RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 CYTH4Q9UIA0 394 aa14.08□□□□□ -0.16
CNN3-203ENST00000415017 MTUS1Q9ULD2 1270 aa14.08□□□□□ -0.16
CNN3-203ENST00000415017 EPN1Q9Y6I3 576 aaPredicted RBP14.08□□□□□ -0.16
CNN3-203ENST00000415017 ATP8B3O60423 1300 aa14.08□□□□□ -0.16
CNN3-203ENST00000415017 SOWAHDA6NJG2 315 aa14.07□□□□□ -0.16
CNN3-203ENST00000415017 HIDE1A8MVS5 230 aa14.07□□□□□ -0.16
CNN3-203ENST00000415017 HHLA1C9JL84 531 aa14.07□□□□□ -0.16
CNN3-203ENST00000415017 ARHGAP6O43182 974 aa14.07□□□□□ -0.16
CNN3-203ENST00000415017 GABBR2O75899 941 aa14.07□□□□□ -0.16
CNN3-203ENST00000415017 NDUFA10O95299 355 aa14.07□□□□□ -0.16
CNN3-203ENST00000415017 RPL17P18621 184 aaKnown RBP14.07□□□□□ -0.16
CNN3-203ENST00000415017 PLA2G4AP47712 749 aa14.07□□□□□ -0.16
CNN3-203ENST00000415017 KIF11P52732 1056 aa14.07□□□□□ -0.16
CNN3-203ENST00000415017 CACNA2D1P54289 1103 aa14.07□□□□□ -0.16
CNN3-203ENST00000415017 PTP4A2Q12974 167 aa14.07□□□□□ -0.16
CNN3-203ENST00000415017 MTF1Q14872 753 aa14.07□□□□□ -0.16
CNN3-203ENST00000415017 CLEC16AQ2KHT3 1053 aa14.07□□□□□ -0.16
CNN3-203ENST00000415017 GOLGA7BQ2TAP0 167 aa14.07□□□□□ -0.16
CNN3-203ENST00000415017 HS1BP3Q53T59 392 aa14.07□□□□□ -0.16
CNN3-203ENST00000415017 TDRD12Q587J7 1177 aaKnown RBP14.07□□□□□ -0.16
CNN3-203ENST00000415017 CLEC20AQ6ZU45 233 aa14.07□□□□□ -0.16
CNN3-203ENST00000415017 PHF13Q86YI8 300 aaPredicted RBP14.07□□□□□ -0.16
CNN3-203ENST00000415017 TCEAL8Q8IYN2 117 aa14.07□□□□□ -0.16
CNN3-203ENST00000415017 CEP295NLQ96MC4 621 aa14.07□□□□□ -0.16
CNN3-203ENST00000415017 SMOQ99835 787 aa14.07□□□□□ -0.16
CNN3-203ENST00000415017 SLC4A5Q9BY07 1137 aa14.07□□□□□ -0.16
CNN3-203ENST00000415017 TTYH1Q9H313 450 aaPredicted RBP14.07□□□□□ -0.16
CNN3-203ENST00000415017 ZNF576Q9H609 170 aa14.07□□□□□ -0.16
CNN3-203ENST00000415017 PNPLA8Q9NP80 782 aa14.07□□□□□ -0.16
CNN3-203ENST00000415017 NAGPAQ9UK23 515 aa14.07□□□□□ -0.16
CNN3-203ENST00000415017 PCDHB5Q9Y5E4 795 aa14.07□□□□□ -0.16
CNN3-203ENST00000415017 CLDN5O00501 218 aa14.06□□□□□ -0.16
CNN3-203ENST00000415017 C2CD2LO14523 706 aa14.06□□□□□ -0.16
CNN3-203ENST00000415017 TNFRSF10BO14763 440 aa14.06□□□□□ -0.16
CNN3-203ENST00000415017 XPO1O14980 1071 aaKnown RBP14.06□□□□□ -0.16
CNN3-203ENST00000415017 BEST1O76090 585 aa14.06□□□□□ -0.16
CNN3-203ENST00000415017 HAPLN1P10915 354 aaPredicted RBP14.06□□□□□ -0.16
CNN3-203ENST00000415017 NPR3P17342 541 aa14.06□□□□□ -0.16
CNN3-203ENST00000415017 TNFAIP3P21580 790 aa14.06□□□□□ -0.16
CNN3-203ENST00000415017 GABRB2P47870 512 aa14.06□□□□□ -0.16
CNN3-203ENST00000415017 BCAT1P54687 386 aa14.06□□□□□ -0.16
CNN3-203ENST00000415017 PDE4CQ08493 712 aa14.06□□□□□ -0.16
CNN3-203ENST00000415017 BST2Q10589 180 aaKnown RBP14.06□□□□□ -0.16
CNN3-203ENST00000415017 KCNC3Q14003 757 aa14.06□□□□□ -0.16
CNN3-203ENST00000415017 RAB41Q5JT25 222 aa14.06□□□□□ -0.16
CNN3-203ENST00000415017 TAF3Q5VWG9 929 aa14.06□□□□□ -0.16
CNN3-203ENST00000415017 ACAD10Q6JQN1 1059 aa14.06□□□□□ -0.16
CNN3-203ENST00000415017 RTL10Q7L3V2 364 aa14.06□□□□□ -0.16
CNN3-203ENST00000415017 TMEM110Q86TL2 294 aa14.06□□□□□ -0.16
CNN3-203ENST00000415017 SLC22A17Q8WUG5 538 aa14.06□□□□□ -0.16
CNN3-203ENST00000415017 ARNTL2Q8WYA1 636 aa14.06□□□□□ -0.16
CNN3-203ENST00000415017 KCTD13Q8WZ19 329 aa14.06□□□□□ -0.16
CNN3-203ENST00000415017 MRPL38Q96DV4 380 aaKnown RBP14.06□□□□□ -0.16
CNN3-203ENST00000415017 SMARCD1Q96GM5 515 aa14.06□□□□□ -0.16
CNN3-203ENST00000415017 C8orf48Q96LL4 319 aa14.06□□□□□ -0.16
CNN3-203ENST00000415017 CCDC42Q96M95 316 aa14.06□□□□□ -0.16
CNN3-203ENST00000415017 CERS4Q9HA82 394 aa14.06□□□□□ -0.16
CNN3-203ENST00000415017 IL37Q9NZH6 218 aa14.06□□□□□ -0.16
CNN3-203ENST00000415017 LMCD1Q9NZU5 365 aa14.06□□□□□ -0.16
CNN3-203ENST00000415017 REXO2Q9Y3B8 237 aaKnown RBP14.06□□□□□ -0.16
CNN3-203ENST00000415017 PCDHGC5Q9Y5F6 944 aa14.06□□□□□ -0.16
CNN3-203ENST00000415017 NCANO14594 1321 aa14.06□□□□□ -0.16
CNN3-203ENST00000415017 OBSL1O75147 1896 aa14.06□□□□□ -0.16
CNN3-203ENST00000415017 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.05□□□□□ -0.16
CNN3-203ENST00000415017 FAM92AA1XBS5 289 aa14.05□□□□□ -0.16
CNN3-203ENST00000415017 TULP2O00295 520 aa14.05□□□□□ -0.16
CNN3-203ENST00000415017 SOX1O00570 391 aaPredicted RBP14.05□□□□□ -0.16
CNN3-203ENST00000415017 RTN2O75298 545 aa14.05□□□□□ -0.16
CNN3-203ENST00000415017 SEC24AO95486 1093 aa14.05□□□□□ -0.16
CNN3-203ENST00000415017 ADH1AP07327 375 aa14.05□□□□□ -0.16
CNN3-203ENST00000415017 FAM200BP0CF97 657 aa14.05□□□□□ -0.16
CNN3-203ENST00000415017 CPB1P15086 417 aa14.05□□□□□ -0.16
CNN3-203ENST00000415017 MMP8P22894 467 aa14.05□□□□□ -0.16
CNN3-203ENST00000415017 BDNFP23560 247 aa14.05□□□□□ -0.16
CNN3-203ENST00000415017 CYP2F1P24903 491 aa14.05□□□□□ -0.16
CNN3-203ENST00000415017 CLCN4P51793 760 aa14.05□□□□□ -0.16
CNN3-203ENST00000415017 GSCP56915 257 aaPredicted RBP14.05□□□□□ -0.16
CNN3-203ENST00000415017 GFPT1Q06210 699 aaPredicted RBP14.05□□□□□ -0.16
CNN3-203ENST00000415017 C10orf76Q5T2E6 689 aa14.05□□□□□ -0.16
CNN3-203ENST00000415017 PPP1R2P3Q6NXS1 205 aa14.05□□□□□ -0.16
CNN3-203ENST00000415017 PMF1Q6P1K2 205 aa14.05□□□□□ -0.16
CNN3-203ENST00000415017 ALKBH5Q6P6C2 394 aaKnown RBP14.05□□□□□ -0.16
CNN3-203ENST00000415017 VPS36Q86VN1 386 aa14.05□□□□□ -0.16
CNN3-203ENST00000415017 SPATA2LQ8IUW3 424 aaPredicted RBP14.05□□□□□ -0.16
CNN3-203ENST00000415017 SCML4Q8N228 414 aa14.05□□□□□ -0.16
CNN3-203ENST00000415017 ATAD1Q8NBU5 361 aa14.05□□□□□ -0.16
CNN3-203ENST00000415017 TMEM35BQ8NCS4 154 aa14.05□□□□□ -0.16
CNN3-203ENST00000415017 GDPD5Q8WTR4 605 aa14.05□□□□□ -0.16
CNN3-203ENST00000415017 HDAC7Q8WUI4 952 aa14.05□□□□□ -0.16
CNN3-203ENST00000415017 SECISBP2LQ93073 1101 aaKnown RBP14.05□□□□□ -0.16
CNN3-203ENST00000415017 VCPIP1Q96JH7 1222 aa14.05□□□□□ -0.16
CNN3-203ENST00000415017 SPATA17Q96L03 361 aa14.05□□□□□ -0.16
CNN3-203ENST00000415017 HSFY1Q96LI6 401 aa14.05□□□□□ -0.16
CNN3-203ENST00000415017 EMILIN2Q9BXX0 1053 aa14.05□□□□□ -0.16
CNN3-203ENST00000415017 RHOBTB2Q9BYZ6 727 aa14.05□□□□□ -0.16
CNN3-203ENST00000415017 ENTPD7Q9NQZ7 604 aa14.05□□□□□ -0.16
CNN3-203ENST00000415017 TAS2R14Q9NYV8 317 aa14.05□□□□□ -0.16
CNN3-203ENST00000415017 HESX1Q9UBX0 185 aa14.05□□□□□ -0.16
CNN3-203ENST00000415017 FBXW11Q9UKB1 542 aa14.05□□□□□ -0.16
CNN3-203ENST00000415017 MYO16Q9Y6X6 1858 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms