RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 UNC93AQ86WB7 457 aa11.21□□□□□ -0.61
RFC1-203ENST00000418436 TMC8Q8IU68 726 aa11.21□□□□□ -0.61
RFC1-203ENST00000418436 CRYBG2Q8N1P7 616 aa11.21□□□□□ -0.61
RFC1-203ENST00000418436 ELMOD1Q8N336 334 aa11.21□□□□□ -0.61
RFC1-203ENST00000418436 TDRD5Q8NAT2 981 aaKnown RBP11.21□□□□□ -0.61
RFC1-203ENST00000418436 LEMD2Q8NC56 503 aa11.21□□□□□ -0.61
RFC1-203ENST00000418436 CCDC150Q8NCX0 1101 aa11.21□□□□□ -0.61
RFC1-203ENST00000418436 ITFG1Q8TB96 612 aa11.21□□□□□ -0.61
RFC1-203ENST00000418436 PSMG2Q969U7 264 aa11.21□□□□□ -0.61
RFC1-203ENST00000418436 MYLPFQ96A32 169 aa11.21□□□□□ -0.61
RFC1-203ENST00000418436 THAP11Q96EK4 314 aa11.21□□□□□ -0.61
RFC1-203ENST00000418436 PCED1BQ96HM7 432 aa11.21□□□□□ -0.61
RFC1-203ENST00000418436 NIF3L1Q9GZT8 377 aa11.21□□□□□ -0.61
RFC1-203ENST00000418436 DPEP3Q9H4B8 488 aa11.21□□□□□ -0.61
RFC1-203ENST00000418436 THAP9Q9H5L6 903 aa11.21□□□□□ -0.61
RFC1-203ENST00000418436 FAM124BQ9H5Z6 455 aaPredicted RBP11.21□□□□□ -0.61
RFC1-203ENST00000418436 ZFP37Q9Y6Q3 630 aaPredicted RBP11.21□□□□□ -0.61
RFC1-203ENST00000418436 OBSL1O75147 1896 aa11.21□□□□□ -0.62
RFC1-203ENST00000418436 MOSPD3O75425 235 aa11.2□□□□□ -0.62
RFC1-203ENST00000418436 LAMP2P13473 410 aa11.2□□□□□ -0.62
RFC1-203ENST00000418436 SP100P23497 879 aaPredicted RBP11.2□□□□□ -0.62
RFC1-203ENST00000418436 CYP2F1P24903 491 aa11.2□□□□□ -0.62
RFC1-203ENST00000418436 CCR2P41597 374 aa11.2□□□□□ -0.62
RFC1-203ENST00000418436 CDR1P51861 262 aa11.2□□□□□ -0.62
RFC1-203ENST00000418436 WDR44Q5JSH3 913 aa11.2□□□□□ -0.62
RFC1-203ENST00000418436 SASS6Q6UVJ0 657 aa11.2□□□□□ -0.62
RFC1-203ENST00000418436 VSTM1Q6UX27 236 aa11.2□□□□□ -0.62
RFC1-203ENST00000418436 GET4Q7L5D6 327 aaPredicted RBP11.2□□□□□ -0.62
RFC1-203ENST00000418436 DNAJB7Q7Z6W7 309 aaPredicted RBP11.2□□□□□ -0.62
RFC1-203ENST00000418436 ITIH5Q86UX2 942 aa11.2□□□□□ -0.62
RFC1-203ENST00000418436 SPATA2LQ8IUW3 424 aaPredicted RBP11.2□□□□□ -0.62
RFC1-203ENST00000418436 B3GALNT2Q8NCR0 500 aa11.2□□□□□ -0.62
RFC1-203ENST00000418436 LMO3Q8TAP4 145 aa11.2□□□□□ -0.62
RFC1-203ENST00000418436 FGF13Q92913 245 aa11.2□□□□□ -0.62
RFC1-203ENST00000418436 TNIP3Q96KP6 325 aa11.2□□□□□ -0.62
RFC1-203ENST00000418436 CNOT6LQ96LI5 555 aaKnown RBP11.2□□□□□ -0.62
RFC1-203ENST00000418436 SEPT5Q99719 369 aaPredicted RBP11.2□□□□□ -0.62
RFC1-203ENST00000418436 LPIN3Q9BQK8 851 aa11.2□□□□□ -0.62
RFC1-203ENST00000418436 CORO1BQ9BR76 489 aa11.2□□□□□ -0.62
RFC1-203ENST00000418436 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.2□□□□□ -0.621e-7■■■■■ 115.4
RFC1-203ENST00000418436 MAGEC2Q9UBF1 373 aaPredicted RBP11.2□□□□□ -0.62
RFC1-203ENST00000418436 CDH7Q9ULB5 785 aa11.2□□□□□ -0.62
RFC1-203ENST00000418436 MRPS23Q9Y3D9 190 aaKnown RBP11.2□□□□□ -0.62
RFC1-203ENST00000418436 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.2□□□□□ -0.62
RFC1-203ENST00000418436 PI4K2BG5E9Z4 385 aa11.19□□□□□ -0.62
RFC1-203ENST00000418436 NRG2O14511 850 aaPredicted RBP11.19□□□□□ -0.62
RFC1-203ENST00000418436 ZNF197O14709 1029 aa11.19□□□□□ -0.62
RFC1-203ENST00000418436 CILPO75339 1184 aa11.19□□□□□ -0.62
RFC1-203ENST00000418436 CLSTN1O94985 981 aa11.19□□□□□ -0.62
RFC1-203ENST00000418436 AFPP02771 609 aaKnown RBP11.19□□□□□ -0.62
RFC1-203ENST00000418436 HMGA1P17096 107 aaKnown RBP11.19□□□□□ -0.62
RFC1-203ENST00000418436 GBP2P32456 591 aaPredicted RBP11.19□□□□□ -0.62
RFC1-203ENST00000418436 GPR15P49685 360 aa11.19□□□□□ -0.62
RFC1-203ENST00000418436 NDST1P52848 882 aa11.19□□□□□ -0.62
RFC1-203ENST00000418436 RPL10AP62906 217 aaKnown RBP11.19□□□□□ -0.62
RFC1-203ENST00000418436 KLHL40Q2TBA0 621 aa11.19□□□□□ -0.62
RFC1-203ENST00000418436 MDH1BQ5I0G3 518 aa11.19□□□□□ -0.62
RFC1-203ENST00000418436 CYP4A22Q5TCH4 519 aa11.19□□□□□ -0.62
RFC1-203ENST00000418436 PAQR9Q6ZVX9 377 aa11.19□□□□□ -0.62
RFC1-203ENST00000418436 PDZD4Q76G19 769 aaPredicted RBP11.19□□□□□ -0.62
RFC1-203ENST00000418436 NPAS3Q8IXF0 933 aa11.19□□□□□ -0.62
RFC1-203ENST00000418436 TTC39CQ8N584 583 aa11.19□□□□□ -0.62
RFC1-203ENST00000418436 EHBP1Q8NDI1 1231 aa11.19□□□□□ -0.62
RFC1-203ENST00000418436 ENOX1Q8TC92 643 aaKnown RBP11.19□□□□□ -0.62
RFC1-203ENST00000418436 WHAMMQ8TF30 809 aa11.19□□□□□ -0.62
RFC1-203ENST00000418436 TCEAL4Q96EI5 215 aa11.19□□□□□ -0.62
RFC1-203ENST00000418436 CEP295NLQ96MC4 621 aa11.19□□□□□ -0.62
RFC1-203ENST00000418436 TWNKQ96RR1 684 aa11.19□□□□□ -0.62
RFC1-203ENST00000418436 B3GNT5Q9BYG0 378 aa11.19□□□□□ -0.62
RFC1-203ENST00000418436 ZNF334Q9HCZ1 680 aaPredicted RBP11.19□□□□□ -0.62
RFC1-203ENST00000418436 ASAH2Q9NR71 780 aa11.19□□□□□ -0.62
RFC1-203ENST00000418436 ANO10Q9NW15 660 aa11.19□□□□□ -0.62
RFC1-203ENST00000418436 LIMD1Q9UGP4 676 aa11.19□□□□□ -0.62
RFC1-203ENST00000418436 HMGXB4Q9UGU5 601 aa11.19□□□□□ -0.62
RFC1-203ENST00000418436 ZNF638Q14966 1978 aaKnown RBP11.19□□□□□ -0.62
RFC1-203ENST00000418436 ANHXE9PGG2 379 aa11.18□□□□□ -0.62
RFC1-203ENST00000418436 NOL4O94818 638 aa11.18□□□□□ -0.62
RFC1-203ENST00000418436 MYL4P12829 197 aa11.18□□□□□ -0.62
RFC1-203ENST00000418436 CEBPBP17676 345 aa11.18□□□□□ -0.62
RFC1-203ENST00000418436 PTMSP20962 102 aa11.18□□□□□ -0.62
RFC1-203ENST00000418436 BDNFP23560 247 aa11.18□□□□□ -0.62
RFC1-203ENST00000418436 CYP27A1Q02318 531 aa11.18□□□□□ -0.62
RFC1-203ENST00000418436 CETN1Q12798 172 aa11.18□□□□□ -0.62
RFC1-203ENST00000418436 CUL2Q13617 745 aa11.18□□□□□ -0.62
RFC1-203ENST00000418436 VEPH1Q14D04 833 aa11.18□□□□□ -0.62
RFC1-203ENST00000418436 LAPTM4AQ15012 233 aa11.18□□□□□ -0.62
RFC1-203ENST00000418436 STX1AQ16623 288 aa11.18□□□□□ -0.62
RFC1-203ENST00000418436 PTPN21Q16825 1174 aa11.18□□□□□ -0.62
RFC1-203ENST00000418436 DDR2Q16832 855 aa11.18□□□□□ -0.62
RFC1-203ENST00000418436 TPD52L1Q16890 204 aaPredicted RBP11.18□□□□□ -0.62
RFC1-203ENST00000418436 ACOT1Q86TX2 421 aa11.18□□□□□ -0.62
RFC1-203ENST00000418436 FAM114A1Q8IWE2 563 aa11.18□□□□□ -0.62
RFC1-203ENST00000418436 FUKQ8N0W3 1084 aa11.18□□□□□ -0.62
RFC1-203ENST00000418436 UBR7Q8N806 425 aa11.18□□□□□ -0.62
RFC1-203ENST00000418436 SHKBP1Q8TBC3 707 aa11.18□□□□□ -0.62
RFC1-203ENST00000418436 FAM200AQ8TCP9 573 aa11.18□□□□□ -0.62
RFC1-203ENST00000418436 GIPC2Q8TF65 315 aa11.18□□□□□ -0.62
RFC1-203ENST00000418436 NXPE3Q969Y0 559 aa11.18□□□□□ -0.62
RFC1-203ENST00000418436 SPATA17Q96L03 361 aa11.18□□□□□ -0.62
RFC1-203ENST00000418436 C8orf48Q96LL4 319 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms