RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 TRIM66O15016 1216 aa12.35□□□□□ -0.43
SQSTM1-203ENST00000422245 TACC1O75410 805 aa12.35□□□□□ -0.43
SQSTM1-203ENST00000422245 CKMP06732 381 aa12.35□□□□□ -0.43
SQSTM1-203ENST00000422245 FAM163BP0C2L3 166 aa12.35□□□□□ -0.43
SQSTM1-203ENST00000422245 USP17L7P0C7H9 530 aa12.35□□□□□ -0.43
SQSTM1-203ENST00000422245 TNNI1P19237 187 aa12.35□□□□□ -0.43
SQSTM1-203ENST00000422245 ANXA13P27216 316 aa12.35□□□□□ -0.43
SQSTM1-203ENST00000422245 TNNC1P63316 161 aa12.35□□□□□ -0.43
SQSTM1-203ENST00000422245 KCNB1Q14721 858 aa12.35□□□□□ -0.43
SQSTM1-203ENST00000422245 ZNF77Q15935 545 aa12.35□□□□□ -0.43
SQSTM1-203ENST00000422245 TMEM196Q5HYL7 178 aa12.35□□□□□ -0.43
SQSTM1-203ENST00000422245 DGLUCYQ7Z3D6 616 aa12.35□□□□□ -0.43
SQSTM1-203ENST00000422245 CEP57L1Q8IYX8 460 aa12.35□□□□□ -0.43
SQSTM1-203ENST00000422245 CPA6Q8N4T0 437 aa12.35□□□□□ -0.43
SQSTM1-203ENST00000422245 CCDC127Q96BQ5 260 aa12.35□□□□□ -0.43
SQSTM1-203ENST00000422245 MMS19Q96T76 1030 aa12.35□□□□□ -0.43
SQSTM1-203ENST00000422245 BLZF1Q9H2G9 400 aa12.35□□□□□ -0.43
SQSTM1-203ENST00000422245 SNX25Q9H3E2 840 aa12.35□□□□□ -0.43
SQSTM1-203ENST00000422245 EBF3Q9H4W6 596 aa12.35□□□□□ -0.43
SQSTM1-203ENST00000422245 CRTAC1Q9NQ79 661 aa12.35□□□□□ -0.43
SQSTM1-203ENST00000422245 DLL3Q9NYJ7 618 aa12.35□□□□□ -0.43
SQSTM1-203ENST00000422245 MAGEC2Q9UBF1 373 aaPredicted RBP12.35□□□□□ -0.43
SQSTM1-203ENST00000422245 CFAP45Q9UL16 551 aa12.35□□□□□ -0.43
SQSTM1-203ENST00000422245 PCDHA7Q9UN72 937 aa12.35□□□□□ -0.43
SQSTM1-203ENST00000422245 FRYLO94915 3013 aa12.35□□□□□ -0.43
SQSTM1-203ENST00000422245 DMXL1Q9Y485 3027 aa12.35□□□□□ -0.43
SQSTM1-203ENST00000422245 DCHS1Q96JQ0 3298 aa12.35□□□□□ -0.43
SQSTM1-203ENST00000422245 PTPRDP23468 1912 aa12.35□□□□□ -0.43
SQSTM1-203ENST00000422245 GREB1Q4ZG55 1949 aa12.35□□□□□ -0.43
SQSTM1-203ENST00000422245 PRR5-ARHGAP8B1AHC4 643 aa12.34□□□□□ -0.43
SQSTM1-203ENST00000422245 CHURC1-FNTBB4DL54 471 aa12.34□□□□□ -0.43
SQSTM1-203ENST00000422245 TRDMT1O14717 391 aaKnown RBP12.34□□□□□ -0.43
SQSTM1-203ENST00000422245 CLIC2O15247 247 aa12.34□□□□□ -0.43
SQSTM1-203ENST00000422245 LRP3O75074 770 aa12.34□□□□□ -0.43
SQSTM1-203ENST00000422245 ATG13O75143 517 aa12.34□□□□□ -0.43
SQSTM1-203ENST00000422245 ATP2C2O75185 946 aa12.34□□□□□ -0.43
SQSTM1-203ENST00000422245 STAU1O95793 577 aaKnown RBP12.34□□□□□ -0.43
SQSTM1-203ENST00000422245 ARSAP15289 507 aa12.34□□□□□ -0.43
SQSTM1-203ENST00000422245 TCF3P15923 654 aa12.34□□□□□ -0.43
SQSTM1-203ENST00000422245 PFKLP17858 780 aa12.34□□□□□ -0.43
SQSTM1-203ENST00000422245 LMO2P25791 158 aa12.34□□□□□ -0.43
SQSTM1-203ENST00000422245 FNTBP49356 437 aa12.34□□□□□ -0.43
SQSTM1-203ENST00000422245 ARHGAP8P85298 464 aa12.34□□□□□ -0.43
SQSTM1-203ENST00000422245 CYP27A1Q02318 531 aa12.34□□□□□ -0.43
SQSTM1-203ENST00000422245 TRPC3Q13507 836 aa12.34□□□□□ -0.43
SQSTM1-203ENST00000422245 KNOP1Q1ED39 458 aaKnown RBP12.34□□□□□ -0.43
SQSTM1-203ENST00000422245 FOXD4L6Q3SYB3 417 aaPredicted RBP12.34□□□□□ -0.43
SQSTM1-203ENST00000422245 TRIM68Q6AZZ1 485 aa12.34□□□□□ -0.43
SQSTM1-203ENST00000422245 FOXD4L3Q6VB84 417 aaPredicted RBP12.34□□□□□ -0.43
SQSTM1-203ENST00000422245 PRR23BQ6ZRT6 265 aa12.34□□□□□ -0.43
SQSTM1-203ENST00000422245 DENND5BQ6ZUT9 1274 aa12.34□□□□□ -0.43
SQSTM1-203ENST00000422245 RDH13Q8NBN7 331 aa12.34□□□□□ -0.43
SQSTM1-203ENST00000422245 RIN3Q8TB24 985 aa12.34□□□□□ -0.43
SQSTM1-203ENST00000422245 MYCBPAPQ8TBZ2 947 aa12.34□□□□□ -0.43
SQSTM1-203ENST00000422245 OSCP1Q8WVF1 389 aa12.34□□□□□ -0.43
SQSTM1-203ENST00000422245 ATP2A3Q93084 1043 aa12.34□□□□□ -0.43
SQSTM1-203ENST00000422245 PCED1BQ96HM7 432 aa12.34□□□□□ -0.43
SQSTM1-203ENST00000422245 USP18Q9UMW8 372 aa12.34□□□□□ -0.43
SQSTM1-203ENST00000422245 ARHGAP26Q9UNA1 814 aa12.34□□□□□ -0.43
SQSTM1-203ENST00000422245 HELZP42694 1942 aaKnown RBP12.34□□□□□ -0.43
SQSTM1-203ENST00000422245 ANAPC1Q9H1A4 1944 aa12.34□□□□□ -0.43
SQSTM1-203ENST00000422245 OTOL1A6NHN0 477 aaPredicted RBP12.33□□□□□ -0.44
SQSTM1-203ENST00000422245 EXOC3O60645 756 aa12.33□□□□□ -0.44
SQSTM1-203ENST00000422245 RETP07949 1114 aa12.33□□□□□ -0.44
SQSTM1-203ENST00000422245 PDGFRBP09619 1106 aa12.33□□□□□ -0.44
SQSTM1-203ENST00000422245 SLFN14P0C7P3 912 aa12.33□□□□□ -0.44
SQSTM1-203ENST00000422245 BDNFP23560 247 aa12.33□□□□□ -0.44
SQSTM1-203ENST00000422245 CASP1P29466 404 aa12.33□□□□□ -0.44
SQSTM1-203ENST00000422245 ATICP31939 592 aa12.33□□□□□ -0.44
SQSTM1-203ENST00000422245 GNL1P36915 607 aaPredicted RBP12.33□□□□□ -0.44
SQSTM1-203ENST00000422245 GRIK1P39086 918 aa12.33□□□□□ -0.44
SQSTM1-203ENST00000422245 AFMP43652 599 aa12.33□□□□□ -0.44
SQSTM1-203ENST00000422245 IFNAR2P48551 515 aa12.33□□□□□ -0.44
SQSTM1-203ENST00000422245 AP3M2P53677 418 aa12.33□□□□□ -0.44
SQSTM1-203ENST00000422245 DMWDQ09019 674 aa12.33□□□□□ -0.44
SQSTM1-203ENST00000422245 CUL4BQ13620 913 aa12.33□□□□□ -0.44
SQSTM1-203ENST00000422245 SIM2Q14190 667 aaPredicted RBP12.33□□□□□ -0.44
SQSTM1-203ENST00000422245 LPAL2Q16609 132 aa12.33□□□□□ -0.44
SQSTM1-203ENST00000422245 RSPO4Q2I0M5 234 aaPredicted RBP12.33□□□□□ -0.44
SQSTM1-203ENST00000422245 WDR72Q3MJ13 1102 aa12.33□□□□□ -0.44
SQSTM1-203ENST00000422245 FBXO43Q4G163 708 aa12.33□□□□□ -0.44
SQSTM1-203ENST00000422245 MDH1BQ5I0G3 518 aa12.33□□□□□ -0.44
SQSTM1-203ENST00000422245 FSTL4Q6MZW2 842 aa12.33□□□□□ -0.44
SQSTM1-203ENST00000422245 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.33□□□□□ -0.44
SQSTM1-203ENST00000422245 OR6B3Q8NGW1 331 aa12.33□□□□□ -0.44
SQSTM1-203ENST00000422245 SYAP1Q96A49 352 aaPredicted RBP12.33□□□□□ -0.44
SQSTM1-203ENST00000422245 CHFRQ96EP1 664 aa12.33□□□□□ -0.44
SQSTM1-203ENST00000422245 C8orf48Q96LL4 319 aa12.33□□□□□ -0.44
SQSTM1-203ENST00000422245 P2RY13Q9BPV8 354 aa12.33□□□□□ -0.44
SQSTM1-203ENST00000422245 MRPL45Q9BRJ2 306 aaKnown RBP12.33□□□□□ -0.44
SQSTM1-203ENST00000422245 TTLL2Q9BWV7 592 aa12.33□□□□□ -0.44
SQSTM1-203ENST00000422245 ELOVL4Q9GZR5 314 aa12.33□□□□□ -0.44
SQSTM1-203ENST00000422245 GZF1Q9H116 711 aaPredicted RBP12.33□□□□□ -0.44
SQSTM1-203ENST00000422245 SLC39A2Q9NP94 309 aa12.33□□□□□ -0.44
SQSTM1-203ENST00000422245 EXOC1Q9NV70 894 aa12.33□□□□□ -0.44
SQSTM1-203ENST00000422245 DUS2Q9NX74 493 aaKnown RBP12.33□□□□□ -0.44
SQSTM1-203ENST00000422245 TRPM5Q9NZQ8 1165 aa12.33□□□□□ -0.44
SQSTM1-203ENST00000422245 GCNT4Q9P109 453 aa12.33□□□□□ -0.44
SQSTM1-203ENST00000422245 CCDC163A0A0D9SF12 145 aa12.32□□□□□ -0.44
SQSTM1-203ENST00000422245 C2orf78A6NCI8 922 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms