RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 FAM213AQ9BRX8 229 aa16.52■□□□□ 0.24
DDX56-202ENST00000415758 LINC00597Q9H2U6 94 aa16.52■□□□□ 0.24
DDX56-202ENST00000415758 TRPC7Q9HCX4 862 aa16.52■□□□□ 0.24
DDX56-202ENST00000415758 ITGA11Q9UKX5 1188 aa16.52■□□□□ 0.24
DDX56-202ENST00000415758 ARHGAP26Q9UNA1 814 aa16.52■□□□□ 0.24
DDX56-202ENST00000415758 EXOC7Q9UPT5 735 aa16.52■□□□□ 0.24
DDX56-202ENST00000415758 PTPRDP23468 1912 aa16.51■□□□□ 0.23
DDX56-202ENST00000415758 HELZP42694 1942 aaKnown RBP16.51■□□□□ 0.23
DDX56-202ENST00000415758 C2orf78A6NCI8 922 aa16.51■□□□□ 0.23
DDX56-202ENST00000415758 K7EQS6 105 aa16.51■□□□□ 0.23
DDX56-202ENST00000415758 CDX4O14627 284 aaPredicted RBP16.51■□□□□ 0.23
DDX56-202ENST00000415758 GIPC1O14908 333 aa16.51■□□□□ 0.23
DDX56-202ENST00000415758 LDHAP00338 332 aaKnown RBP16.51■□□□□ 0.23
DDX56-202ENST00000415758 CEACAM1P13688 526 aa16.51■□□□□ 0.23
DDX56-202ENST00000415758 HDCP19113 662 aa16.51■□□□□ 0.23
DDX56-202ENST00000415758 CSRP1P21291 193 aaKnown RBP16.51■□□□□ 0.23
DDX56-202ENST00000415758 PCSK1P29120 753 aa16.51■□□□□ 0.23
DDX56-202ENST00000415758 GBP1P32455 592 aa16.51■□□□□ 0.23
DDX56-202ENST00000415758 OPRD1P41143 372 aa16.51■□□□□ 0.23
DDX56-202ENST00000415758 KCNA1Q09470 495 aa16.51■□□□□ 0.23
DDX56-202ENST00000415758 PSMD2Q13200 908 aa16.51■□□□□ 0.23
DDX56-202ENST00000415758 ERICH6BQ5W0A0 696 aa16.51■□□□□ 0.23
DDX56-202ENST00000415758 DPH6Q7L8W6 267 aa16.51■□□□□ 0.23
DDX56-202ENST00000415758 LIMS2Q7Z4I7 341 aa16.51■□□□□ 0.23
DDX56-202ENST00000415758 KDF1Q8NAX2 398 aaPredicted RBP16.51■□□□□ 0.23
DDX56-202ENST00000415758 RASSF8Q8NHQ8 419 aa16.51■□□□□ 0.23
DDX56-202ENST00000415758 SH3RF2Q8TEC5 729 aa16.51■□□□□ 0.23
DDX56-202ENST00000415758 SPATA17Q96L03 361 aa16.51■□□□□ 0.23
DDX56-202ENST00000415758 CNOT6LQ96LI5 555 aaKnown RBP16.51■□□□□ 0.23
DDX56-202ENST00000415758 NFATC1O95644 943 aa16.5■□□□□ 0.23
DDX56-202ENST00000415758 GARTP22102 1010 aa16.5■□□□□ 0.23
DDX56-202ENST00000415758 PDE6CP51160 858 aa16.5■□□□□ 0.23
DDX56-202ENST00000415758 RBP5P82980 135 aa16.5■□□□□ 0.23
DDX56-202ENST00000415758 ZXDBP98169 803 aa16.5■□□□□ 0.23
DDX56-202ENST00000415758 KCNB1Q14721 858 aa16.5■□□□□ 0.23
DDX56-202ENST00000415758 SOWAHAQ2M3V2 549 aa16.5■□□□□ 0.23
DDX56-202ENST00000415758 GAB4Q2WGN9 574 aa16.5■□□□□ 0.23
DDX56-202ENST00000415758 L1TD1Q5T7N2 865 aaKnown RBP16.5■□□□□ 0.23
DDX56-202ENST00000415758 SH3PXD2AQ5TCZ1 1133 aa16.5■□□□□ 0.23
DDX56-202ENST00000415758 SCARA3Q6AZY7 606 aa16.5■□□□□ 0.23
DDX56-202ENST00000415758 UNQ6494/PRO21346Q6UXR6 183 aa16.5■□□□□ 0.23
DDX56-202ENST00000415758 DYMQ7RTS9 669 aa16.5■□□□□ 0.23
DDX56-202ENST00000415758 OSTM1Q86WC4 334 aa16.5■□□□□ 0.23
DDX56-202ENST00000415758 SPATA2LQ8IUW3 424 aaPredicted RBP16.5■□□□□ 0.23
DDX56-202ENST00000415758 CSGALNACT2Q8N6G5 542 aa16.5■□□□□ 0.23
DDX56-202ENST00000415758 ZSWIM2Q8NEG5 633 aa16.5■□□□□ 0.23
DDX56-202ENST00000415758 OLIG1Q8TAK6 271 aa16.5■□□□□ 0.23
DDX56-202ENST00000415758 TMX3Q96JJ7 454 aa16.5■□□□□ 0.23
DDX56-202ENST00000415758 ACCSQ96QU6 501 aa16.5■□□□□ 0.23
DDX56-202ENST00000415758 TMEM121BQ9BXQ6 578 aaPredicted RBP16.5■□□□□ 0.23
DDX56-202ENST00000415758 MRPL44Q9H9J2 332 aaKnown RBP16.5■□□□□ 0.23
DDX56-202ENST00000415758 TMEM9BQ9NQ34 198 aa16.5■□□□□ 0.23
DDX56-202ENST00000415758 RBAKQ9NYW8 714 aaPredicted RBP16.5■□□□□ 0.23
DDX56-202ENST00000415758 MMP17Q9ULZ9 603 aa16.5■□□□□ 0.23
DDX56-202ENST00000415758 SNX9Q9Y5X1 595 aa16.5■□□□□ 0.23
DDX56-202ENST00000415758 ZZEF1O43149 2961 aa16.49■□□□□ 0.23
DDX56-202ENST00000415758 C1QTNF9BB2RNN3 333 aa16.49■□□□□ 0.23
DDX56-202ENST00000415758 C1QTNF9P0C862 333 aa16.49■□□□□ 0.23
DDX56-202ENST00000415758 GAP43P17677 238 aa16.49■□□□□ 0.23
DDX56-202ENST00000415758 MRPS21P82921 87 aaKnown RBP16.49■□□□□ 0.23
DDX56-202ENST00000415758 ZNF252P-AS1Q0IIN9 211 aa16.49■□□□□ 0.23
DDX56-202ENST00000415758 RABEP1Q15276 862 aa16.49■□□□□ 0.23
DDX56-202ENST00000415758 SF3A1Q15459 793 aaKnown RBP16.49■□□□□ 0.23
DDX56-202ENST00000415758 CRY1Q16526 586 aa16.49■□□□□ 0.23
DDX56-202ENST00000415758 C2orf27AQ580R0 203 aa16.49■□□□□ 0.23
DDX56-202ENST00000415758 VSTM1Q6UX27 236 aa16.49■□□□□ 0.23
DDX56-202ENST00000415758 C4orf50Q6ZRC1 276 aa16.49■□□□□ 0.23
DDX56-202ENST00000415758 BRAPQ7Z569 592 aa16.49■□□□□ 0.23
DDX56-202ENST00000415758 ADGRF2Q8IZF7 708 aa16.49■□□□□ 0.23
DDX56-202ENST00000415758 ADGRG2Q8IZP9 1017 aa16.49■□□□□ 0.23
DDX56-202ENST00000415758 DNAJC19Q96DA6 116 aa16.49■□□□□ 0.23
DDX56-202ENST00000415758 SAAL1Q96ER3 474 aa16.49■□□□□ 0.23
DDX56-202ENST00000415758 TPSD1Q9BZJ3 242 aa16.49■□□□□ 0.23
DDX56-202ENST00000415758 OLFML3Q9NRN5 406 aa16.49■□□□□ 0.23
DDX56-202ENST00000415758 STK17AQ9UEE5 414 aa16.49■□□□□ 0.23
DDX56-202ENST00000415758 SIX4Q9UIU6 781 aa16.49■□□□□ 0.23
DDX56-202ENST00000415758 ZMIZ1Q9ULJ6 1067 aa16.49■□□□□ 0.23
DDX56-202ENST00000415758 INVSQ9Y283 1065 aa16.49■□□□□ 0.23
DDX56-202ENST00000415758 ASCC3Q8N3C0 2202 aaKnown RBP16.48■□□□□ 0.23
DDX56-202ENST00000415758 A0A0A0MRY4 1105 aa16.48■□□□□ 0.23
DDX56-202ENST00000415758 IRX4P78413 519 aa16.48■□□□□ 0.23
DDX56-202ENST00000415758 CCDC142Q17RM4 750 aa16.48■□□□□ 0.23
DDX56-202ENST00000415758 USP49Q70CQ1 688 aa16.48■□□□□ 0.23
DDX56-202ENST00000415758 SCN4BQ8IWT1 228 aa16.48■□□□□ 0.23
DDX56-202ENST00000415758 TTC16Q8NEE8 873 aa16.48■□□□□ 0.23
DDX56-202ENST00000415758 MDGA1Q8NFP4 955 aa16.48■□□□□ 0.23
DDX56-202ENST00000415758 EPSTI1Q96J88 318 aa16.48■□□□□ 0.23
DDX56-202ENST00000415758 MAGEC2Q9UBF1 373 aaPredicted RBP16.48■□□□□ 0.23
DDX56-202ENST00000415758 EVLQ9UI08 416 aaPredicted RBP16.48■□□□□ 0.23
DDX56-202ENST00000415758 PCDHB13Q9Y5F0 798 aa16.48■□□□□ 0.23
DDX56-202ENST00000415758 PCNX2A6NKB5 2137 aa16.48■□□□□ 0.23
DDX56-202ENST00000415758 WDFY3Q8IZQ1 3526 aa16.47■□□□□ 0.23
DDX56-202ENST00000415758 TMEM8BA6NDV4 472 aa16.47■□□□□ 0.23
DDX56-202ENST00000415758 MYMKA6NI61 221 aa16.47■□□□□ 0.23
DDX56-202ENST00000415758 PATE3B3GLJ2 98 aa16.47■□□□□ 0.23
DDX56-202ENST00000415758 LEFTY2O00292 366 aa16.47■□□□□ 0.23
DDX56-202ENST00000415758 HCRTO43612 131 aa16.47■□□□□ 0.23
DDX56-202ENST00000415758 ATP2C2O75185 946 aa16.47■□□□□ 0.23
DDX56-202ENST00000415758 OLFM2O95897 454 aa16.47■□□□□ 0.23
DDX56-202ENST00000415758 KRT19P08727 400 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms