RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 A0A1W2PQ64 194 aa27.24■■□□□ 1.95
SMDT1-202ENST00000422252 A0A1W2PQD8 194 aa27.24■■□□□ 1.95
SMDT1-202ENST00000422252 LRRIQ3A6PVS8 624 aaPredicted RBP27.24■■□□□ 1.95
SMDT1-202ENST00000422252 GRIK1P39086 918 aa27.24■■□□□ 1.95
SMDT1-202ENST00000422252 CLDN10P78369 228 aa27.24■■□□□ 1.95
SMDT1-202ENST00000422252 TNK2Q07912 1038 aa27.24■■□□□ 1.95
SMDT1-202ENST00000422252 BIRC3Q13489 604 aa27.24■■□□□ 1.95
SMDT1-202ENST00000422252 MDH1BQ5I0G3 518 aa27.24■■□□□ 1.95
SMDT1-202ENST00000422252 TDRD10Q5VZ19 366 aaKnown RBP27.24■■□□□ 1.95
SMDT1-202ENST00000422252 MAMSTRQ6ZN01 415 aa27.24■■□□□ 1.95
SMDT1-202ENST00000422252 SPATA17Q96L03 361 aa27.24■■□□□ 1.95
SMDT1-202ENST00000422252 CEP295NLQ96MC4 621 aa27.24■■□□□ 1.95
SMDT1-202ENST00000422252 NXF1Q9UBU9 619 aaKnown RBP27.24■■□□□ 1.95
SMDT1-202ENST00000422252 PCDHGA2Q9Y5H1 932 aa27.24■■□□□ 1.95
SMDT1-202ENST00000422252 KINO60870 393 aaKnown RBP27.23■■□□□ 1.95
SMDT1-202ENST00000422252 NR3C1P04150 777 aa27.23■■□□□ 1.95
SMDT1-202ENST00000422252 PRR29P0C7W0 189 aa27.23■■□□□ 1.95
SMDT1-202ENST00000422252 LRRC32Q14392 662 aa27.23■■□□□ 1.95
SMDT1-202ENST00000422252 ZNF268Q14587 947 aaPredicted RBP27.23■■□□□ 1.95
SMDT1-202ENST00000422252 ITPRIPL2Q3MIP1 535 aa27.23■■□□□ 1.95
SMDT1-202ENST00000422252 TXNDC11Q6PKC3 985 aa27.23■■□□□ 1.95
SMDT1-202ENST00000422252 TSSK4Q6SA08 328 aa27.23■■□□□ 1.95
SMDT1-202ENST00000422252 FSIP1Q8NA03 581 aa27.23■■□□□ 1.95
SMDT1-202ENST00000422252 NELL1Q92832 810 aa27.23■■□□□ 1.95
SMDT1-202ENST00000422252 CCDC47Q96A33 483 aaKnown RBP27.23■■□□□ 1.95
SMDT1-202ENST00000422252 FAM83CQ9BQN1 747 aa27.23■■□□□ 1.95
SMDT1-202ENST00000422252 VRTNQ9H8Y1 702 aa27.23■■□□□ 1.95
SMDT1-202ENST00000422252 TRPC7Q9HCX4 862 aa27.23■■□□□ 1.95
SMDT1-202ENST00000422252 GKN1Q9NS71 199 aa27.23■■□□□ 1.95
SMDT1-202ENST00000422252 ZSCAN32Q9NX65 697 aa27.23■■□□□ 1.95
SMDT1-202ENST00000422252 PTPRZ1P23471 2315 aaPredicted RBP27.23■■□□□ 1.95
SMDT1-202ENST00000422252 RIF1Q5UIP0 2472 aaKnown RBP27.23■■□□□ 1.95
SMDT1-202ENST00000422252 KIF20AO95235 890 aa27.22■■□□□ 1.95
SMDT1-202ENST00000422252 PTPN1P18031 435 aaKnown RBP27.22■■□□□ 1.95
SMDT1-202ENST00000422252 ANXA13P27216 316 aa27.22■■□□□ 1.95
SMDT1-202ENST00000422252 ATRIPQ8WXE1 791 aa27.22■■□□□ 1.95
SMDT1-202ENST00000422252 DPEP3Q9H4B8 488 aa27.22■■□□□ 1.95
SMDT1-202ENST00000422252 KIF26AQ9ULI4 1882 aaPredicted RBP27.21■■□□□ 1.95
SMDT1-202ENST00000422252 FAM186AA6NE01 2351 aa27.21■■□□□ 1.95
SMDT1-202ENST00000422252 A8MXQ7 604 aa27.21■■□□□ 1.95
SMDT1-202ENST00000422252 TRIM66O15016 1216 aa27.21■■□□□ 1.95
SMDT1-202ENST00000422252 RHOBTB3O94955 611 aa27.21■■□□□ 1.95
SMDT1-202ENST00000422252 C4BPAP04003 597 aaKnown RBP27.21■■□□□ 1.95
SMDT1-202ENST00000422252 DPYDQ12882 1025 aa27.21■■□□□ 1.95
SMDT1-202ENST00000422252 NCOA4Q13772 614 aa27.21■■□□□ 1.95
SMDT1-202ENST00000422252 PPP2R5DQ14738 602 aa27.21■■□□□ 1.95
SMDT1-202ENST00000422252 ZNF699Q32M78 642 aa27.21■■□□□ 1.95
SMDT1-202ENST00000422252 KRBA2Q6ZNG9 492 aa27.21■■□□□ 1.95
SMDT1-202ENST00000422252 DENND5BQ6ZUT9 1274 aa27.21■■□□□ 1.95
SMDT1-202ENST00000422252 ZBTB44Q8NCP5 570 aa27.21■■□□□ 1.95
SMDT1-202ENST00000422252 GOLPH3LQ9H4A5 285 aa27.21■■□□□ 1.95
SMDT1-202ENST00000422252 TRAV19A0A0A6YYK7 116 aa27.2■■□□□ 1.94
SMDT1-202ENST00000422252 CALUO43852 315 aaPredicted RBP27.2■■□□□ 1.94
SMDT1-202ENST00000422252 CLSTN1O94985 981 aa27.2■■□□□ 1.94
SMDT1-202ENST00000422252 USP17L7P0C7H9 530 aa27.2■■□□□ 1.94
SMDT1-202ENST00000422252 CCR3P51677 355 aa27.2■■□□□ 1.94
SMDT1-202ENST00000422252 FAM160A1Q05DH4 1040 aa27.2■■□□□ 1.94
SMDT1-202ENST00000422252 PON2Q15165 354 aa27.2■■□□□ 1.94
SMDT1-202ENST00000422252 WDR44Q5JSH3 913 aa27.2■■□□□ 1.94
SMDT1-202ENST00000422252 DGKKQ5KSL6 1271 aa27.2■■□□□ 1.94
SMDT1-202ENST00000422252 CC2D1AQ6P1N0 951 aaPredicted RBP27.2■■□□□ 1.94
SMDT1-202ENST00000422252 RIN3Q8TB24 985 aa27.2■■□□□ 1.94
SMDT1-202ENST00000422252 FAM126AQ9BYI3 521 aaPredicted RBP27.2■■□□□ 1.94
SMDT1-202ENST00000422252 HPS4Q9NQG7 708 aa27.2■■□□□ 1.94
SMDT1-202ENST00000422252 RBM12Q9NTZ6 932 aaKnown RBP27.2■■□□□ 1.94
SMDT1-202ENST00000422252 TRAF3IP3Q9Y228 551 aa27.2■■□□□ 1.94
SMDT1-202ENST00000422252 ZNF638Q14966 1978 aaKnown RBP27.19■■□□□ 1.94
SMDT1-202ENST00000422252 DLG4P78352 724 aa27.19■■□□□ 1.94
SMDT1-202ENST00000422252 RUNX3Q13761 415 aa27.19■■□□□ 1.94
SMDT1-202ENST00000422252 GAS6Q14393 721 aa27.19■■□□□ 1.94
SMDT1-202ENST00000422252 ZNF667Q5HYK9 610 aa27.19■■□□□ 1.94
SMDT1-202ENST00000422252 CEP135Q66GS9 1140 aa27.19■■□□□ 1.94
SMDT1-202ENST00000422252 TRIM68Q6AZZ1 485 aa27.19■■□□□ 1.94
SMDT1-202ENST00000422252 SUMF1Q8NBK3 374 aa27.19■■□□□ 1.94
SMDT1-202ENST00000422252 B3GALNT2Q8NCR0 500 aa27.19■■□□□ 1.94
SMDT1-202ENST00000422252 TMC2Q8TDI7 906 aa27.19■■□□□ 1.94
SMDT1-202ENST00000422252 C8orf48Q96LL4 319 aa27.19■■□□□ 1.94
SMDT1-202ENST00000422252 SLC22A12Q96S37 553 aa27.19■■□□□ 1.94
SMDT1-202ENST00000422252 CYP2S1Q96SQ9 504 aa27.19■■□□□ 1.94
SMDT1-202ENST00000422252 EBF3Q9H4W6 596 aa27.19■■□□□ 1.94
SMDT1-202ENST00000422252 SMYD3Q9H7B4 428 aa27.19■■□□□ 1.94
SMDT1-202ENST00000422252 GDPD2Q9HCC8 539 aa27.19■■□□□ 1.94
SMDT1-202ENST00000422252 EHD2Q9NZN4 543 aa27.19■■□□□ 1.94
SMDT1-202ENST00000422252 FRMD4BQ9Y2L6 1034 aa27.19■■□□□ 1.94
SMDT1-202ENST00000422252 PTPRDP23468 1912 aa27.19■■□□□ 1.94
SMDT1-202ENST00000422252 F8VP50 259 aa27.18■■□□□ 1.94
SMDT1-202ENST00000422252 LILRB5O75023 590 aa27.18■■□□□ 1.94
SMDT1-202ENST00000422252 ZNF202O95125 648 aa27.18■■□□□ 1.94
SMDT1-202ENST00000422252 VNN1O95497 513 aa27.18■■□□□ 1.94
SMDT1-202ENST00000422252 CKMP06732 381 aa27.18■■□□□ 1.94
SMDT1-202ENST00000422252 TDGF1P13385 188 aa27.18■■□□□ 1.94
SMDT1-202ENST00000422252 USP46P62068 366 aa27.18■■□□□ 1.94
SMDT1-202ENST00000422252 SPEM1Q8N4L4 309 aa27.18■■□□□ 1.94
SMDT1-202ENST00000422252 TTLL2Q9BWV7 592 aa27.18■■□□□ 1.94
SMDT1-202ENST00000422252 ELOVL4Q9GZR5 314 aa27.18■■□□□ 1.94
SMDT1-202ENST00000422252 GCNT4Q9P109 453 aa27.18■■□□□ 1.94
SMDT1-202ENST00000422252 GREB1Q4ZG55 1949 aa27.18■■□□□ 1.94
SMDT1-202ENST00000422252 C2orf78A6NCI8 922 aa27.17■■□□□ 1.94
SMDT1-202ENST00000422252 CXCL12P48061 93 aa27.17■■□□□ 1.94
SMDT1-202ENST00000422252 NRLP54845 237 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms