ -0.01
MSH5-206ENST00000423982 C3orf62Q6ZUJ4 267 aa15.02□□□□□ -0.01
MSH5-206ENST00000423982 CENPUQ71F23 418 aa15.02□□□□□ -0.01
MSH5-206ENST00000423982 ANO5Q75V66 913 aa15.02□□□□□ -0.01
MSH5-206ENST00000423982 VSIG10LQ86VR7 867 aa15.02□□□□□ -0.01
MSH5-206ENST00000423982 RHPN2Q8IUC4 686 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms