RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 KMT2EQ8IZD2 1858 aa9.85□□□□□ -0.83
PDGFC-202ENST00000422544 DNAH14Q0VDD8 3507 aa9.85□□□□□ -0.83
PDGFC-202ENST00000422544 GRXCR2A6NFK2 248 aa9.85□□□□□ -0.83
PDGFC-202ENST00000422544 PI4K2BG5E9Z4 385 aa9.85□□□□□ -0.83
PDGFC-202ENST00000422544 FOXN3O00409 490 aaPredicted RBP9.85□□□□□ -0.83
PDGFC-202ENST00000422544 EPHB6O15197 1021 aa9.85□□□□□ -0.83
PDGFC-202ENST00000422544 CALCAP01258 141 aa9.85□□□□□ -0.83
PDGFC-202ENST00000422544 LRG1P02750 347 aa9.85□□□□□ -0.83
PDGFC-202ENST00000422544 HNRNPA1P09651 372 aaKnown RBP eCLIP9.85□□□□□ -0.83
PDGFC-202ENST00000422544 UCHL3P15374 230 aa9.85□□□□□ -0.83
PDGFC-202ENST00000422544 TRIM21P19474 475 aaKnown RBP9.85□□□□□ -0.83
PDGFC-202ENST00000422544 ADORA2BP29275 332 aa9.85□□□□□ -0.83
PDGFC-202ENST00000422544 USP8P40818 1118 aa9.85□□□□□ -0.83
PDGFC-202ENST00000422544 ALDH1A3P47895 512 aa9.85□□□□□ -0.83
PDGFC-202ENST00000422544 ITIH3Q06033 890 aa9.85□□□□□ -0.83
PDGFC-202ENST00000422544 RAPGEF1Q13905 1077 aa9.85□□□□□ -0.83
PDGFC-202ENST00000422544 DRAP1Q14919 205 aaPredicted RBP9.85□□□□□ -0.83
PDGFC-202ENST00000422544 DDR2Q16832 855 aa9.85□□□□□ -0.83
PDGFC-202ENST00000422544 LEXMQ3ZCV2 418 aa9.85□□□□□ -0.83
PDGFC-202ENST00000422544 CFAP221Q4G0U5 840 aa9.85□□□□□ -0.83
PDGFC-202ENST00000422544 TMEM31Q5JXX7 168 aa9.85□□□□□ -0.83
PDGFC-202ENST00000422544 ATAT1Q5SQI0 421 aa9.85□□□□□ -0.83
PDGFC-202ENST00000422544 PPP1R26Q5T8A7 1209 aaPredicted RBP9.85□□□□□ -0.83
PDGFC-202ENST00000422544 CES5AQ6NT32 575 aa9.85□□□□□ -0.83
PDGFC-202ENST00000422544 GPR149Q86SP6 731 aa9.85□□□□□ -0.83
PDGFC-202ENST00000422544 SCN4BQ8IWT1 228 aa9.85□□□□□ -0.83
PDGFC-202ENST00000422544 FUKQ8N0W3 1084 aa9.85□□□□□ -0.83
PDGFC-202ENST00000422544 RBBP8NLQ8NC74 664 aaPredicted RBP9.85□□□□□ -0.83
PDGFC-202ENST00000422544 SMRP1Q8NCR6 262 aa9.85□□□□□ -0.83
PDGFC-202ENST00000422544 CMASQ8NFW8 434 aaPredicted RBP9.85□□□□□ -0.83
PDGFC-202ENST00000422544 NEK11Q8NG66 645 aa9.85□□□□□ -0.83
PDGFC-202ENST00000422544 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.85□□□□□ -0.83
PDGFC-202ENST00000422544 SLC2A14Q8TDB8 520 aa9.85□□□□□ -0.83
PDGFC-202ENST00000422544 GPR152Q8TDT2 470 aa9.85□□□□□ -0.83
PDGFC-202ENST00000422544 GIPC2Q8TF65 315 aa9.85□□□□□ -0.83
PDGFC-202ENST00000422544 SMG7Q92540 1137 aaKnown RBP9.85□□□□□ -0.83
PDGFC-202ENST00000422544 JAKMIP2Q96AA8 810 aa9.85□□□□□ -0.83
PDGFC-202ENST00000422544 CYFIP2Q96F07 1278 aa9.85□□□□□ -0.83
PDGFC-202ENST00000422544 FUBP3Q96I24 572 aaKnown RBP eCLIP9.85□□□□□ -0.83
PDGFC-202ENST00000422544 NAA15Q9BXJ9 866 aaKnown RBP9.85□□□□□ -0.83
PDGFC-202ENST00000422544 DNAI2Q9GZS0 605 aa9.85□□□□□ -0.83
PDGFC-202ENST00000422544 GANQ9H2C0 597 aa9.85□□□□□ -0.83
PDGFC-202ENST00000422544 PIDD1Q9HB75 910 aa9.85□□□□□ -0.83
PDGFC-202ENST00000422544 CEP72Q9P209 647 aa9.85□□□□□ -0.83
PDGFC-202ENST00000422544 HSFX1Q9UBD0 423 aa9.85□□□□□ -0.83
PDGFC-202ENST00000422544 CNTN6Q9UQ52 1028 aa9.85□□□□□ -0.83
PDGFC-202ENST00000422544 CYP26A1O43174 497 aa9.84□□□□□ -0.83
PDGFC-202ENST00000422544 XYLBO75191 536 aa9.84□□□□□ -0.83
PDGFC-202ENST00000422544 PAEPP09466 180 aa9.84□□□□□ -0.83
PDGFC-202ENST00000422544 PNMA6AP0CW24 399 aaPredicted RBP9.84□□□□□ -0.83
PDGFC-202ENST00000422544 VDRP11473 427 aa9.84□□□□□ -0.83
PDGFC-202ENST00000422544 CD19P15391 556 aa9.84□□□□□ -0.83
PDGFC-202ENST00000422544 ATF6P18850 670 aa9.84□□□□□ -0.83
PDGFC-202ENST00000422544 HOXA9P31269 272 aa9.84□□□□□ -0.83
PDGFC-202ENST00000422544 GRIK1P39086 918 aa9.84□□□□□ -0.83
PDGFC-202ENST00000422544 MAGEA11P43364 429 aa9.84□□□□□ -0.83
PDGFC-202ENST00000422544 ZNF132P52740 706 aa9.84□□□□□ -0.83
PDGFC-202ENST00000422544 CACNA2D1P54289 1103 aa9.84□□□□□ -0.83
PDGFC-202ENST00000422544 EPHB3P54753 998 aa9.84□□□□□ -0.83
PDGFC-202ENST00000422544 POLR2FP61218 127 aaKnown RBP9.84□□□□□ -0.83
PDGFC-202ENST00000422544 RPL10AP62906 217 aaKnown RBP9.84□□□□□ -0.83
PDGFC-202ENST00000422544 NTHL1P78549 312 aa9.84□□□□□ -0.83
PDGFC-202ENST00000422544 PLCB2Q00722 1185 aa9.84□□□□□ -0.83
PDGFC-202ENST00000422544 PLD1Q13393 1074 aa9.84□□□□□ -0.83
PDGFC-202ENST00000422544 SMAD4Q13485 552 aaKnown RBP9.84□□□□□ -0.83
PDGFC-202ENST00000422544 VSTM1Q6UX27 236 aa9.84□□□□□ -0.83
PDGFC-202ENST00000422544 GRASPQ7Z6J2 395 aaPredicted RBP9.84□□□□□ -0.83
PDGFC-202ENST00000422544 DNAJB7Q7Z6W7 309 aaPredicted RBP9.84□□□□□ -0.83
PDGFC-202ENST00000422544 FAM35AQ86V20 835 aa9.84□□□□□ -0.83
PDGFC-202ENST00000422544 STKLD1Q8NE28 680 aa9.84□□□□□ -0.83
PDGFC-202ENST00000422544 TFAP2BQ92481 460 aa9.84□□□□□ -0.83
PDGFC-202ENST00000422544 SHC3Q92529 594 aa9.84□□□□□ -0.83
PDGFC-202ENST00000422544 ZNF512Q96ME7 567 aaPredicted RBP9.84□□□□□ -0.83
PDGFC-202ENST00000422544 KCNK16Q96T55 309 aa9.84□□□□□ -0.83
PDGFC-202ENST00000422544 HNRNPABQ99729 332 aaKnown RBP9.84□□□□□ -0.83
PDGFC-202ENST00000422544 STK33Q9BYT3 514 aa9.84□□□□□ -0.83
PDGFC-202ENST00000422544 XPO4Q9C0E2 1151 aaKnown RBP9.84□□□□□ -0.83
PDGFC-202ENST00000422544 GPR88Q9GZN0 384 aa9.84□□□□□ -0.83
PDGFC-202ENST00000422544 ACP6Q9NPH0 428 aa9.84□□□□□ -0.83
PDGFC-202ENST00000422544 NLRC4Q9NPP4 1024 aa9.84□□□□□ -0.83
PDGFC-202ENST00000422544 KRT82Q9NSB4 513 aa9.84□□□□□ -0.83
PDGFC-202ENST00000422544 TMEM30AQ9NV96 361 aa9.84□□□□□ -0.83
PDGFC-202ENST00000422544 HCFC1R1Q9NWW0 138 aa9.84□□□□□ -0.83
PDGFC-202ENST00000422544 DNMT3BQ9UBC3 853 aaKnown RBP9.84□□□□□ -0.83
PDGFC-202ENST00000422544 KIAA1257Q9ULG3 409 aa9.84□□□□□ -0.83
PDGFC-202ENST00000422544 USP15Q9Y4E8 981 aaPredicted RBP9.84□□□□□ -0.83
PDGFC-202ENST00000422544 ZNF292O60281 2723 aa9.84□□□□□ -0.83
PDGFC-202ENST00000422544 PLXNA3P51805 1871 aa9.84□□□□□ -0.83
PDGFC-202ENST00000422544 ATP8B3O60423 1300 aa9.83□□□□□ -0.84
PDGFC-202ENST00000422544 RIF1Q5UIP0 2472 aaKnown RBP9.83□□□□□ -0.84
PDGFC-202ENST00000422544 A0A1W2PQC6 194 aa9.83□□□□□ -0.84
PDGFC-202ENST00000422544 F8VP50 259 aa9.83□□□□□ -0.84
PDGFC-202ENST00000422544 MBTPS2O43462 519 aa9.83□□□□□ -0.84
PDGFC-202ENST00000422544 AP1G2O75843 785 aa9.83□□□□□ -0.84
PDGFC-202ENST00000422544 BEST1O76090 585 aa9.83□□□□□ -0.84
PDGFC-202ENST00000422544 PAPLNO95428 1278 aa9.83□□□□□ -0.84
PDGFC-202ENST00000422544 PTPN2P17706 415 aa9.83□□□□□ -0.84
PDGFC-202ENST00000422544 RFX1P22670 979 aa9.83□□□□□ -0.84
PDGFC-202ENST00000422544 BRD2P25440 801 aaKnown RBP9.83□□□□□ -0.84
PDGFC-202ENST00000422544 SSTR3P32745 418 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms