RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 TRIM49P0CI25 452 aa10.27□□□□□ -0.77
LINC01090-201ENST00000415357 TRIM49CP0CI26 452 aa10.27□□□□□ -0.77
LINC01090-201ENST00000415357 NPR3P17342 541 aa10.27□□□□□ -0.77
LINC01090-201ENST00000415357 CYP2F1P24903 491 aa10.27□□□□□ -0.77
LINC01090-201ENST00000415357 VARSP26640 1264 aaKnown RBP10.27□□□□□ -0.77
LINC01090-201ENST00000415357 GABRR2P28476 465 aa10.27□□□□□ -0.77
LINC01090-201ENST00000415357 VIPR2P41587 438 aa10.27□□□□□ -0.77
LINC01090-201ENST00000415357 RAP1GAPP47736 663 aa10.27□□□□□ -0.77
LINC01090-201ENST00000415357 LHX1P48742 406 aa10.27□□□□□ -0.77
LINC01090-201ENST00000415357 TUFMP49411 452 aaKnown RBP10.27□□□□□ -0.77
LINC01090-201ENST00000415357 CYP4F8P98187 520 aa10.27□□□□□ -0.77
LINC01090-201ENST00000415357 GRM2Q14416 872 aa10.27□□□□□ -0.77
LINC01090-201ENST00000415357 NFE2Q16621 373 aaPredicted RBP10.27□□□□□ -0.77
LINC01090-201ENST00000415357 WDR72Q3MJ13 1102 aa10.27□□□□□ -0.77
LINC01090-201ENST00000415357 ZCWPW2Q504Y3 356 aa10.27□□□□□ -0.77
LINC01090-201ENST00000415357 C1orf220Q5T0J3 134 aa10.27□□□□□ -0.77
LINC01090-201ENST00000415357 SCARA5Q6ZMJ2 495 aa10.27□□□□□ -0.77
LINC01090-201ENST00000415357 GAREM2Q75VX8 874 aa10.27□□□□□ -0.77
LINC01090-201ENST00000415357 LEMD2Q8NC56 503 aa10.27□□□□□ -0.77
LINC01090-201ENST00000415357 ZSCAN18Q8TBC5 510 aaPredicted RBP10.27□□□□□ -0.77
LINC01090-201ENST00000415357 C2orf15Q8WU43 125 aaKnown RBP10.27□□□□□ -0.77
LINC01090-201ENST00000415357 MYLPFQ96A32 169 aa10.27□□□□□ -0.77
LINC01090-201ENST00000415357 ASB16Q96NS5 453 aa10.27□□□□□ -0.77
LINC01090-201ENST00000415357 MKNK1Q9BUB5 465 aa10.27□□□□□ -0.77
LINC01090-201ENST00000415357 XYLT2Q9H1B5 865 aa10.27□□□□□ -0.77
LINC01090-201ENST00000415357 ATXN3LQ9H3M9 355 aa10.27□□□□□ -0.77
LINC01090-201ENST00000415357 DPEP3Q9H4B8 488 aa10.27□□□□□ -0.77
LINC01090-201ENST00000415357 SLITRK6Q9H5Y7 841 aa10.27□□□□□ -0.77
LINC01090-201ENST00000415357 SMYD3Q9H7B4 428 aa10.27□□□□□ -0.77
LINC01090-201ENST00000415357 PRM3Q9NNZ6 103 aa10.27□□□□□ -0.77
LINC01090-201ENST00000415357 CRTAC1Q9NQ79 661 aa10.27□□□□□ -0.77
LINC01090-201ENST00000415357 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.27□□□□□ -0.775e-6■■■■■ 59.3
LINC01090-201ENST00000415357 ARHGEF3Q9NR81 526 aa10.27□□□□□ -0.77
LINC01090-201ENST00000415357 HSFX1Q9UBD0 423 aa10.27□□□□□ -0.77
LINC01090-201ENST00000415357 NXF1Q9UBU9 619 aaKnown RBP10.27□□□□□ -0.77
LINC01090-201ENST00000415357 ASB3Q9Y575 518 aa10.27□□□□□ -0.77
LINC01090-201ENST00000415357 MUC6Q6W4X9 2439 aa10.26□□□□□ -0.77
LINC01090-201ENST00000415357 PI15O43692 258 aa10.26□□□□□ -0.77
LINC01090-201ENST00000415357 ECI2O75521 394 aa10.26□□□□□ -0.77
LINC01090-201ENST00000415357 MICAL2O94851 1124 aa10.26□□□□□ -0.77
LINC01090-201ENST00000415357 WARSP23381 471 aaKnown RBP10.26□□□□□ -0.77
LINC01090-201ENST00000415357 PCSK1P29120 753 aa10.26□□□□□ -0.77
LINC01090-201ENST00000415357 PRCPP42785 496 aa10.26□□□□□ -0.77
LINC01090-201ENST00000415357 CDH8P55286 799 aa10.26□□□□□ -0.77
LINC01090-201ENST00000415357 TNNC1P63316 161 aa10.26□□□□□ -0.77
LINC01090-201ENST00000415357 CLDN10P78369 228 aa10.26□□□□□ -0.77
LINC01090-201ENST00000415357 PTK2Q05397 1052 aa10.26□□□□□ -0.77
LINC01090-201ENST00000415357 SMARCB1Q12824 385 aa10.26□□□□□ -0.77
LINC01090-201ENST00000415357 NCOA4Q13772 614 aa10.26□□□□□ -0.77
LINC01090-201ENST00000415357 VEPH1Q14D04 833 aa10.26□□□□□ -0.77
LINC01090-201ENST00000415357 DDR2Q16832 855 aa10.26□□□□□ -0.77
LINC01090-201ENST00000415357 ZNF699Q32M78 642 aa10.26□□□□□ -0.77
LINC01090-201ENST00000415357 ISM2Q6H9L7 571 aa10.26□□□□□ -0.77
LINC01090-201ENST00000415357 DPH6Q7L8W6 267 aa10.26□□□□□ -0.77
LINC01090-201ENST00000415357 ITIH5Q86UX2 942 aa10.26□□□□□ -0.77
LINC01090-201ENST00000415357 SPATA2LQ8IUW3 424 aaPredicted RBP10.26□□□□□ -0.77
LINC01090-201ENST00000415357 SCN4BQ8IWT1 228 aa10.26□□□□□ -0.77
LINC01090-201ENST00000415357 FAM186BQ8IYM0 893 aa10.26□□□□□ -0.77
LINC01090-201ENST00000415357 OR6B3Q8NGW1 331 aa10.26□□□□□ -0.77
LINC01090-201ENST00000415357 FAM174AQ8TBP5 190 aa10.26□□□□□ -0.77
LINC01090-201ENST00000415357 SPATA18Q8TC71 538 aa10.26□□□□□ -0.77
LINC01090-201ENST00000415357 TMEM174Q8WUU8 243 aa10.26□□□□□ -0.77
LINC01090-201ENST00000415357 SMARCD2Q92925 531 aa10.26□□□□□ -0.77
LINC01090-201ENST00000415357 SMARCE1Q969G3 411 aa10.26□□□□□ -0.77
LINC01090-201ENST00000415357 ELSPBP1Q96BH3 223 aa10.26□□□□□ -0.77
LINC01090-201ENST00000415357 RSPRY1Q96DX4 576 aa10.26□□□□□ -0.77
LINC01090-201ENST00000415357 CCDC34Q96HJ3 373 aa10.26□□□□□ -0.77
LINC01090-201ENST00000415357 SDCBP2Q9H190 292 aa10.26□□□□□ -0.77
LINC01090-201ENST00000415357 MMRN2Q9H8L6 949 aa10.26□□□□□ -0.77
LINC01090-201ENST00000415357 SLC2A4RGQ9NR83 387 aa10.26□□□□□ -0.77
LINC01090-201ENST00000415357 WNT16Q9UBV4 365 aa10.26□□□□□ -0.77
LINC01090-201ENST00000415357 MAGED2Q9UNF1 606 aaPredicted RBP10.26□□□□□ -0.77
LINC01090-201ENST00000415357 FRMD4BQ9Y2L6 1034 aa10.26□□□□□ -0.77
LINC01090-201ENST00000415357 PCDHA5Q9Y5H7 936 aa10.26□□□□□ -0.77
LINC01090-201ENST00000415357 TACC1O75410 805 aa10.25□□□□□ -0.77
LINC01090-201ENST00000415357 STAU1O95793 577 aaKnown RBP10.25□□□□□ -0.77
LINC01090-201ENST00000415357 HMGA1P17096 107 aaKnown RBP10.25□□□□□ -0.77
LINC01090-201ENST00000415357 RFX1P22670 979 aa10.25□□□□□ -0.77
LINC01090-201ENST00000415357 BDNFP23560 247 aa10.25□□□□□ -0.77
LINC01090-201ENST00000415357 ATICP31939 592 aa10.25□□□□□ -0.77
LINC01090-201ENST00000415357 PLA2G5P39877 138 aa10.25□□□□□ -0.77
LINC01090-201ENST00000415357 PIK3CAP42336 1068 aa10.25□□□□□ -0.77
LINC01090-201ENST00000415357 ABL2P42684 1182 aa10.25□□□□□ -0.77
LINC01090-201ENST00000415357 GCLMP48507 274 aa10.25□□□□□ -0.77
LINC01090-201ENST00000415357 VAMP7P51809 220 aa10.25□□□□□ -0.77
LINC01090-201ENST00000415357 PMS1P54277 932 aaKnown RBP10.25□□□□□ -0.77
LINC01090-201ENST00000415357 CYP27A1Q02318 531 aa10.25□□□□□ -0.77
LINC01090-201ENST00000415357 PPP3CAQ08209 521 aa10.25□□□□□ -0.77
LINC01090-201ENST00000415357 TCF15Q12870 199 aa10.25□□□□□ -0.77
LINC01090-201ENST00000415357 ARID5BQ14865 1188 aa10.25□□□□□ -0.77
LINC01090-201ENST00000415357 TAF12Q16514 161 aa10.25□□□□□ -0.77
LINC01090-201ENST00000415357 NFIL3Q16649 462 aa10.25□□□□□ -0.77
LINC01090-201ENST00000415357 ZACNQ401N2 412 aa10.25□□□□□ -0.77
LINC01090-201ENST00000415357 MDH1BQ5I0G3 518 aa10.25□□□□□ -0.77
LINC01090-201ENST00000415357 GPR158Q5T848 1215 aa10.25□□□□□ -0.77
LINC01090-201ENST00000415357 ZNF658Q5TYW1 1059 aaPredicted RBP10.25□□□□□ -0.77
LINC01090-201ENST00000415357 SPOPLQ6IQ16 392 aa10.25□□□□□ -0.77
LINC01090-201ENST00000415357 FAM171BQ6P995 826 aa10.25□□□□□ -0.77
LINC01090-201ENST00000415357 VITQ6UXI7 678 aa10.25□□□□□ -0.77
LINC01090-201ENST00000415357 SV2AQ7L0J3 742 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms