RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 RAD54LQ92698 747 aa7.58□□□□□ -1.2
HMGN1-205ENST00000419378 TP53INP1Q96A56 240 aa7.58□□□□□ -1.2
HMGN1-205ENST00000419378 IGSF21Q96ID5 467 aa7.58□□□□□ -1.2
HMGN1-205ENST00000419378 EPSTI1Q96J88 318 aa7.58□□□□□ -1.2
HMGN1-205ENST00000419378 CLIC6Q96NY7 704 aa7.58□□□□□ -1.2
HMGN1-205ENST00000419378 FAM193BQ96PV7 902 aaPredicted RBP7.58□□□□□ -1.2
HMGN1-205ENST00000419378 REEP2Q9BRK0 252 aa7.58□□□□□ -1.2
HMGN1-205ENST00000419378 ADPGKQ9BRR6 497 aa7.58□□□□□ -1.2
HMGN1-205ENST00000419378 TMEM175Q9BSA9 504 aa7.58□□□□□ -1.2
HMGN1-205ENST00000419378 CCSER1Q9C0I3 900 aa7.58□□□□□ -1.2
HMGN1-205ENST00000419378 TLE6Q9H808 572 aa7.58□□□□□ -1.2
HMGN1-205ENST00000419378 C17orf75Q9HAS0 396 aa7.58□□□□□ -1.2
HMGN1-205ENST00000419378 KMT5AQ9NQR1 393 aa7.58□□□□□ -1.2
HMGN1-205ENST00000419378 ENTPD7Q9NQZ7 604 aa7.58□□□□□ -1.2
HMGN1-205ENST00000419378 C1GALT1Q9NS00 363 aa7.58□□□□□ -1.2
HMGN1-205ENST00000419378 PCDHB10Q9UN67 800 aa7.58□□□□□ -1.2
HMGN1-205ENST00000419378 GIT1Q9Y2X7 761 aa7.58□□□□□ -1.2
HMGN1-205ENST00000419378 SRPRBQ9Y5M8 271 aaKnown RBP7.58□□□□□ -1.2
HMGN1-205ENST00000419378 TDRD15B5MCY1 1934 aaKnown RBP7.58□□□□□ -1.2
HMGN1-205ENST00000419378 MYH11P35749 1972 aa7.57□□□□□ -1.2
HMGN1-205ENST00000419378 TCF20Q9UGU0 1960 aaKnown RBP7.57□□□□□ -1.2
HMGN1-205ENST00000419378 HIDE1A8MVS5 230 aa7.57□□□□□ -1.2
HMGN1-205ENST00000419378 NRP1O14786 923 aa7.57□□□□□ -1.2
HMGN1-205ENST00000419378 PER2O15055 1255 aa7.57□□□□□ -1.2
HMGN1-205ENST00000419378 SLC16A4O15374 487 aa7.57□□□□□ -1.2
HMGN1-205ENST00000419378 RECQL4O94761 1208 aa7.57□□□□□ -1.2
HMGN1-205ENST00000419378 SLITRK5O94991 958 aa7.57□□□□□ -1.2
HMGN1-205ENST00000419378 GLP2RO95838 553 aa7.57□□□□□ -1.2
HMGN1-205ENST00000419378 ZSCAN22P10073 491 aaPredicted RBP7.57□□□□□ -1.2
HMGN1-205ENST00000419378 IL9P15248 144 aa7.57□□□□□ -1.2
HMGN1-205ENST00000419378 CCNFP41002 786 aa7.57□□□□□ -1.2
HMGN1-205ENST00000419378 NCKAP1LP55160 1127 aa7.57□□□□□ -1.2
HMGN1-205ENST00000419378 DLX2Q07687 328 aaPredicted RBP7.57□□□□□ -1.2
HMGN1-205ENST00000419378 DSC1Q08554 894 aa7.57□□□□□ -1.2
HMGN1-205ENST00000419378 GRIK3Q13003 919 aa7.57□□□□□ -1.2
HMGN1-205ENST00000419378 PKP1Q13835 747 aa7.57□□□□□ -1.2
HMGN1-205ENST00000419378 DHX8Q14562 1220 aaKnown RBP7.57□□□□□ -1.2
HMGN1-205ENST00000419378 SMC1AQ14683 1233 aaKnown RBP7.57□□□□□ -1.2
HMGN1-205ENST00000419378 DUSP6Q16828 381 aa7.57□□□□□ -1.2
HMGN1-205ENST00000419378 ZNF568Q3ZCX4 644 aa7.57□□□□□ -1.2
HMGN1-205ENST00000419378 ATF7IP2Q5U623 682 aa7.57□□□□□ -1.2
HMGN1-205ENST00000419378 LETMD1Q6P1Q0 360 aa7.57□□□□□ -1.2
HMGN1-205ENST00000419378 C6orf15Q6UXA7 325 aaPredicted RBP7.57□□□□□ -1.2
HMGN1-205ENST00000419378 RBM23Q86U06 439 aaKnown RBP7.57□□□□□ -1.2
HMGN1-205ENST00000419378 CDH24Q86UP0 819 aa7.57□□□□□ -1.2
HMGN1-205ENST00000419378 COLGALT2Q8IYK4 626 aa7.57□□□□□ -1.2
HMGN1-205ENST00000419378 VPS52Q8N1B4 723 aa7.57□□□□□ -1.2
HMGN1-205ENST00000419378 EFHBQ8N7U6 833 aa7.57□□□□□ -1.2
HMGN1-205ENST00000419378 LINC00301Q8NCQ3 95 aa7.57□□□□□ -1.2
HMGN1-205ENST00000419378 TMEM161BQ8NDZ6 487 aa7.57□□□□□ -1.2
HMGN1-205ENST00000419378 GSTCDQ8NEC7 633 aa7.57□□□□□ -1.2
HMGN1-205ENST00000419378 VN1R2Q8NFZ6 395 aa7.57□□□□□ -1.2
HMGN1-205ENST00000419378 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.57□□□□□ -1.2
HMGN1-205ENST00000419378 RIN3Q8TB24 985 aa7.57□□□□□ -1.2
HMGN1-205ENST00000419378 LARP4BQ92615 738 aaKnown RBP7.57□□□□□ -1.2
HMGN1-205ENST00000419378 SLC6A18Q96N87 628 aa7.57□□□□□ -1.2
HMGN1-205ENST00000419378 RPS6KC1Q96S38 1066 aa7.57□□□□□ -1.2
HMGN1-205ENST00000419378 SRPK1Q96SB4 655 aaKnown RBP7.57□□□□□ -1.2
HMGN1-205ENST00000419378 UHRF1Q96T88 793 aaPredicted RBP7.57□□□□□ -1.2
HMGN1-205ENST00000419378 NTPCRQ9BSD7 190 aaKnown RBP7.57□□□□□ -1.2
HMGN1-205ENST00000419378 TARS2Q9BW92 718 aaKnown RBP7.57□□□□□ -1.2
HMGN1-205ENST00000419378 VN1R3Q9BXE9 311 aa7.57□□□□□ -1.2
HMGN1-205ENST00000419378 MRPL4Q9BYD3 311 aaKnown RBP7.57□□□□□ -1.2
HMGN1-205ENST00000419378 ZBP1Q9H171 429 aa7.57□□□□□ -1.2
HMGN1-205ENST00000419378 CDT1Q9H211 546 aa7.57□□□□□ -1.2
HMGN1-205ENST00000419378 NGRNQ9NPE2 291 aaKnown RBP7.57□□□□□ -1.2
HMGN1-205ENST00000419378 MARCH5Q9NX47 278 aa7.57□□□□□ -1.2
HMGN1-205ENST00000419378 MIOSQ9NXC5 875 aa7.57□□□□□ -1.2
HMGN1-205ENST00000419378 SNTG2Q9NY99 539 aa7.57□□□□□ -1.2
HMGN1-205ENST00000419378 CCDC39Q9UFE4 941 aa7.57□□□□□ -1.2
HMGN1-205ENST00000419378 ODF2LQ9ULJ1 636 aa7.57□□□□□ -1.2
HMGN1-205ENST00000419378 MAPK8IP1Q9UQF2 711 aa7.57□□□□□ -1.2
HMGN1-205ENST00000419378 TNFSF13BQ9Y275 285 aa7.57□□□□□ -1.2
HMGN1-205ENST00000419378 PRG3Q9Y2Y8 225 aaPredicted RBP7.57□□□□□ -1.2
HMGN1-205ENST00000419378 FSD2A1L4K1 749 aa7.56□□□□□ -1.2
HMGN1-205ENST00000419378 HMX2A2RU54 273 aa7.56□□□□□ -1.2
HMGN1-205ENST00000419378 C2orf71A6NGG8 1288 aa7.56□□□□□ -1.2
HMGN1-205ENST00000419378 F8W810 466 aa7.56□□□□□ -1.2
HMGN1-205ENST00000419378 K7ENM7 598 aa7.56□□□□□ -1.2
HMGN1-205ENST00000419378 ABLIM1O14639 778 aa7.56□□□□□ -1.2
HMGN1-205ENST00000419378 SPTLC2O15270 562 aa7.56□□□□□ -1.2
HMGN1-205ENST00000419378 TBCAO75347 108 aaKnown RBP7.56□□□□□ -1.2
HMGN1-205ENST00000419378 GJB6O95452 261 aa7.56□□□□□ -1.2
HMGN1-205ENST00000419378 YEATS4O95619 227 aa7.56□□□□□ -1.2
HMGN1-205ENST00000419378 ALDH2P05091 517 aa7.56□□□□□ -1.2
HMGN1-205ENST00000419378 ITGB2P05107 769 aa7.56□□□□□ -1.2
HMGN1-205ENST00000419378 KRT18P05783 430 aaKnown RBP7.56□□□□□ -1.2
HMGN1-205ENST00000419378 PROZP22891 400 aa7.56□□□□□ -1.2
HMGN1-205ENST00000419378 DDIT3P35638 169 aa7.56□□□□□ -1.2
HMGN1-205ENST00000419378 OR1G1P47890 313 aa7.56□□□□□ -1.2
HMGN1-205ENST00000419378 NDUFV1P49821 464 aa7.56□□□□□ -1.2
HMGN1-205ENST00000419378 ZNF131P52739 623 aa7.56□□□□□ -1.2
HMGN1-205ENST00000419378 RBM10P98175 930 aaKnown RBP7.56□□□□□ -1.2
HMGN1-205ENST00000419378 STRN3Q13033 797 aa7.56□□□□□ -1.2
HMGN1-205ENST00000419378 ADAM15Q13444 863 aa7.56□□□□□ -1.2
HMGN1-205ENST00000419378 TUSC3Q13454 348 aa7.56□□□□□ -1.2
HMGN1-205ENST00000419378 STK38Q15208 465 aa7.56□□□□□ -1.2
HMGN1-205ENST00000419378 CLUL1Q15846 466 aa7.56□□□□□ -1.2
HMGN1-205ENST00000419378 VHLLQ6RSH7 139 aa7.56□□□□□ -1.2
HMGN1-205ENST00000419378 APBB1IPQ7Z5R6 666 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms